prot_F-serratus_M_contig133.2449.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig133.2449.1
Unique Nameprot_F-serratus_M_contig133.2449.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length1080
Homology
BLAST of mRNA_F-serratus_M_contig133.2449.1 vs. uniprot
Match: D8LM26_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LM26_ECTSI)

HSP 1 Score: 728 bits (1879), Expect = 8.060e-243
Identity = 504/1158 (43.52%), Postives = 624/1158 (53.89%), Query Frame = 0
Query:    1 MTAIPYCDQHGWRWDRGSGPSPCMGETISFWLAVFGCLCS-GLTSSSYFTVQRRASLAGSFGAKVHGVQIALSLAQSIVALVGGVLSARPSGMLCGALLLHTLGWTMAWLASAFAISRNADLCKRLVWWWLGGAITNSVVLSSLHAASHREGHGLPAEIGLLSWVSFFGNTLLVLLQLAKPELDDTESIYVRVLDHGTVL----SAGTDWQEFWVGGGSTDAFDASGRLITRRQGRSGKCLRGFFRYCXXXXSYLGSERARPNSQALQDAGIAWPIAGVEGGLSTDSLNDSLLGSIGLESSSGSGSSAIKSNRGLSQVAPGSRGFGRISRSLSSMLGRSDKAARQDRD------------------GASEAGFQERNYFRSNLGGASPLASGMRTIPGSRQSR----DRSLVSPSYS--VPFASRPPPQPAAPVFGVSITRWRLVDADGVPAAQGSPS-DVASIDRTSMGLSVHGPSTSHTVSLRGYDAPPPPPRELPSASSMDIT----TESGLCYESGRDETPATALTLQLELSVRSSGQGEMDWWGRHGETYPGATSSRGFAAVGRGVDSGRTAA-----ASDWRVWRSCPADVVALYDALALRFGPEFCGRVPRPQLRTPVTIAMVPSAASKQEDGEGSQSATAESLTPVA------APHRADIQRDARMVGSFLRGLLGQRQFLSTAVMDFLAPPPRISLEMSESRLTEGKGDAENDDDDDGRSWDGSDGGSLG----------SEDARAPRRTKNDFGRSSLNPFHPGTEEP-SFTTHTGEAVAGAALASDYGVWLKRLAVRMRRATPAGDRFVRLRRIGPAVTGDEVVRWLVSSSGECRGDRASAVRLGQDMVSNRLLTPLCAGY---DEDLAGTRDASAASKQSKPRQRDLLRAFDDGVGWLFAYAGEALRDPSAAAAAPEVSVMKGSRLGVSVGEWIETSDNEGPHACFVVHTEVEVTQEAWDTPRRYRDFTQLRKRLLRLGIDLPKVMEVRGGSGGDGRRAGS--LAPDLPKKTWRSNKFDRDHLNARRASLETYLKAAVEAAMATPHLAGNLLMRFLDPDEASLRLLCD--------RNPFAS------WSPVAETPITRGAASSVRDVH----DLGGEREDDPSVARDKEEAQDFDSLTDSLGGFG 1079
            M +IPYCD HGW W+ G GPSPCMGET SF LA    L +  LT  +    QR A+ AGS  A+VH VQI L++ Q+ +ALV GVL  RP GML GA LL+++ WT A    A A+ R+ D  K L+W+W G  + NSVVLSSL  AS   GH LPAEIG LSW+SFF N +LV+LQL KPELDDTE +YVRV+    V+    SA   WQ FW GGG  D FD +   ++     +        +  XXXX                + G AWPIAG   G    +LN+SLLG IGL+      SS  K   G +                                                  GAS    Q+ + FR  L G    AS       S QS           PSYS       R PP+ AAP+FGV++TRWRLVD DG P A GS S DVA  DR+                               ++S ++       +  L  +          L +Q EL VR+SG+GEMDWWGR     P   SS G   +G     G   A     A DWRVWRS  AD +ALYDALALRFG EFCGRV RP+L+T +  +   ++    +D  GS    +   +P A      APHR D+ RDA+ VG+FLR LLG RQFLSTAVMD+LA P   SL  ++     G G AE           GSD GS G                              PF  G  +  S  +  G+AVAGAALASDYG WLKRLAVR+RRATPAG++FVRLR I PAVTG++VVRWL+     C GDRASAVRLGQDMVS+RLL P+CAGY   +E++ G    S++ K+      +LLR+FDD VGWLFA+ G+ALRDP A     +V+VM  + + V V  W ETSD++G H  FVVHT VE TQEAW++PRRYR+FTQLRKRLLRLGID+P                    LAP LP+KTWR+NKFD++HL  RRA+LE YL+AAV+ A++ PHL+G+L+MRFLDPDE++LR+L +        RNPFA        SP   TP  R              D+G E   + S+  ++ EA+DFD LTDSLGGFG
