mRNA_F-serratus_M_contig133.2459.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: D8LH05_ECTSI (Cryptic tubulin n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LH05_ECTSI) HSP 1 Score: 516 bits (1330), Expect = 3.850e-174 Identity = 329/642 (51.25%), Postives = 385/642 (59.97%), Query Frame = 1
Query: 1 MSCIHLHLGQAGNQIGKSFWGLAEEEFLDDE-----SGEGSRAFQPPRARVGRPSRKQTTRFLRPGGTAMFHEDNS-ARCLAVDSEPKVVRSFQQHVSSLRPENAIISQSGLANNWAMGFASCRSDGGEGRDGTKGGLFDRCMEGMRKEAERSCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPFRSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLLLGAKTAA---TAARRNPSGIGEGIILGGGDKGGTGGS-FRPASLLSSGSSAST---------ASRTR-AVSTTDMNESFSLDMGSYFFPTSRSVHLDCFTPRGMRPPPPFRAQKIARSNRRHSDHEGAMIHRDFDGGSLMVAACPLPSAKFVDLRSSISV-----DRGS------SLSSVGAAATG--DWTSLVGRLAKVAPVCPRKGLARADDVCIAAHHVVRGAASGTGAAHFSDSRTSGVKSTRRGEGGDKEARGSTAAMEASAMAETS----------------STVGNALRKHHECREWRTVTDVSSLP---------------ALRCREVVRSITTVCNQTRIRAVLGDVLSRAEEKFSVGAYLHWYYRHGLEEEDFLTAFEAVRTVEQSYDALARSFDGSTG 1734
MSCIHLHLGQAG Q+G+SFW LAEEEFL D+ G+GS + + R PSRK R +RPGGTAMFHED+ ARCL VDSEPKVV+ FQ + SLRPENAI SQSGLANNWAMGFASCRSD G +G F RCMEGMRKEAERSCWLNS V+THSLAGGTGSG+G+GLLQALRDEYPSLYLIS CVGPF +G+TPLQHYNSAL+L HLQA+AD VIYRGNDDLL GA A+ +AA +P+ GG + G G + +RP +LS + + R R VST DMN S SLDM SYFFPTSR D F P PP + + M R FDGGSLM AA PLP+AKFVDLRS++S D G S SS+ +++T DW +L + P+CPR+ DD C+AAHH++RGA G G ALR+HHEC++WRT +DVS P ALR + V+RS+TTVCNQTRIR VL DV+ RAE KF AYLHWYYRHGLE+EDFL AFE VRTVE+ YD LAR+F S+G
Sbjct: 1 MSCIHLHLGQAGIQLGESFWRLAEEEFLVDDVRAGGGGDGSYSGRGS-GRAALPSRKPPMRRMRPGGTAMFHEDDGWARCLVVDSEPKVVQGFQGRLESLRPENAIYSQSGLANNWAMGFASCRSDV-RGEEGP----FSRCMEGMRKEAERSCWLNSAVMTHSLAGGTGSGLGSGLLQALRDEYPSLYLISACVGPFGTGDTPLQHYNSALALQHLQAYADCVIYRGNDDLLRGAAEASARISAATSSPAVSDSRWAASGGPRSGGGAAGWRPVGVLSRHGGSXXXXXXXXXXXSGRGRMVVSTADMNASLSLDMASYFFPTSRP--FDRFQPA----PPTVEGRPRSHQQXXXXXXXXEMAQRPFDGGSLMAAAVPLPAAKFVDLRSTLSAGPLASDSGGIGQGLFSSSSLPSSSTTKKDWAALANDHGRKVPLCPRRAGGLDDDACVAAHHLIRGATFGAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQEAGEALRRHHECQKWRTASDVSCAPGCAQHSEWVRTLVHSALRSQGVLRSVTTVCNQTRIRGVLRDVVKRAEGKFRARAYLHWYYRHGLEDEDFLAAFEGVRTVERGYDGLARAFGCSSG 630
