mRNA_F-serratus_M_contig134.2532.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig134.2532.1
Unique NamemRNA_F-serratus_M_contig134.2532.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig134.2532.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig134contigF-serratus_M_contig134:545904..549778 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons6
Model size1459
Cds size1458
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig134.2532.1prot_F-serratus_M_contig134.2532.1Fucus serratus malepolypeptideF-serratus_M_contig134 545905..549778 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929317.0911176-CDS-F-serratus_M_contig134:545904..5461321622929317.0911176-CDS-F-serratus_M_contig134:545904..546132Fucus serratus maleCDSF-serratus_M_contig134 545905..546132 -
1690962796.3055184-CDS-F-serratus_M_contig134:545904..5461321690962796.3055184-CDS-F-serratus_M_contig134:545904..546132Fucus serratus maleCDSF-serratus_M_contig134 545905..546132 -
1622929317.1031384-CDS-F-serratus_M_contig134:546952..5470271622929317.1031384-CDS-F-serratus_M_contig134:546952..547027Fucus serratus maleCDSF-serratus_M_contig134 546953..547027 -
1690962796.31494-CDS-F-serratus_M_contig134:546952..5470271690962796.31494-CDS-F-serratus_M_contig134:546952..547027Fucus serratus maleCDSF-serratus_M_contig134 546953..547027 -
1622929317.1156635-CDS-F-serratus_M_contig134:547185..5473621622929317.1156635-CDS-F-serratus_M_contig134:547185..547362Fucus serratus maleCDSF-serratus_M_contig134 547186..547362 -
1690962796.3240936-CDS-F-serratus_M_contig134:547185..5473621690962796.3240936-CDS-F-serratus_M_contig134:547185..547362Fucus serratus maleCDSF-serratus_M_contig134 547186..547362 -
1622929317.129777-CDS-F-serratus_M_contig134:547680..5477971622929317.129777-CDS-F-serratus_M_contig134:547680..547797Fucus serratus maleCDSF-serratus_M_contig134 547681..547797 -
1690962796.3333461-CDS-F-serratus_M_contig134:547680..5477971690962796.3333461-CDS-F-serratus_M_contig134:547680..547797Fucus serratus maleCDSF-serratus_M_contig134 547681..547797 -
1622929317.1394007-CDS-F-serratus_M_contig134:548241..5484051622929317.1394007-CDS-F-serratus_M_contig134:548241..548405Fucus serratus maleCDSF-serratus_M_contig134 548242..548405 -