Sbjct:    1 MGSIPYCDHHGWNWESGQGPSPCMGETASFLLASSVLLYTIPLTKDTLHPFQRAAA-AGSTAARVHAVQITLAIVQASIALVCGVLFVRPRGMLSGANLLYSMSWTAASCTMAVALQRHPDCSKTLIWFWCGALVVNSVVLSSLRHASEVSGHHLPAEIGCLSWMSFFANAVLVVLQLFKPELDDTEGVYVRVVGREGVVPSASSANNGWQTFWAGGG--DTFDVAATAVSGDDRNT--------KXXXXXXXXXXXXXXXXXXXXXFEGGGAWPIAGGTNGRG-GTLNESLLGIIGLDDQDREFSSPSKPEAGWNNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGASWLQRQD-SPFRRKLWGDGGFASATTVTRASAQSALSAXXXXXXPPSYSGAASIGVRAPPRVAAPIFGVAVTRWRLVDLDGEPLAHGSSSGDVAWTDRSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRASSMVESRFNDHLDPSLALDPNDGARVGEPLGVQFELVVRASGRGEMDWWGRGDSAEP---SSPGAGHIGIHPPHGPAPATPGTGAGDWRVWRSA-ADTLALYDALALRFGQEFCGRVSRPKLKTTLPSSAAGASGVLSDDRSGSPPRPSSPDSPPALIVASAAPHRVDMLRDAKTVGAFLRSLLGLRQFLSTAVMDYLAQPAPASLP-ADDLSANGGGGAEA----------GSDHGSDGYFXXXXXXXXXXXXXXXXXXXXXXXXXXXRPFSSGKADGGSGPSAAGQAVAGAALASDYGTWLKRLAVRLRRATPAGEQFVRLRCISPAVTGEQVVRWLMREK-VCNGDRASAVRLGQDMVSHRLLAPVCAGYHRPEEEVTGGGGDSSSGKEPG----ELLRSFDDAVGWLFAFVGDALRDPFAPPPPTQVAVMSNTGVDVRVTSWTETSDDDGAHVSFVVHTRVEATQEAWESPRRYREFTQLRKRLLRLGIDIPAAXXXXXXXXXXXXXXXXXXLAPGLPRKTWRANKFDKEHLEKRRAALEAYLRAAVKEALSAPHLSGHLMMRFLDPDESNLRVLSEQRRQQQRSRNPFARAHNSPPCSPRGGTPGGRRGVXXXXXXXXXTADVGNESVGE-SLTEERTEAEDFDFLTDSLGGFG 1124          
BLAST of mRNA_F-serratus_M_contig133.2449.1 vs. uniprot
Match: A0A7S3XZP5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZP5_HETAK)

HSP 1 Score: 58.5 bits (140), Expect = 1.120e-5
Identity = 41/138 (29.71%), Postives = 63/138 (45.65%), Query Frame = 0
Query:  881 VSVGEWIETSDNEGPHACFVVHTEVEVTQEAWDTPRRYRDFTQLRKRLLRLGIDLPKVMEVRGGSGGD------GRRAGSLAPDLP-KKTW--RSNKFDRDHLNARRASLETYLKAAVEAAMATPHLAGNLLMRFLDP 1009
            V+V  ++   D +    C  V  E     +AW+   RY DF  L   L +      K+  ++    G+      G       P+LP ++ W  +  KFDR HL  RRA LE YL+A +  A+  P+    +++ FLDP
Sbjct:   36 VAVPSFVVLEDTQVVEYCVAVTAE----DDAWEVRHRYSDFKDLANLLAKAAAK--KMPTIQNSGDGETSVEDKGEDGDIKLPELPGRRGWARKGRKFDRAHLQRRRAGLEGYLRALLRIAIEHPYYLSQIMLDFLDP 167          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig133.2449.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LM26_ECTSI8.060e-24343.52PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
A0A7S3XZP5_HETAK1.120e-529.71Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036871PX domain superfamilyGENE3D3.30.1520.10coord: 874..1015
e-value: 7.7E-14
score: 53.6
IPR036871PX domain superfamilySUPERFAMILY64268PX domaincoord: 878..1011
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 743..831
e-value: 1.4E-5
score: 26.9
IPR001683Phox homologous domainPFAMPF00787PXcoord: 892..1009