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: A0A4D9CQS6_9STRA (Tubulin delta chain n=5 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CQS6_9STRA) HSP 1 Score: 194 bits (493), Expect = 4.960e-51 Identity = 196/642 (30.53%), Postives = 275/642 (42.83%), Query Frame = 1
Query: 10 IHLHLGQAGNQIGKSFWGLAEEEFLDDESGEGSRAFQPPRARVGRPSRKQTTRFLRPGGTAMFHE-DNSARCLAVDSEPKVVRSFQQH---VSSLRPENAIISQSGLANNWAMGFASCRSDGGEGRDGTKGGLFDRCMEGMRKEAERSCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPFRSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLLLGAKTAATAA----RRNPSGIGEGIILGGGDKGGTGGSFRPASLLSSGSSASTASRTRAVSTTDMNESFSLDMGSYFFPTSRSVHLDCFTPRGMRPPPPFRAQKIARSNRRHSDHEGAMIHRDFDGGSLMVAACPLPSAKFVDLRSSISVDRGSSL--SSV------------------GAAATGDWTSLVGRLAK--VAPVCPRKGLARADDVCIAAHHVVRGA-ASGTGAAHFSDSRTSGVKSTRRGEGGDKEARGSTAAMEASAMAETSSTV--------GNALRKHHECRE------WR---------------TVTDVSSLPALRCREVVRSITTVC-NQTRIRAVLGDVLSRAEEKFSVGAYLHWYYRHGLEEEDFLTAFEAVRTVEQSYDALA----RSFDGSTGRR 1740
+H+H+GQ GNQIG+ FW LA ++F + +F P ++ P +FHE D A + VDSE KVV +++ S LR E I SG ANNWAMGF S + +GR GLF + +R+E ER L S+V+ HSLAGGTG+G+G+ L Q LR+ PS+ + + VGPF +G+ Q YNSAL+L+ L AD ++YR ND LL A AA RR SG G G+ L T S +NES + D+ FPT S + G +R +D +L P AKFVD RSS S S+L SSV G A G W + K +A G +A+ V +AA VRG GTG H + RG+GG +++ + +TS+ G HH+ WR ++ +S+PA R +C N+T + + + +L RAEE AYLHW++R+G+E++DF AFE +R V++ YD L R+ +GRR
Sbjct: 6 LHVHIGQCGNQIGEHFWSLAADDFAAAADNGDASSFSP--------------QYPHP----LFHEQDGRAAAVFVDSEAKVVDRLRKNSRLASVLRKEACITDSSGRANNWAMGFTSSCKELAQGR-----GLFYSTVNVLRRELERIDSLQSLVIYHSLAGGTGAGVGSALFQYLREACPSVNITTCSVGPFSTGDCATQWYNSALTLNALSEHADTILYRDNDQLLGEYLRVAGAAQGTGRRGMSG-GRGLAL----------------------------ATSKASMGRLNESLAADLACLLFPTVTSPSIPTC---------------------------GGGGYRAWDALALQHDCTPFKYAKFVDNRSSWSASAASTLPTSSVPFKAAAGHGLHHVPDGRLGGAGGGQWADECVYVGKDVIASFPTEDGRGKAN-VTLAAQMTVRGVDLPGTGP-HVPGQEQVSLSEHPRGKGGPQKSGQCRNSNRNHQKPQTSNPYLPPTPWHPGLTAFLHHDLPRALRLPSWRQGSAIGTVFSSHSQPSILPCTSVPAARPFSSSSPGVAICANRTHMSSTVEKILGRAEEMAEHRAYLHWFHRYGIEDDDFTAAFEGLRRVKEEYDELGAESDRALRAMSGRR 566
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: A0A8K1FBW7_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FBW7_PYTOL) HSP 1 Score: 181 bits (460), Expect = 1.040e-46 Identity = 175/614 (28.50%), Postives = 257/614 (41.86%), Query Frame = 1
