prot_F-serratus_M_contig133.2442.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig133.2442.1
Unique Nameprot_F-serratus_M_contig133.2442.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length247
Homology
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: D8LLX7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLX7_ECTSI)

HSP 1 Score: 292 bits (748), Expect = 5.530e-97
Identity = 155/244 (63.52%), Postives = 178/244 (72.95%), Query Frame = 0
Query:    6 LNAAARRQLGEVAGPATRSGARGTF-----FACRRWRSDDTREASPLPAPVPLVVRRELDDKRGGERAWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANVTSGSALSSKRKRGEDGYVEDPVDWEEDFGEVAEAKAAERGVED 244
            + AA RRQ  +  G + R     T       ACRRW SD +   S  P P P       D      R WTWSTPSP RPGR  ++I V+PRVNLT +EVV+A+E QG TDVR IDLRGKG GMGD+M+F TA  P QMRR+ANMVVQALK+R L +A+GITGAEGIDCDDWMLVDCDNLIVHFMTAEAR+ELDLETHW  V SG+AL SKRK+GE+G+VEDPVDWEEDFG+ A AKAA RG+ D
Sbjct:    8 VRAATRRQCVQQQGTSCRRRLPSTVGAVPGLACRRWLSDSS---SDTPRP-PSSAAAATDG-----RTWTWSTPSPNRPGRGGAEIAVIPRVNLTVDEVVKAVEAQGGTDVRAIDLRGKGAGMGDFMVFCTAATPLQMRRLANMVVQALKQRKLVNAMGITGAEGIDCDDWMLVDCDNLIVHFMTAEARQELDLETHWETVASGTALGSKRKKGEEGHVEDPVDWEEDFGQEA-AKAAGRGIID 241          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: A0A836CM28_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM28_9STRA)

HSP 1 Score: 138 bits (347), Expect = 7.820e-36
Identity = 71/135 (52.59%), Postives = 95/135 (70.37%), Query Frame = 0
Query:   67 RAWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANV 201
            R+WTWS+ +P + G +A DI V P+V LT  EVV A+E  G TD+RV+ L GK + + D MIF T  +   M+R+++++  ALKRR L+ A GITGAEG DCDDWM+VDC NLIVH   A+ R+EL+LE  W N+
Sbjct:   78 RSWTWSSNAPRKAGGSA-DIDVKPKVPLTVGEVVTALENNGGTDIRVVHLAGK-SDLADAMIFCTGRSMRHMQRLSDVITYALKRRKLSHAPGITGAEGYDCDDWMIVDCWNLIVHVFEAKYRKELNLEARWENI 210          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: A0A0P1A703_PLAHL (Iojap-like ribosome-associated protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A703_PLAHL)

HSP 1 Score: 119 bits (297), Expect = 2.240e-28
Identity = 62/154 (40.26%), Postives = 92/154 (59.74%), Query Frame = 0
Query:   48 PAPVPLVVRRELDDKRGGERAWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANV 201
            P   P     E+D K   +  W     +P+   R A  IP +P+  L+ +EV +A+E + A DV  +DL GK +G+ +YM+F T  +   MRRMA++++++LK R + D     G EG DCDDWM+ DC+N++VHFM A+ R  L LE HW N+
Sbjct:  116 PRNFPEGHELEIDQKEAVDMDWE----APVAGNRHADIIPPIPQTYLSLDEVQKALEREKAIDVYTVDLSGK-SGLANYMVFVTGRSQAHMRRMADLLIKSLKAREIVDDFDY-GVEGRDCDDWMIADCNNIVVHFMRADTRRILALEDHWENM 263          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: A0A7S2R5J7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R5J7_9STRA)