e-value: 1.6E-11
score: 44.1
IPR001683Phox homologous domainPROSITEPS50195PXcoord: 877..1014
score: 12.947
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..157
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 86..96
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..50
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 127..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 179..1079
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 116..126
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..85
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 158..178
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 51..61
NoneNo IPR availableTMHMMTMhelixcoord: 27..49
NoneNo IPR availableTMHMMTMhelixcoord: 125..147
NoneNo IPR availableTMHMMTMhelixcoord: 64..86
NoneNo IPR availableTMHMMTMhelixcoord: 159..178
NoneNo IPR availableTMHMMTMhelixcoord: 93..115
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 758..816

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig133contigF-serratus_M_contig133:301209..321472 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig133.2449.1mRNA_F-serratus_M_contig133.2449.1Fucus serratus malemRNAF-serratus_M_contig133 301179..322168 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig133.2449.1 ID=prot_F-serratus_M_contig133.2449.1|Name=mRNA_F-serratus_M_contig133.2449.1|organism=Fucus serratus male|type=polypeptide|length=1080bp
MTAIPYCDQHGWRWDRGSGPSPCMGETISFWLAVFGCLCSGLTSSSYFTV
QRRASLAGSFGAKVHGVQIALSLAQSIVALVGGVLSARPSGMLCGALLLH
TLGWTMAWLASAFAISRNADLCKRLVWWWLGGAITNSVVLSSLHAASHRE
GHGLPAEIGLLSWVSFFGNTLLVLLQLAKPELDDTESIYVRVLDHGTVLS
AGTDWQEFWVGGGSTDAFDASGRLITRRQGRSGKCLRGFFRYCCCCCSYL
GSERARPNSQALQDAGIAWPIAGVEGGLSTDSLNDSLLGSIGLESSSGSG
SSAIKSNRGLSQVAPGSRGFGRISRSLSSMLGRSDKAARQDRDGASEAGF
QERNYFRSNLGGASPLASGMRTIPGSRQSRDRSLVSPSYSVPFASRPPPQ
PAAPVFGVSITRWRLVDADGVPAAQGSPSDVASIDRTSMGLSVHGPSTSH
TVSLRGYDAPPPPPRELPSASSMDITTESGLCYESGRDETPATALTLQLE
LSVRSSGQGEMDWWGRHGETYPGATSSRGFAAVGRGVDSGRTAAASDWRV
WRSCPADVVALYDALALRFGPEFCGRVPRPQLRTPVTIAMVPSAASKQED
GEGSQSATAESLTPVAAPHRADIQRDARMVGSFLRGLLGQRQFLSTAVMD
FLAPPPRISLEMSESRLTEGKGDAENDDDDDGRSWDGSDGGSLGSEDARA
PRRTKNDFGRSSLNPFHPGTEEPSFTTHTGEAVAGAALASDYGVWLKRLA
VRMRRATPAGDRFVRLRRIGPAVTGDEVVRWLVSSSGECRGDRASAVRLG
QDMVSNRLLTPLCAGYDEDLAGTRDASAASKQSKPRQRDLLRAFDDGVGW
LFAYAGEALRDPSAAAAAPEVSVMKGSRLGVSVGEWIETSDNEGPHACFV
VHTEVEVTQEAWDTPRRYRDFTQLRKRLLRLGIDLPKVMEVRGGSGGDGR
RAGSLAPDLPKKTWRSNKFDRDHLNARRASLETYLKAAVEAAMATPHLAG
NLLMRFLDPDEASLRLLCDRNPFASWSPVAETPITRGAASSVRDVHDLGG
EREDDPSVARDKEEAQDFDSLTDSLGGFG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036871PX_dom_sf
IPR036388WH-like_DNA-bd_sf
IPR001683Phox
IPR036390WH_DNA-bd_sf