Query: 10 IHLHLGQAGNQIGKSFWGLAEEEFLDDESGEGSRAFQPPRARVGRPSRKQTTRFLRPGGTAMFH-EDNSARCLAVDSEPKVVRSF---QQHVSS-----LRPENAIISQSGLANNWAMGF---------ASCRSDGG----------------EGRDGTKGGLFDRCMEGMRKEAERSCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPF-RSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLLLGAKTAATAARRNPSGIGEGIILGGGDKGGTGGSFRPASLLSSGSSASTASRTRAVSTTDMNESFSLDMGSYFFPTSRSVHLDCFTPRGMRPPPPFRAQKIARSNRRHSDHEGAMIHRDFDGGSLMVAACPLPSAKFVDLRSSISVDRGSSLSSVGAAATGD-WTSLVGRLAKVAPVCPRKGLARADDV---------CIAAHHVVRGAASGTGAAHFSDSRTSGVKSTRRGEGGDKEARGSTAAMEASAMAETSSTVGNALRKHHECREWRTVTDVSSLPALRCREVVRSITTVCNQTRIRAVLGDVLSRAEEKFSVGAYLHWYYRHGLEEEDFLTAFEAVRTVEQSYDALARS 1716
I +H+GQ GNQ+G +FW L E + + S + + +A R RK+T L ++H + ARC+ VD+EPKV+RS +QH ++ P + QSG NNWAMG+ +SD E R K L + ME ++KE E +V+ HSL GGTGSG+G +L+ +RD YP YL + + P SG+TPLQ+YN+ +L HLQ +AD VIY+ NDDLL A T ++ S G +G ++G T + + S ++N + D+ Y FP S T G R + + FD G L+ + CPLPSAKFVD+R+ I DR ++ + + +++GR R+ L + C+A +VRG A G D +G+ A S + +A + R SS S++ N +R+ + L R +F AY+HWY +HGLEE DF AF+ + Q YDAL S
Sbjct: 3 IFVHVGQCGNQVGDAFWRLTESVYEAPATSTASLSAK--QAAASRARRKETPPTLY--REQLYHPQSGKARCILVDTEPKVIRSMLEARQHKATGSGSVFVPAHVHFEQSGRGNNWAMGYNLQTHRHNVLPSKSDASSMVPLTGTHKTKRVVIESRS-AKQELLEMVMESLQKEIEGLDCYQGVVLMHSLGGGTGSGLGCRVLETIRDTYPRSYLTTVSIAPSCASGDTPLQNYNALFTLGHLQEYADCVIYKENDDLLRTASYWKTLRDQSQSNASPGREMG--EEGLT--------------------KAKKTSLQELNALAAADVAGYLFPIVAS------TSAGSR---------------------SIQMAKPFDAGKLVSSCCPLPSAKFVDIRTGIVCDRQATQRKPSVGSVDPLFHTVIGRTNDTLDAAARRLLQQTTQSFPRSSTMLPCLATSAMVRGFA-----------------------GSDLTEKGTQA---------LSQQLASAFPRAAWTRISSEGITYSSYSPFGPYSGKASVSICVNNGHVRSSVRHFLDRGRRQFQAKAYVHWYTQHGLEEADFERAFDQGTKIVQEYDALLPS 530
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: A0A6G0XWW9_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWW9_9STRA) HSP 1 Score: 166 bits (421), Expect = 2.720e-42 Identity = 163/576 (28.30%), Postives = 232/576 (40.28%), Query Frame = 1
