prot_F-serratus_M_contig1336.2496.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1336.2496.1
Unique Nameprot_F-serratus_M_contig1336.2496.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length113
Homology
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BLAST of mRNA_F-serratus_M_contig1336.2496.1 vs. uniprot
Match: D7G1X1_ECTSI (DEAD box helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1X1_ECTSI)

HSP 1 Score: 89.4 bits (220), Expect = 1.940e-18
Identity = 37/59 (62.71%), Postives = 48/59 (81.36%), Query Frame = 0 
Query:   16 MTRKRNRGSSGGMSKWDSMPWKSIEPTLQPDDGWQSTSGEDQALLYSLEEISGGDYALQ 74
            M+RKR R  +GG  +WD++PWK+IEP L+ DDGWQ  +GE+QALLY+LEEISG DY L+
Sbjct:    1 MSRKRGRKGAGGGQRWDALPWKTIEPPLERDDGWQGMAGEEQALLYTLEEISGNDYCLR 59
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1336.2496.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G1X1_ECTSI1.940e-1862.71DEAD box helicase n=1 Tax=Ectocarpus siliculosus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1336contigF-serratus_M_contig1336:121644..123227 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1336.2496.1mRNA_F-serratus_M_contig1336.2496.1Fucus serratus malemRNAF-serratus_M_contig1336 121644..123227 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1336.2496.1 ID=prot_F-serratus_M_contig1336.2496.1|Name=mRNA_F-serratus_M_contig1336.2496.1|organism=Fucus serratus male|type=polypeptide|length=113bp
PGLELFEEIVTIAEAMTRKRNRGSSGGMSKWDSMPWKSIEPTLQPDDGWQ
STSGEDQALLYSLEEISGGDYALQCASGGNTDGGRPGRAGGGDNGSEGAA
TRSAGSPAGDFKG
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