1690962796.3503675-CDS-F-serratus_M_contig134:548241..5484051690962796.3503675-CDS-F-serratus_M_contig134:548241..548405Fucus serratus maleCDSF-serratus_M_contig134 548242..548405 -
1622929317.1523666-CDS-F-serratus_M_contig134:549081..5497781622929317.1523666-CDS-F-serratus_M_contig134:549081..549778Fucus serratus maleCDSF-serratus_M_contig134 549082..549778 -
1690962796.361206-CDS-F-serratus_M_contig134:549081..5497781690962796.361206-CDS-F-serratus_M_contig134:549081..549778Fucus serratus maleCDSF-serratus_M_contig134 549082..549778 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig134.2532.1

>prot_F-serratus_M_contig134.2532.1 ID=prot_F-serratus_M_contig134.2532.1|Name=mRNA_F-serratus_M_contig134.2532.1|organism=Fucus serratus male|type=polypeptide|length=486bp
GDLHNGGNLRNFFTFSWAITTGSGSSSLSNKIKVAMARITTTNTSGSIGE
GLKGAQASAFLGEVHYSCCSKEHVHDGKATDAVGSKRWNVTKLAQAPGLI
ISGISFIPTFDVQLLPSIAQEFHEKILPVSSLSTEGTESVVTTIDNVTRG
CVPSERSRVSTPRSTSSPPLPPRPRDDFSDPKFFLKIPEVKFQMEAVRGC
VGVDMAAWFNLRGMWETQDLTAATQRAENLCAAEGAPSKTSRTSQPRLCG
TIATVRVTVEEMLQAVGETRRCSALFEIEADDMRVQKDHAFGDKKRIPAS
CNRLFQAEKSFSLIDDTVRDTAVSVECGRASVALVDDVSAAFSNSESSKD
CQLILGARGIRVTKVTEKGSLGTTTRVAMEISCEQVSGEESIGNTYRASI
ATLKNLSFAQLSIADSCVREEKLGVEGNANEGPQHNEKETLPTTKEVTPG
DAAIASTASRTLKHTRLLSPAAARGSGVKAQEIKVE
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mRNA from alignment at F-serratus_M_contig134:545904..549778-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig134.2532.1 ID=mRNA_F-serratus_M_contig134.2532.1|Name=mRNA_F-serratus_M_contig134.2532.1|organism=Fucus serratus male|type=mRNA|length=3875bp|location=Sequence derived from alignment at F-serratus_M_contig134:545904..549778- (Fucus serratus male)
GGAGATCTGCATAACGGAGGAAATTTGAGGAACTTTTTTACGTTTTCGTG
GGCCATTACGACGGGGAGCGGTAGTTCATCCCTCTCGAACAAGATCAAGG
TAGCTATGGCGAGAATTACGACAACCAATACCAGCGGGTCGATCGGGGAG
GGTTTGAAGGGGGCTCAGGCGTCAGCGTTCTTAGGCGAGGTTCATTATTC
CTGCTGCAGCAAGGAACACGTCCATGACGGAAAAGCTACTGACGCGGTCG
GTTCCAAGAGGTGGAACGTGACTAAACTGGCACAAGCGCCAGGCTTGATA
ATCAGTGGTATTTCCTTTATTCCCACTTTCGATGTTCAACTTCTTCCGTC
CATAGCCCAGGAATTTCACGAGAAGATCCTACCCGTATCTTCCCTGTCGA
CTGAGGGAACGGAAAGCGTTGTCACCACCATCGATAACGTTACCCGGGGT
TGTGTACCCTCGGAGCGATCGCGAGTTTCGACGCCAAGGAGCACGTCCTC
ACCGCCGCTGCCGCCACGACCCCGAGATGATTTTAGCGATCCAAAGTTTT