Query: 10 IHLHLGQAGNQIGKSFWGLAEEEFLDDESGEGSRAFQPPRARVGRPSRKQTTRFLRPGGTAMFHEDNSARCLAVDSEPKVVRSFQ--QHVSSLRPENAIISQSGLANNWAMGFASCRSDGGEGRDGTKGGLFDRCMEGMRKEAER-SCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPFRSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLLLGAKTAATAARRNPSGIGEGIILGGGDKGGTGGSFRPASLLSSGSSASTASRTRAVSTTDMNESFSLDMGSYFFPTSRSVHLDCFTPRGMRPPPPFRAQKIARSNRRHSDHEGAMIHRDFDGGSLMVAACPLPSAKFVDLRSS--ISVDRGSSLSSVGAAATGDWTSLVGRLAKVAPVCPRKGLARADDVCIAAHHVVRGAASGTGAAHFSDSRTSGVKSTRRGEGGDKEARGSTAAMEASAMAETSSTVGNALRKHHECREWRTVT---DVSSLPALRCREVVRSITTVCNQTRIRAVLGDVLSRAEEKFSVGAYLHWYYRHGLEEEDFLTAFEAVRTVEQSYDALAR 1713
+ +++GQ GNQ+G + LA++ P K+ + L RC+ VD+EPKVVRS Q +VS++ E QSG N WAMG+ +S L R ME +R+E E C+ S ++ HSLAGGTGSG+G LL+ +R YP YL+S CV P G+TPLQ+YN+ +L HLQ F DAV+++ NDDLL + R S +P + +S G ++N S + D FPT +S + R FD GS + CPLP AKFVD+RS+ IS R S + A+ D L +L + P R + I H V RG F D ++ + +A+RK C +W + +SS P V+ S+T N T I VL L RA +F AYLHWY + G+++ F +F + + YD L +
Sbjct: 3 VFINVGQCGNQVGAALMALAKD-----------------------PQGKKRSEHL--------------RCILVDTEPKVVRSIQFPANVSAVHME-----QSGRGNLWAMGYNKTKSKE----------LCARVMESLRREIEAMDCYRGSFLL-HSLAGGTGSGLGCRLLEKIRGAYPKAYLVSGCVAPSLRGDTPLQNYNALFTLRHLQDFTDAVLFKDNDDLL----RTVSYWRGTQS--------------------KPKTSVSLG---------------EINASLAADWAGLLFPTIQSK-----------------------------------LRRVFDIGSFVTRVCPLPEAKFVDVRSAYYISKARSVSFAQFSTASHQDVMPLARQLVESFP--------RTASLAIGQHVVARG---------FKD--------------------------------QSMTAAADAMRKGVRCADWGVPSPSLQLSSSPL--ASSVLSSLTMCSNGTNIAPVLRTYLDRASTQFQARAYLHWYEKFGVDKAYFEESFGKTEDILRHYDTLTQ 400
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: V9FMD9_PHYPR (Tubulin domain-containing protein n=10 Tax=Phytophthora TaxID=4783 RepID=V9FMD9_PHYPR) HSP 1 Score: 166 bits (419), Expect = 4.200e-41 Identity = 178/602 (29.57%), Postives = 262/602 (43.52%), Query Frame = 1
Query: 10 IHLHLGQAGNQIGKSFWGLAEE--EFLDDESGEG----SRAFQPPRARVGRPSR----KQTTRFLRPGGTAMFHEDN-SARCLAVDSEPKVVRSFQQHVS----SLRPENAIISQSGLANNWAMGFASCRSDGGEGRDGTKGGLFDR------CMEGMRKEAER-SCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPF-RSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLLLGAKTAATAARRNPSGIGEGIILGGGDKGGTGGSFRPASLLSSGSSASTASRTRAVSTTDMNESFSLDMGSYFFPTSRSVHLDCFTPRGMRPPPPFRAQKIARSNRRHSDHEGAMIHRDFDGGSLMVAACPLPSAKFVDLRSSISVDR--GSSLSSVGAAATGDWTSLVGRLAKVAPVCPRKGLARADDVCI---AAHHVVRGAASGTGAAHFSDSRTSGVKSTRRGEGGDKEARG-STAAMEASAMAETSSTVGNALRKHHECREWRT----VTDVSSLPALRCREVVRSITTVC-NQTRIRAVLGDVLSRAEEKFSVGAYLHWYYRHGLEEEDFLTAFEAVRTVEQSYDALAR 1713