HSP 1 Score: 116 bits (290), Expect = 1.130e-27
Identity = 63/133 (47.37%), Postives = 79/133 (59.40%), Query Frame = 0
Query:   68 AWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWAN 200
            +W W  P+ +    A   IPVVPR  LT EEV  A+E      V V+D+ GK       M+F T      MRRMA+++V ALK+R +  A G +GAEG DCDDWM+VD  N+IVH M  +AR  LDLE HW N
Sbjct:   70 SWNWEPPAVVEQQAAGYQIPVVPRKYLTVEEVTTALEELRGMQVAVVDVTGKLEETSS-MVFCTGLGRTHMRRMADVLVSALKKRKIK-APGASGAEGYDCDDWMIVDAGNIIVHLMNEKARRLLDLEAHWKN 200          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: A0A3F2RH48_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RH48_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.600e-27
Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 0
Query:   58 ELDDKRGGERAWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANVTS 203
            E D +   E A      +P    R A  IP VP+  LT +EV +A+E + A DV  +DL GK + + DYM+F+T  +   MRRMA+++++++K R + D     G EG DCDDWM+ DC+N++VH M A+ R  L LE HW N+ +
Sbjct:   41 EGDTETKAEEAEELEWQAPHAGDRHADIIPAVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 184          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: K3X3T5_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X3T5_GLOUD)

HSP 1 Score: 112 bits (281), Expect = 1.550e-26
Identity = 55/121 (45.45%), Postives = 80/121 (66.12%), Query Frame = 0
Query:   81 RAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANV 201
            R A  IPV+P+   T +EV+ A+E + A +V  +DL GK + + DYMIF+T  +   MRRMA+M++ +L+ RN+ D       EG DCDDWM+ DC+N++VHFM  + R  L+LE HW N+
Sbjct:   91 RHADMIPVIPQTYFTLDEVLAALEKEKAINVYTVDLAGKSS-LADYMIFTTGRSQAHMRRMADMMINSLRARNIEDDFNYV-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEDHWENM 209          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: A0A3R7GIQ2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7GIQ2_9STRA)

HSP 1 Score: 114 bits (286), Expect = 1.660e-26
Identity = 60/146 (41.10%), Postives = 88/146 (60.27%), Query Frame = 0
Query:   58 ELDDKRGGERAWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANVTS 203
            E D +   E A      +P    R A  IP VP+  LT +EV +A+E + A DV  +DL GK + + DYM+F+T  +   MRRMA+++++++K R + D     G EG DCDDWM+ DC+N++VH M A+ R  L LE HW N+ +
Sbjct:  157 EGDTETKAEEAEELEWQAPHAGDRHADIIPAVPQTYLTIDEVQEALEREKAIDVYTVDLAGKSS-LADYMVFATGKSQAHMRRMADLLIKSMKAREIVDEFDY-GVEGRDCDDWMIADCNNIVVHLMHADTRRILALEDHWENMVN 300          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: W7TLC1_9STRA (Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TLC1_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.500e-26
Identity = 71/164 (43.29%), Postives = 90/164 (54.88%), Query Frame = 0
Query:   69 WTWSTPSPLRPGRA-------ASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTD--AVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANVTSGSALSSKRKRGEDGYVEDPV 223
            WTW+ PS L    A       A  IPV+PR  L P EVV+A+   G  DV  +D+RGKG    + MIF++  +   +RRMA+ VV ALK R + +  A G+TGAEG DC+DWM+VD  N+IVH M    R  L LE  W     G      RK G  G +  PV
Sbjct:  230 WTWARPSRLAQEEAQGRKTSRAGAIPVLPRTLLRPAEVVEALVALGGEDVASVDIRGKGNFNAEAMIFASGRSGGHLRRMADTVVGALKARGIEEMEAPGVTGAEGYDCEDWMIVDGGNVIVHLMEPSQRAALGLEGFWGEGEEG------RKGGRVGDLVMPV 387          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: A0A2D4BP62_PYTIN (Iojap-like ribosome-associated protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BP62_PYTIN)

HSP 1 Score: 112 bits (281), Expect = 2.980e-26
Identity = 56/131 (42.75%), Postives = 85/131 (64.89%), Query Frame = 0
Query:   71 WSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANV 201
            W  P   +  R A  IP +P+  LT +EV+ A+E + A DV  +DL GK + + D+M+F+T  +   MRRMA+M++Q++K RN+ D    +  EG DCDDWM+ DC+N++VHFM  + R  L+LE HW ++
Sbjct:  104 WEVPDAGK--RNADIIPPIPQTYLTLDEVLAALEREKAIDVYTVDLAGKSS-LADFMVFTTGRSQAHMRRMADMLIQSMKARNIEDEFDYS-VEGRDCDDWMIADCNNIVVHFMREDTRRILNLEHHWEHM 230          
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Match: A0A6G0WP87_9STRA (AP2/ERF domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WP87_9STRA)