TTTTGAAGATCCCGGAGGTTAAGTTTCAAATGGAGGCAGTTCGGGGATGC
GTTGGTGTTGATATGGCTGCCTGGTTCAACCTGCGAGGGATGTGGGAGAC
GCAAGATTTGACGGCCGCCACCCAACGGGCCGAAAATCTGTGTGCGGGTG
AGTACTAAGAGCCAAGCCGAGCAGTTTCACCGGGTAGAAACTCTCTTTGG
TCAATGCAGCGAAATATCCTCTAGACCTTTGAAGTATACATTCAAATGGG
CGCAAATCACTCGTGCATTTCACGGTGATGAGATTGAGCTCGCGCGACGC
TCACGCATGGTGATGCACGTGCACCTCGACCAACCAAGTGCCTGGTCTGT
AAGGTAATGTACACTGAACGGGTTTGCGCGGGAGATGTAGTTGCTTGTCT
TGTGGCCCATGTTCGAATTATTCAAGTTGGACGCTGCAAGAATAACAAAA
TATTAGGGTTGTGTATCGATACCGATATCCGCCGATATATCGAGAGGTGA
TACCTCGATTTGTTTCCAGCTCCCCCCAGACGCCGAGGAGGACTAAAACA
CATACCCATTCGGTTTCACTGATATTCCAACGGTAGGTGATGCACCCCAG
GTTTCACAACTCCCATGTACATATTTCTTATTTATCGCAGTCATTTACTT
TTGATAATGTTACAACATCTCGTTGGATCTACTGCGAGGGCTGGTGTTGG
TGAAAGTGCGCATTTAATCTAATGCAAGAATAACAAGTCAAAATATCATA
TACTCCGTAGTTCATGAGCAACAAAACACATTTTCATGTATTTATTTATT
TTCCTGTTGGACGCTTAAAACAGCGGAAGGCGCGCCGTCGAAGACAAGCC
GCACCTCCCAGCCCCGCTTGTGCGGGACTATCGCGACCGTTAGGGTAACG
GTGGAAGAAATGCTTCAAGCCGTTGGCGAGACCAGAAGATGTTCGGCTCT
CTTTGAAATCGAAGCGGACGATATGCGAGTGCAGAAGGTGGATGGTGATC
ATCGTGTACAAAAACCTAGACTGTTGCGTACTCTGGTTGTCTACCTTGCA
TCGGGTCTGTCGTGGCTCCAGGTTTTCTATTGAACTGCTAGTCCAGTTCA
CTTGAATTGAACAAAGGATGTAGGTGAACAGGGTCCGAGTTATAGCAGAG
GGGACGTGATTCGGTCCAGTAGAGCCGAATATTCTTGTAGGCCGCGGGCT
CTCCAAGAGAAAACCACGCGTACTTGTCGCCAAGGAGATATCTTGTTCCT
CAATACACTCGCGCTCAGGCGATGGAGAGCCCCCCCTACAACACTTGTTT
ACTTTGGTGGCACTGACTGCGGCGCCCGGTCATTCCTCCCTTCCTTCCCC
CCTCCCTCCCCCGTCTCCCCTCCTCTCCGCAACTCCGGCCCTCACCGTCA
CAACCCCTGCCTCCACAAAACCGCGATCAAGGACCACGCTTTCGGTGACA
AGAAACGCATACCCGCGTCCTGCAACAGACTGTTCCAAGCTGAGAAATCA
TTCTCGTTGATCGATGACACGGTGCGCGACACTGCCGTATCGGTCGAGGT
GAGAGGAGTTCCGCACGTCAAGCTTTGCCCTTGTTGTTTTACTTGGTTGG
GAAACGCAGTCGTACGTACAGCACCGTGGTACGATACGTTTTTGCTGGGA
AAAATTGTCACCTTCACAAGCAAACTATCTCGGGGAAATACAGGCGCTTC
TGGGTGTTGATCGATCTCTCTGAGCTATGGTCTCGGTTTTGTGTTGCGTG
CCTTATGCACGCGACATATATTTGCTCACCTTTATGACCGCTCTATCCCC
CCCTCCCTAACTTCCCTATGTTCTATGTTTTTTCGGTACCTCGTGACATT
TTCTCCTTGGGGAAAGTGCGGCCGCGCAAGCGTTGCCCTTGTTGACGATG
TTTCCGCAGCATTTTCGAACTCCGAGAGCTCAAAAGATTGTCAGCTCATA
TTGGGCGCGCGGGGCATTAGGGTGACAAAAGTGACAGAGAAAGGGTCTCT
AGGAACGACAACGAGAGTCGCGATGGAGATATCATGCGAACAGGTGGGGG
AGGGACGTGTTATGGGGATCCTAACCAGCACGTTTGTACCGAGTATGACG
AATCGCTTCGTGTGTACGGCATATTGTATGTTGTTCCGTTATGAAACGGT
GACCTCAATAACTGTGTTGGTGACTATCGGGGATCATGCACTTTGCTGCA