+HLH+GQ GNQ+G ++W LA E DD+ +G SR + RA G S K+ RP +FH +ARC+ VDSEPKVVRSF Q + + P + + Q+G NNWAMG+ R T + DR M+ +++E ER C+ S+V+ HSL GGTGSG+G +L+++RD YP Y+++T V P SG+TPLQ+YN+ L+L LQ ADAVIY+ ND+LL A ++ GT + VS ++N + D+ FP + A R F+ G L+ CP+P+AK +++RS + DR + S + + T L V + L+R + A+ ++ T A+ +SRT+ ST RG + A EA E +G ++ W VT S PA V++ T+C N L RA+ +F GAY+HWY +HG+E+ DF TAF+ T+ Y+ R
Sbjct: 3 VHLHVGQCGNQLGAAYWRLAAASGEIHDDKRSQGNTGVSRHLR--RASGGSTSTLNGSKKAVSLPRP----LFHPSTGAARCILVDSEPKVVRSFMQETTDGATAFEPAHTHVEQTGRGNNWAMGYYGPRLKS-PAPTFTSLAVDDRRELVELVMDSLQREIERVDCYQGSVVM-HSLGGGTGSGLGCRVLESMRDTYPKAYILTTSVAPSCTSGDTPLQNYNAILTLKCLQDVADAVIYKDNDELLRTASYWKAVVH---------------ERVGT-------------------DNYQRVSLEEVNSMAAADLAGLLFPVATG---------------------------------DASTVRRFNFGKLLHDVCPMPAAKMLEVRSGVWRDRIGSGTRSKLPPKPSVAKTVSSSTLFHAPVVAQSRMLSRRHEHVADFDASLGILEKLVQQTTASFPRNSRTTIASSTV--------IRGFNPVAYEADRFTEK---LGKVVQTAFPPVPWLANMPQVTLSYSKPAPFSSLQVQASVTICVNNGHFLTSTKRFLERAQRQFQAGAYVHWYKQHGMEDADFETAFDKCTTLINEYETFLR 518
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: UPI00112E238B (tubulin delta chain-like n=1 Tax=Rhinatrema bivittatum TaxID=194408 RepID=UPI00112E238B) HSP 1 Score: 160 bits (404), Expect = 2.360e-40 Identity = 105/265 (39.62%), Postives = 138/265 (52.08%), Query Frame = 1
Query: 1 MSCIHLHLGQAGNQIGKSFWGLAEEEFLDDESGEGS-------RAFQPPRARV-GRPSRKQTTRF----LRPGGTA----MFHEDNSARCLAVDSEPKVVRSFQQHVSS--LRPENAIISQSGLANNWAMGFASCRSDGGEGRDGTKGGLFDRCMEGMRKEAERSCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPFRSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLL------LGAKTAATAARRNP 723
MS + L LGQ GNQ+G +W L E + + S + PR + G+ R + R L+ GG F D L VDSEPKV+R Q+ + R N I+ QSG NNWA G+ S+G + L R ME +RKE ER + V+ HSL+GGTGSG+GA L +A+RDEYP Y++S V P ++GE+PLQHYNS LSL LQ +AD ++ ND +L L TAA AA P
Sbjct: 12 MSAVWLQLGQCGNQLGLEWWQLLTNESAAHQESDRSPFSSSCLSLLRLPRHNILGKGRRGRNCRCSSIGLKSGGHPARYPFFARDGKLSALCVDSEPKVIRKLQKQIKKGVFRDSNLILGQSGRGNNWAYGYHDLHSEG-------ETSLLQRTMESLRKEVERRDCYSGTVLLHSLSGGTGSGLGARLCEAIRDEYPLGYILSVTVAPHQAGESPLQHYNSLLSLSWLQRYADGILLFHNDSVLKRTAALLRNTTAAVAADTQP 269
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: A0A7S0LEV1_9EUKA (Tubulin delta chain (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LEV1_9EUKA) HSP 1 Score: 149 bits (376), Expect = 4.170e-38 Identity = 95/223 (42.60%), Postives = 119/223 (53.36%), Query Frame = 1
