mRNA_F-serratus_M_contig1015.248.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A6H5JRA9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRA9_9PHAE) HSP 1 Score: 266 bits (680), Expect = 4.610e-79 Identity = 132/188 (70.21%), Postives = 149/188 (79.26%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSDGATAYSV 564 GKS+LRADFRIEC T H Y+IYAA+MI +YPLGIPAAF YFL RQRSRINPP D+G + QRG H EK+ +R D +APTSFLW AYYPNRYYYEV EC+RRLLLTGLLVFV P T QVA+ C+FAFLSL FE+LRPH D L+ LYRTGCLVIFF NFLAL+IKANVA+ DS G+ YSV Sbjct: 1653 GKSFLRADFRIECDTPKHDNYKIYAAVMICIYPLGIPAAFWYFLRRQRSRINPPTDKGLKDQRGRKHVVEEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFVVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVANPDSRGSAVYSV 1840
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: D7G119_ECTSI (Asn/thr-rich large protein family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G119_ECTSI) HSP 1 Score: 249 bits (635), Expect = 5.090e-73 Identity = 121/188 (64.36%), Postives = 146/188 (77.66%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSDGATAYSV 564 GKSYLRADFRIEC TQ H Y+ YA +MI +YPLGIPA F YFL RQRSRINPP D+ +++RG H +K+ R+ D ++APTSFLW+AY+P YYYEV EC+RRLLLTG+LVF+ P T QVA+SC+FA +SL FE+LRPH + L+R LYRTGCLVI F NFLALVIK+ AD DS G+ AYSV Sbjct: 1225 GKSYLRADFRIECDTQRHTLYKAYAGVMICIYPLGIPAIFFYFLVRQRSRINPPTDEALKKRRGGRHVAEQKMTVRDQDQSIAPTSFLWSAYFPTCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAIVSLMVFELLRPHVNNLDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSV 1412
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: D7G0B0_ECTSI (Adhesin-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0B0_ECTSI) HSP 1 Score: 241 bits (615), Expect = 2.520e-70 Identity = 123/188 (65.43%), Postives = 141/188 (75.00%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSDGATAYSV 564 GKS+LRADFRIEC T H Y+IYAA+MI + +F YFL RQRSRINPP D+G + QRG H EK+ +R D +APTSFLW AYYPNRYYYEV EC+RRLLLTGLLVF+ P T QVA+ C+FAFLSL FE+LRPH D L+ LYRTGCLVIFF NFLAL+IKANVA DS G+ YSV Sbjct: 1454 GKSFLRADFRIECDTPKHDNYKIYAAVMICI-------SFWYFLTRQRSRINPPTDKGLKDQRGRKHVVDEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECMRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLAFELLRPHTDHLDMQLYRTGCLVIFFTNFLALMIKANVASPDSRGSEVYSV 1634
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A6H5K4A5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4A5_9PHAE) HSP 1 Score: 241 bits (614), Expect = 3.420e-70 Identity = 118/188 (62.77%), Postives = 142/188 (75.53%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSDGATAYSV 564 GK YLRADF IEC TQ H Y+ YA +M+ +YPLGIPA F YFL RQRSRINPP D+ +++RG H K+ R+ D ++APTSFLW AY+P YYYEV EC+RRLLLTG+LVF+ P T QVA+SC+FA LSL FE+LRPH + ++R LYRTGCLVI F NFLALVIK+ AD DS G+ AYSV Sbjct: 1458 GKRYLRADFGIECDTQRHTLYKAYAGVMMCIYPLGIPAVFLYFLLRQRSRINPPTDEALKKRRGGRHVVERKMTVRDKDQSIAPTSFLWNAYFPKCYYYEVFECIRRLLLTGILVFLVPDTPGQVAFSCIFAILSLMVFELLRPHVNHIDRQLYRTGCLVILFTNFLALVIKSGAADKDSSGSAAYSV 1645
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A6H5JI42_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI42_9PHAE) HSP 1 Score: 229 bits (585), Expect = 9.150e-68 Identity = 119/188 (63.30%), Postives = 136/188 (72.34%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSDGATAYSV 564 GKS+LRADFRIEC H Y+IYAA+MI +YPLGIP AF YFLARQ SRINPP D+G + QRG H + EK+ +R D +APTSFLW AYYP+RYYYEV EC RRLLLTGLLVF+ P T QVA+ C+FAFLSL FE+LRPH D L+ LYRTGCLVIF N LA NVA S YS+ Sbjct: 387 GKSFLRADFRIECDKPKHYTYKIYAAVMICIYPLGIPGAFCYFLARQMSRINPPTDKGLKNQRGRKH-DAEKMNQRRTDRAIAPTSFLWNAYYPSRYYYEVIECFRRLLLTGLLVFLVPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRTGCLVIFLTNSLA-----NVASPCSRSCEVYSI 568
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: D7G0A8_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0A8_ECTSI) HSP 1 Score: 214 bits (545), Expect = 6.330e-61 Identity = 106/156 (67.95%), Postives = 120/156 (76.92%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRT 468 GKS+LRADFRIEC T H Y+ YAA MI +YPLGIPAAF YFL RQ SRINPP D+G + QRG H EK+ +R D +APTSFLW AYYPNRYYYEV ECLRRLLLTGLLVF++P T QVA+ C+FAFLSL FE+LRPH D L+ LYRT Sbjct: 1187 GKSFLRADFRIECDTPKHDNYKTYAAAMICIYPLGIPAAFCYFLTRQMSRINPPTDKGLKNQRGRKHVVTEKMNQRRTDRAIAPTSFLWNAYYPNRYYYEVFECLRRLLLTGLLVFLAPDTPGQVAFGCVFAFLSLLVFELLRPHTDHLDMQLYRT 1342