HSP 1 Score: 112 bits (281), Expect = 7.120e-26
Identity = 63/162 (38.89%), Postives = 90/162 (55.56%), Query Frame = 0
Query:   49 APVPLVVRRELDDKRGG-------ERAWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVVQAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALKRRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWANVTS 203
            AP+        DD   G       + +  W+ P      R A  IP +P   LT EE++ A+E + A D+  IDL GK + +  YM+F T  +   MRRMA+MV+ ++K RN+ D  G    EG D DDWM+ D +N++VHF+TAE R+ L LE HW N+ +
Sbjct:  137 APINFPDGEPNDDDESGNLEVGGIDGSHEWTLPD--AGSRHADIIPPIPNTYLTMEELIPALEREQAIDIYTIDLEGKSS-LASYMVFCTGRSRNHMRRMADMVILSMKARNMQDDFGYV-VEGRDSDDWMIADVNNIVVHFLTAETRQMLQLEDHWENMVN 294          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig133.2442.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLX7_ECTSI5.530e-9763.52Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836CM28_9STRA7.820e-3652.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A0P1A703_PLAHL2.240e-2840.26Iojap-like ribosome-associated protein n=1 Tax=Pla... [more]
A0A7S2R5J7_9STRA1.130e-2747.37Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A3F2RH48_9STRA1.600e-2741.10Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
K3X3T5_GLOUD1.550e-2645.45Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A3R7GIQ2_9STRA1.660e-2641.10Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
W7TLC1_9STRA2.500e-2643.29Iojap-like protein n=2 Tax=Monodopsidaceae TaxID=4... [more]
A0A2D4BP62_PYTIN2.980e-2642.75Iojap-like ribosome-associated protein n=1 Tax=Pyt... [more]
A0A6G0WP87_9STRA7.120e-2638.89AP2/ERF domain-containing protein n=1 Tax=Aphanomy... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.460.10coord: 93..211
e-value: 1.8E-23
score: 84.4
NoneNo IPR availablePFAMPF02410RsfScoord: 97..198
e-value: 1.3E-22
score: 80.0
NoneNo IPR availablePANTHERPTHR21043:SF0MITOCHONDRIAL ASSEMBLY OF RIBOSOMAL LARGE SUBUNIT PROTEIN 1coord: 83..201
NoneNo IPR availableSUPERFAMILY81301Nucleotidyltransferasecoord: 97..201
IPR004394Protein Iojap/ribosomal silencing factor RsfSTIGRFAMTIGR00090TIGR00090coord: 97..198
e-value: 1.4E-17
score: 61.6
IPR004394Protein Iojap/ribosomal silencing factor RsfSPANTHERPTHR21043IOJAP SUPERFAMILY ORTHOLOGcoord: 83..201

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig133contigF-serratus_M_contig133:48542..75532 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig133.2442.1mRNA_F-serratus_M_contig133.2442.1Fucus serratus malemRNAF-serratus_M_contig133 47352..75633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig133.2442.1 ID=prot_F-serratus_M_contig133.2442.1|Name=mRNA_F-serratus_M_contig133.2442.1|organism=Fucus serratus male|type=polypeptide|length=247bp
MAWRCLNAAARRQLGEVAGPATRSGARGTFFACRRWRSDDTREASPLPAP
VPLVVRRELDDKRGGERAWTWSTPSPLRPGRAASDIPVVPRVNLTPEEVV
QAIEIQGATDVRVIDLRGKGTGMGDYMIFSTATNPFQMRRMANMVVQALK
RRNLTDAVGITGAEGIDCDDWMLVDCDNLIVHFMTAEAREELDLETHWAN
VTSGSALSSKRKRGEDGYVEDPVDWEEDFGEVAEAKAAERGVEDRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004394Iojap/RsfS/C7orf30