Query: 1 MSCIHLHLGQAGNQIGKSFWGLAEEEFLDDESGEGSRAFQPPRARVGRPSRKQTTRFLRPGGTAMFHEDNSARCLAV--DSEPKVVRSFQQHVSSLRPEN--AIISQSGLANNWAMGFASCRSDGGEGRDGTKGGLFDRCMEGMRKEAERSCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPFRSGETPLQHYNSALSLHHLQAFADAVI 657
M+ ++LH+GQAGN+IG +FW LA +E T R+ MF D+ RC AV DSEPKVVR + R E A+I QSG NNWAMGF GG + D +E +R + ER W + + HSL GGTGSG+G+ LLQALRD +P YL S CVGPF GE PL YN+ LSL +LQ FADA++
Sbjct: 26 MATVYLHVGQAGNEIGGAFWTLAAQE-------------------------PATRRW-------MF--DDRGRCKAVFLDSEPKVVRGVANSIGVERIERHCALIDQSGRGNNWAMGFHGTSEVGGSR-------VADAALEALRWQWERCDWCSGATLCHSLGGGTGSGLGSLLLQALRDAHPRHYLTSVCVGPFALGELPLSAYNATLSLSYLQEFADALV 207
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: A0A329SNZ5_9STRA (Tubulin domain-containing protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329SNZ5_9STRA) HSP 1 Score: 155 bits (393), Expect = 1.490e-37 Identity = 173/600 (28.83%), Postives = 255/600 (42.50%), Query Frame = 1
Query: 10 IHLHLGQAGNQIGKSFWGLAEE--EFLDDESGEGSRAFQPP--RARVGRPSRKQTTRFLRPGGTAMFHEDN-SARCLAVDSEPKVVRSFQQHVS----SLRPENAIISQSGLANNWAMG------------FASCRSDGGEGRDGTKGGLFDRCMEGMRKEAER-SCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPFRS-GETPLQHYNSALSLHHLQAFADAVIYRGNDDLLLGAKTAATAARRNPSGIGEGIILGGGDKGGTGGSFRPASLLSSGSSASTASRTRAVSTTDMNESFSLDMGSYFFPTSRSVHLDCFTPRGMRPPPPFRAQKIARSNRRHSDHEGAMIHRDFDGGSLMVAACPLPSAKFVDLRSSISVDR-GSSLSSVGAAATGDWTSLVGRLAKVAPVCPRKGLA-----RADDVCIAAHHVVRGAASGTGAAHFSDSRTSGVKST--RRGEGGDKEARGSTAAMEASAMAETSSTVGNALRKHHECREWRTVTDVSSLPALRCREVVRSITTVC-NQTRIRAVLGDVLSRAEEKFSVGAYLHWYYRHGLEEEDFLTAFEAVRTVEQSYDALAR 1713
+HLH+GQ GNQ+G ++W LA E D G P RA G + + + +FH +ARC+ VDSEPKV+R+ V + P A + Q+G NNWAMG F S D + R+ L + M+ +R E E C+ S+V+ HSL GGTGSG+G +L+++RD YP Y+++ V P + G+TPLQ+YN+ L+L LQ ADAVIY+ ND+LL A G + ++ G + + VS ++N + D+ FP +G+ + R FD G L+ CP+P+AK +D+RS + DR GS SS + T ++ APV + L A D A+ ++ T A +S + ST R +EA T + A ST A + + SSL A ++ T+C N L RA+ +F GAY+HWY +HG+E+ DF TAF+ T+ Y+ L R