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: D7FRH4_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH4_ECTSI) HSP 1 Score: 186 bits (471), Expect = 5.700e-51 Identity = 95/194 (48.97%), Postives = 128/194 (65.98%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQ-RQRGEDHGNR-----------EKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADSDG 546 GKSYLRAD+ I+C+T H+ Y++YA +MI VYP+GIP + + L + R +NP + G+ R + +R EK+EKR +P + P+ FLW + P YYYEV EC RR+LLTG+LVF+SP T QVA +C+FAF+SL GFE+LRPH D ++ LYR GCL IF +NFLAL+IK D+ DG Sbjct: 1243 GKSYLRADYSIQCHTDKHEWYKVYAGVMIMVYPVGIPLLYAFILWQNRESLNPRVKTGAVVNPRADGSTDRITYKANSEDLEEKLEKRRRNPDLIPSMFLWKDFGPEIYYYEVVECGRRILLTGVLVFISPNTAAQVAAACMFAFVSLLGFELLRPHLDPVDSWLYRLGCLCIFLSNFLALLIKV---DSGVDG 1433
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: D7FRH0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRH0_ECTSI) HSP 1 Score: 178 bits (451), Expect = 2.790e-48 Identity = 90/189 (47.62%), Postives = 124/189 (65.61%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINP--------PID-QGSQRQRGEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVADADS 540 G+S+LRAD+ I C T H YE+YA +MI VYP+GIP + + L R R +NP +D + S+ R + ++++EKR +P + P+ FLW + P+ YYYEV EC RR+LLTG L+F++P T Q A +C+FAF SL GFE+LRPH D + LYR GC+VIF +NFLAL+IKA+ A S Sbjct: 1326 GESFLRADYGISCKTNKHAWYEVYAGVMIAVYPIGIPLLYAFILWRNRDSLNPRAYYSTGLELDGEMSEGPRETEEELQDRLEKRRQNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGALIFIAPHTVAQAAIACMFAFASLLGFELLRPHLDPADSWLYRLGCVVIFLSNFLALLIKADTAGEGS 1514
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: A0A6H5JS31_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS31_9PHAE) HSP 1 Score: 172 bits (436), Expect = 2.890e-46 Identity = 86/191 (45.03%), Postives = 120/191 (62.83%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINPPIDQGSQRQR---------------GEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVA 528 G+SYLRAD+ + C T H + IYA +MI VYP+GIP + + L R +NP + + Q G+D E++E+R N+P + P+ FLW + P+ YYYEV EC RR+LLTG+L+F + GT Q A +C+FAF+SL GFE+LRPH D + LYR GC++IF +NFLAL+IK + A Sbjct: 1271 GESYLRADYSLSCKTDKHMYFRIYAGIMILVYPIGIPLLYAFILWINRESLNPRVRSEATPQPTGGVEMDVALVPANYGDDL--EERLEQRRNNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADAWLYRLGCVIIFLSNFLALLIKVDAA 1459
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Match: D7FRH1_ECTSI (Polymorphic outer membrane protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRH1_ECTSI) HSP 1 Score: 171 bits (434), Expect = 5.240e-46 Identity = 85/189 (44.97%), Postives = 120/189 (63.49%), Query Frame = 1 Query: 1 GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRINP-------PIDQGSQRQR------GEDHGNREKVEKRNNDPTVAPTSFLWAAYYPNRYYYEVCECLRRLLLTGLLVFVSPGTGVQVAYSCLFAFLSLFGFEMLRPHADRLERMLYRTGCLVIFFNNFLALVIKANVA 528 G+SYLRAD+ + C T H Y IYA +MI VYP+GIP + + L R +NP P G+ ++ G +E++++R +P + P+ FLW + P+ YYYEV EC RR+LLTG+L+F + GT Q A +C+FAF+SL GFE+LRPH D + LYR GC++IF +NFLAL+IK + A Sbjct: 929 GESYLRADYSLSCKTDKHMYYRIYAGIMIVVYPIGIPLLYAFILWINRDSLNPRVRSEAIPQPTGAVEKKVSLVPANYGDGLQERLDQRRRNPDLVPSMFLWKDFGPDMYYYEVIECGRRILLTGVLIFFAAGTAAQAAMACIFAFVSLLGFELLRPHLDPADMWLYRLGCVIIFLSNFLALLIKVDAA 1117 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1015.248.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1015.248.1 >prot_F-serratus_M_contig1015.248.1 ID=prot_F-serratus_M_contig1015.248.1|Name=mRNA_F-serratus_M_contig1015.248.1|organism=Fucus serratus male|type=polypeptide|length=189bp GKSYLRADFRIECYTQTHKAYEIYAAMMIFVYPLGIPAAFGYFLARQRSRback to top mRNA from alignment at F-serratus_M_contig1015:143846..146399- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1015.248.1 ID=mRNA_F-serratus_M_contig1015.248.1|Name=mRNA_F-serratus_M_contig1015.248.1|organism=Fucus serratus male|type=mRNA|length=2554bp|location=Sequence derived from alignment at F-serratus_M_contig1015:143846..146399- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1015:143846..146399- >mRNA_F-serratus_M_contig1015.248.1 ID=mRNA_F-serratus_M_contig1015.248.1|Name=mRNA_F-serratus_M_contig1015.248.1|organism=Fucus serratus male|type=CDS|length=1134bp|location=Sequence derived from alignment at F-serratus_M_contig1015:143846..146399- (Fucus serratus male)back to top |