GGTGTCGGGCGAAGAGAGTATTGGGAACACCTACCGTGCTTCTATCGCCA
CACTGAAGAACCTATCGTTTGCTCAGGTGCCACATTAGAAGGCGTGGGGA
AGGGGGCGTAGAGAGGGCCGCTTTGCATGATTTCGGGCGCGTGCCTAAAA
TAGGACACGCAAACGATGAAACCCTGCCCAACGACTTTTCAGTCAAAAAT
TTAGTTATGCGCTTAGCCGCGCTTTCACAATCGATCTTACGAGAGCCGGC
GTAAACGAAAAAAGATCTGTGGAAGTATGTTTAGCCTCTCATCTAGAGGG
GAACCCCCTGTCGAATGGTTAATCCTTATGAAAGGGTAAGGGTACACTGG
TTGTATCAGGAGCCCTGCTATTTTTTTACCCGTTTTTTTGCTTTTGTTTG
CATTACAATTCCTCATTTCCTCCCTGTTGAGCAACTTACAACCGAGACTG
GCGGCCTAAGCAGTCGTTAGCTGGTGTGTATGACGTCAATACTGTACGCG
ATATGTCCGCACTAGTCGCCCGAGTGGTCTAGTAGGCAACCTGCACACTT
GCTAGTGCGGAAGTCGTGAGTTCGACTCTTACCAAAGTAGGATTTGTGTT
CTTTTTTTCGTAACAGAAAGCGTGGGAACTTGAGGAAGTAATATTCAACC
ATTAGTTGACGAGTTGTAAGATTGCTGAACTTGCATCGCGATAAAAATTC
GTGAGGCGTGAACCAGGGAGAGGTGGGGAGATTCTTAGTGACCACAGGAA
GGATGGTGATAGTGAGGTCCATCAGCTATAAGTGAGACACAATAGCATAA
TAAGCGCCCAACATCGTCCCCAACACGTGGATAACCATTGCCTGAACAGC
TCCTCGCTTTGCCGTCGCTGCGCCCTCGCGGACGTTCCCCGTTCAGCTCT
CGATCGCGGATTCATGCGTCCGAGAGGAAAAACTCGGCGTTGAAGGCAAT
GCCAACGAGGGGCCCCAACATAATGAGAAAGAAACTCTACCTACGACAAA
AGAGGTTACCCCTGGAGATGCGGCGATTGCGTCAACAGCGTCGAGGACTC
TTAAGCACACGCGCCTACTCTCACCGGCGGCGGCTAGAGGGAGCGGGGTT
AAGGCGCAGGAGATAAAGGTCGAGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig134:545904..549778-

>mRNA_F-serratus_M_contig134.2532.1 ID=mRNA_F-serratus_M_contig134.2532.1|Name=mRNA_F-serratus_M_contig134.2532.1|organism=Fucus serratus male|type=CDS|length=2916bp|location=Sequence derived from alignment at F-serratus_M_contig134:545904..549778- (Fucus serratus male)
GGAGATCTGCATAACGGAGGAAATTTGAGGAACTTTTTTACGTTTTCGTG
GGCCATTACGACGGGGAGCGGTAGTTCATCCCTCTCGAACAAGATCAAGG
TAGCTATGGCGAGAATTACGACAACCAATACCAGCGGGTCGATCGGGGAG
GGTTTGAAGGGGGCTCAGGCGTCAGCGTTCTTAGGCGAGGTTCATTATTC
CTGCTGCAGCAAGGAACACGTCCATGACGGAAAAGCTACTGACGCGGTCG
GTTCCAAGAGGTGGAACGTGACTAAACTGGCACAAGCGCCAGGCTTGATA
ATCAGTGGTATTTCCTTTATTCCCACTTTCGATGTTCAACTTCTTCCGTC
CATAGCCCAGGAATTTCACGAGAAGATCCTACCCGTATCTTCCCTGTCGA
CTGAGGGAACGGAAAGCGTTGTCACCACCATCGATAACGTTACCCGGGGT
TGTGTACCCTCGGAGCGATCGCGAGTTTCGACGCCAAGGAGCACGTCCTC
ACCGCCGCTGCCGCCACGACCCCGAGATGATTTTAGCGATCCAAAGTTTT
TTTTGAAGATCCCGGAGGTTAAGTTTCAAATGGAGGCAGTTCGGGGATGC
GTTGGTGTTGATATGGCTGCCTGGTTCAACCTGCGAGGGATGTGGGAGAC
GCAAGATTTGACGGCCGCCACCCAACGGGCCGAAAATCTGTGTGCGGGGA
GATCTGCATAACGGAGGAAATTTGAGGAACTTTTTTACGTTTTCGTGGGC