Sbjct: 3 VHLHVGQCGNQLGAAYWRLAASSGEIQDGNRNRGDTGASRPLRRASGGSTAAIKGAKEAVSLPRQLFHPSTGAARCILVDSEPKVIRAVCHEVIDGAVACLPAYAHVEQAGRGNNWAMGYYGPRLKSPTPAFTSLAVD--DHRE-----LVELVMDSLRHEIEGVDCYQGSVVM-HSLGGGTGSGLGCRVLESMRDTYPKAYIVTASVAPSCTRGDTPLQNYNAVLTLKCLQDVADAVIYKDNDELLRTA------------GYWKAMVQG-------------------------SDNNQRVSLEEVNSMAAADLAGLLFPVGTG--------------------------------DGSTV-RPFDFGKLLHDVCPMPAAKILDVRSGVWRDRIGSDTSSKPPSKTSLAKTVSSATLFHAPVVAQARLLSRRHEHAQDFD-ASLDMLEKLVQQTAACFPRNSNATIASSTVIRGYNPMSREAGRFTEKLGQIVQAAFPSTPWLATMPQATLA-YSKLAPYSSLQA-------QASATICVNNGHFLTTTRRFLERAQRQFHAGAYVHWYKQHGMEDADFETAFDKCATLINEYETLLR 515
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: A0A6P7XJX9_9AMPH (Tubulin delta chain n=4 Tax=Microcaecilia unicolor TaxID=1415580 RepID=A0A6P7XJX9_9AMPH) HSP 1 Score: 154 bits (388), Expect = 3.550e-37 Identity = 91/229 (39.74%), Postives = 122/229 (53.28%), Query Frame = 1
Query: 1 MSCIHLHLGQAGNQIGKSFWGLAEEEFLDDESGEGSRAFQPPRARVGRPSRKQTTRFLRPGGTAMFHEDNSARCLAVDSEPKVVRSFQQHVSS--LRPENAIISQSGLANNWAMGFASCRSDGGEGRDGTKGGLFDRCMEGMRKEAERSCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGPFRSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLL 681
MS + L +GQ GNQIG +W + E + +++ R+ F D LAVDSE KV+R Q+ + R N I+ Q G NNWA G+ RSDG + L +R ME RKE ER + V+ HSL+GGTGSG+GA L +A+RDEYP Y++S V P ++GE+PLQ+YNS LSL LQ +AD V+ NDD+L
Sbjct: 46 MSTVWLQVGQCGNQIGLEWWQILTSESC---------------------AHQESDRY------PFFTRDGKLSALAVDSELKVIRKLQKQIKRGVFRDSNIILGQRGRGNNWAYGYHGVRSDG-------EASLLERTMESFRKEVERRDCYSGTVLLHSLSGGTGSGLGARLCEAIRDEYPLGYILSVTVAPHQTGESPLQNYNSLLSLSWLQRYADGVLLFHNDDVL 240
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Match: A0A6A3FJM8_9STRA (Tubulin domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3FJM8_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.040e-36 Identity = 165/623 (26.48%), Postives = 256/623 (41.09%), Query Frame = 1
Query: 10 IHLHLGQAGNQIGKSFWGLAEEEF---LDDESGEGSRAFQPPRARVGRPSRK-QTTRFLRPGGTAMFHEDNS-ARCLAVDSEPKVVRSFQQH----VSSLRPENAIISQSGLANNWAMG------------FASCRSDGGEGRDGTKGGLFDRCMEGMRKEAER-SCWLNSIVVTHSLAGGTGSGIGAGLLQALRDEYPSLYLISTCVGP-FRSGETPLQHYNSALSLHHLQAFADAVIYRGNDDLLLGAKTAATAARRNPSGIGEGIILGGGDKGGTGGSFRPASLLSSGSSASTASRTRAVSTTDMNESFSLDMGSYFFPTSRSVHLDCFTPRGMRPPPPFRAQKIARSNRRHSDHEGAMIHRDFDGGSLMVAACPLPSAKFVDLRSSISVDRGSS-----LSSVGAAATGDWTSLVGRLAKVAPVCPRKGLA--------------------------RADDVCIAAHHVVRGAASGTGAA-HFSDSRTSGVKSTRRGEGGDKEARGSTAAMEASAMAETSSTVGNALRKHHECREWRTVTDVSSLPALRCREVVRSITTVCNQTRIRAVLGDVLSRAEEKFSVGAYLHWYYRHGLEEEDFLTAFEAVRTVEQSYDALAR 1713