CATTACGACGGGGAGCGGTAGTTCATCCCTCTCGAACAAGATCAAGGTAG
CTATGGCGAGAATTACGACAACCAATACCAGCGGGTCGATCGGGGAGGGT
TTGAAGGGGGCTCAGGCGTCAGCGTTCTTAGGCGAGGTTCATTATTCCTG
CTGCAGCAAGGAACACGTCCATGACGGAAAAGCTACTGACGCGGTCGGTT
CCAAGAGGTGGAACGTGACTAAACTGGCACAAGCGCCAGGCTTGATAATC
AGTGGTATTTCCTTTATTCCCACTTTCGATGTTCAACTTCTTCCGTCCAT
AGCCCAGGAATTTCACGAGAAGATCCTACCCGTATCTTCCCTGTCGACTG
AGGGAACGGAAAGCGTTGTCACCACCATCGATAACGTTACCCGGGGTTGT
GTACCCTCGGAGCGATCGCGAGTTTCGACGCCAAGGAGCACGTCCTCACC
GCCGCTGCCGCCACGACCCCGAGATGATTTTAGCGATCCAAAGTTTTTTT
TGAAGATCCCGGAGGTTAAGTTTCAAATGGAGGCAGTTCGGGGATGCGTT
GGTGTTGATATGGCTGCCTGGTTCAACCTGCGAGGGATGTGGGAGACGCA
AGATTTGACGGCCGCCACCCAACGGGCCGAAAATCTGTGTGCGGCGGAAG
GCGCGCCGTCGAAGACAAGCCGCACCTCCCAGCCCCGCTTGTGCGGGACT
ATCGCGACCGTTAGGGTAACGGTGGAAGAAATGCTTCAAGCCGTTGGCGA
GACCAGAAGATGTTCGGCTCTCTTTGAAATCGAAGCGGACGATATGCGAG
TGCAGAAGCGGAAGGCGCGCCGTCGAAGACAAGCCGCACCTCCCAGCCCC
GCTTGTGCGGGACTATCGCGACCGTTAGGGTAACGGTGGAAGAAATGCTT
CAAGCCGTTGGCGAGACCAGAAGATGTTCGGCTCTCTTTGAAATCGAAGC
GGACGATATGCGAGTGCAGAAGGACCACGCTTTCGGTGACAAGAAACGCA
TACCCGCGTCCTGCAACAGACTGTTCCAAGCTGAGAAATCATTCTCGTTG
ATCGATGACACGGTGCGCGACACTGCCGTATCGGTCGAGGACCACGCTTT
CGGTGACAAGAAACGCATACCCGCGTCCTGCAACAGACTGTTCCAAGCTG
AGAAATCATTCTCGTTGATCGATGACACGGTGCGCGACACTGCCGTATCG
GTCGAGTGCGGCCGCGCAAGCGTTGCCCTTGTTGACGATGTTTCCGCAGC
ATTTTCGAACTCCGAGAGCTCAAAAGATTGTCAGCTCATATTGGGCGCGC
GGGGCATTAGGGTGACAAAAGTGACAGAGAAAGGGTCTCTAGGAACGACA
ACGAGAGTCGCGATGGAGATATCATGCGAACAGTGCGGCCGCGCAAGCGT
TGCCCTTGTTGACGATGTTTCCGCAGCATTTTCGAACTCCGAGAGCTCAA
AAGATTGTCAGCTCATATTGGGCGCGCGGGGCATTAGGGTGACAAAAGTG
ACAGAGAAAGGGTCTCTAGGAACGACAACGAGAGTCGCGATGGAGATATC
ATGCGAACAGGTGTCGGGCGAAGAGAGTATTGGGAACACCTACCGTGCTT
CTATCGCCACACTGAAGAACCTATCGTTTGCTCAGGTGTCGGGCGAAGAG
AGTATTGGGAACACCTACCGTGCTTCTATCGCCACACTGAAGAACCTATC
GTTTGCTCAGCTCTCGATCGCGGATTCATGCGTCCGAGAGGAAAAACTCG
GCGTTGAAGGCAATGCCAACGAGGGGCCCCAACATAATGAGAAAGAAACT
CTACCTACGACAAAAGAGGTTACCCCTGGAGATGCGGCGATTGCGTCAAC
AGCGTCGAGGACTCTTAAGCACACGCGCCTACTCTCACCGGCGGCGGCTA
GAGGGAGCGGGGTTAAGGCGCAGGAGATAAAGGTCGAGCTCTCGATCGCG
GATTCATGCGTCCGAGAGGAAAAACTCGGCGTTGAAGGCAATGCCAACGA
GGGGCCCCAACATAATGAGAAAGAAACTCTACCTACGACAAAAGAGGTTA
CCCCTGGAGATGCGGCGATTGCGTCAACAGCGTCGAGGACTCTTAAGCAC
ACGCGCCTACTCTCACCGGCGGCGGCTAGAGGGAGCGGGGTTAAGGCGCA
GGAGATAAAGGTCGAG
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