+H+H+GQ GNQ+G ++W LA D+ S + + Q R +G P+ ++ P +FH + ARC+ VDSEPKVVR+ + +++ +P + + Q+G NNWAMG F S D + R+ L + ME +R+E E C+ S+V+ HSL GGTGSG+G +L+++RD Y Y+++ V P + G++PLQ+YN+ L+L LQ ADAVIY+ ND+LL A A+ T S + VS +MN + D+ FP + + ++R FD G L+ CP+P+ K +D+RS + DR S L S + A +++ + A V P GL R+ +A+ ++RG G+ HFS+ + AM ET+ L + T + + P+L+ + S T N L RA+ +F GAY+HWY +HG+E DF AFE T+ Y+ R
Sbjct: 3 VHVHVGQCGNQVGAAYWSLAAASCDVQPDNRSQCDTGSSQQLRRGLGGPTTAVNASKKALPLPRHLFHPSSRVARCIMVDSEPKVVRAVCEAGVDGLANFQPAHTHVEQAGRGNNWAMGYYGPRLKAPAPAFTSLAVD--DRRE-----LVELVMESLRREIEAVDCYQGSVVM-HSLGGGTGSGLGCRVLESMRDTYSKAYIVTASVAPSWTRGDSPLQNYNAVLTLRCLQEIADAVIYKDNDELLRTAAYWKAVAQEKVG---------------------------------TDSMNQRVSLVEMNSMAATDLAGMLFPLALG---------------------------------DSSLNRPFDFGKLLHDVCPMPATKMLDVRSGVWRDRAGSGVRNKLPSKASVAKDVFSATLFH-APVVPQARSLGLRHEHAADFNTSLDLLEKLVHQTVASFPRSYFTALASRTLIRGFYPGSSELDHFSE--------------------------KLGAMVETAFPPVPWLAATPQAT--LTFSKPAPFPSLQAKA---SATICVNNGSFLTSTKRFLERAQRQFHAGAYVHWYKQHGMENGDFEAAFEQCTTLINGYETTLR 519 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig133.2459.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig133.2459.1 >prot_F-serratus_M_contig133.2459.1 ID=prot_F-serratus_M_contig133.2459.1|Name=mRNA_F-serratus_M_contig133.2459.1|organism=Fucus serratus male|type=polypeptide|length=581bp MSCIHLHLGQAGNQIGKSFWGLAEEEFLDDESGEGSRAFQPPRARVGRPSback to top mRNA from alignment at F-serratus_M_contig133:464213..467825- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig133.2459.1 ID=mRNA_F-serratus_M_contig133.2459.1|Name=mRNA_F-serratus_M_contig133.2459.1|organism=Fucus serratus male|type=mRNA|length=3613bp|location=Sequence derived from alignment at F-serratus_M_contig133:464213..467825- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig133:464213..467825- >mRNA_F-serratus_M_contig133.2459.1 ID=mRNA_F-serratus_M_contig133.2459.1|Name=mRNA_F-serratus_M_contig133.2459.1|organism=Fucus serratus male|type=CDS|length=3486bp|location=Sequence derived from alignment at F-serratus_M_contig133:464213..467825- (Fucus serratus male)back to top |