mRNA_F-serratus_M_contig1328.2437.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1328.2437.1
Unique NamemRNA_F-serratus_M_contig1328.2437.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 4.900e-52
Identity = 145/420 (34.52%), Postives = 197/420 (46.90%), Query Frame = 1
Query:   10 DSGVTFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASHDVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVI----NVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            D+G T HM     G   Y++      + VA G T P+ G+G + V L     TT ++ +  VA+VP L  NLVS     +   +     ++   L   G E + F  C    L+   G R      T  E          I  G A   +   D+ + H    H  E + R TA   G    G+   C  C  AK     +P KT  RA  K QR FVD+ G  +  SLGG  Y +I  DD TR+  V F+K KSDA  A    +A+       S +  VR+DNGGEF EGEF R   +  I  E TP  +P+YNGVAERALGL+++ A+    +   +     N P   LWA+A+ ++C+  N + TTS  E KSPYE+W G  P      PF      +   R HK  PK +KC ++G
Sbjct:  372 DTGATTHMFANSDGFVRYEECD--RRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLL-LKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCG--NLYVQNGFR------THTE-----HACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYP--SLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLG 772          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 4.950e-52
Identity = 145/420 (34.52%), Postives = 197/420 (46.90%), Query Frame = 1
Query:   10 DSGVTFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASHDVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVI----NVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            D+G T HM     G   Y++      + VA G T P+ G+G + V L     TT ++ +  VA+VP L  NLVS     +   +     ++   L   G E + F  C    L+   G R      T  E          I  G A   +   D+ + H    H  E + R TA   G    G+   C  C  AK     +P KT  RA  K QR FVD+ G  +  SLGG  Y +I  DD TR+  V F+K KSDA  A    +A+       S +  VR+DNGGEF EGEF R   +  I  E TP  +P+YNGVAERALGL+++ A+    +   +     N P   LWA+A+ ++C+  N + TTS  E KSPYE+W G  P      PF      +   R HK  PK +KC ++G
Sbjct:  385 DTGATTHMFANSDGFVRYEECD--RRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLL-LKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCG--NLYVQNGFR------THTE-----HACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYP--SLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLG 785          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 198 bits (503), Expect = 5.010e-52
Identity = 145/420 (34.52%), Postives = 197/420 (46.90%), Query Frame = 1
Query:   10 DSGVTFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASHDVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVI----NVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            D+G T HM     G   Y++      + VA G T P+ G+G + V L     TT ++ +  VA+VP L  NLVS     +   +     ++   L   G E + F  C    L+   G R      T  E          I  G A   +   D+ + H    H  E + R TA   G    G+   C  C  AK     +P KT  RA  K QR FVD+ G  +  SLGG  Y +I  DD TR+  V F+K KSDA  A    +A+       S +  VR+DNGGEF EGEF R   +  I  E TP  +P+YNGVAERALGL+++ A+    +   +     N P   LWA+A+ ++C+  N + TTS  E KSPYE+W G  P      PF      +   R HK  PK +KC ++G
Sbjct:  528 DTGATTHMFANSDGFVRYEECD--RRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLL-LKRVAHVPRLDYNLVSLTSLFDDGFETKTLNKHELELERGGGEVVYFPRCG--NLYVQNGFR------THTE-----HACAAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKPIPNKTSTRAVKKLQRVFVDLSGKARVQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGAPNYP--SLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLG 928          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 3.110e-50
Identity = 140/420 (33.33%), Postives = 197/420 (46.90%), Query Frame = 1
Query:   10 DSGVTFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASHDVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAIILMEELDDVI----NVPREKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            D+G T HM     G   Y++      + VA G T P+ G+G + V L   G TT ++ +  VA+VP L  NLVS     +   +     ++   L   G ES+     PR G        R   +  +            I  G A  ++A  ++ + H    H  E + R TA   G    G+   C  C  AK     +P KT  RA+ + QR F+D+ G  +  SL G  Y +I  D  TR+  V F+K KSDA  A    +A+       S +  VR+DNGGEF EGEF R   +  I  E TP  +P+YNGVAERALGL+++ A+    +   +     N P    WA+A+ +AC+  N + TTS  E KSPYE+W G  P      PF      +   R HK  PK +KC ++G
Sbjct:  398 DTGATTHMFANSDGFVRYEECD--RRVRVAAGETFPIVGYGDVTVTLSSRGGTTDLL-LKRVAHVPRLDYNLVSLTSLFDDGFQTKTLNKHELELERGGGESVY---SPRCGNLYVHNGCRTHTEHAY----------TAIAPGDAKASSAPVEINDFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYP--SFWAEAIAWACNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPAVYKVK-RTHKSEPKAQKCFYLG 798          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 184 bits (466), Expect = 3.630e-47
Identity = 141/427 (33.02%), Postives = 204/427 (47.78%), Query Frame = 1
Query:    1 WESDSGVTFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASH----DVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            W +D+G  FHM+ + A M + K      S+    G +  +   G +E+ +     +   V + +V Y P L  NL S          P   +   +  GL G +  V      +  F       IA           G+ SV     A   +   H    DV E H + AH  + + R TA  +G E  G+   C  C  AKA +  + ++T+ R+  K  R FVD+GG    +S+GG +Y +I  DD TR   + F+K KSDA  A  S +A        S +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL+ E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  + KSPYE+W+G+ P      PF    Y R   R  K+ PKGE C ++G
Sbjct:  232 WYADTGTAFHMTDSLACMKDLKPCHK--SVNGIGGVSCEISFSGTLEL-VFVTADSEFSVELKNVLYSPNLGYNLFS----------PSAEFDGESWNGLGGPDG-VMTAFKGQVTFQNFDGMLIASAYRL------GEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPSKLLPKGESCFYVG 636          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 183 bits (464), Expect = 6.520e-47
Identity = 141/427 (33.02%), Postives = 202/427 (47.31%), Query Frame = 1
Query:    1 WESDSGVTFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASH----DVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            W +D+G  FHM+ + A M + K      S+    G +  +   G +E+          M  + +V Y P L  NL S          P   +   +  GL G +  V      +  F       IA           G+ SV     A   +   H    DV E H + AH  + + R TA  +G E  G+   C  C  AKA +  + ++T+ R+  K  R FVD+GG    +S+GG +Y +I  DD TR   + F+K KSDA  A  S +A        S +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL+ E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  + KSPYE+W+G+ P      PF    Y R   R  K+ PKGE C ++G
Sbjct:  525 WYADTGTAFHMTDSLACMKDLKPCHK--SVNGIGGVSCEISFSGTLELVFVTADSEFSM-ELKNVLYSPNLGYNLFS----------PSAEFDGESWNGLGGPDG-VMTAFKGQVTFQNFDGMLIASAYRL------GEASVGTVLAALTPSNPKHKTTMDVNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLASVRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPSKLLPKGESCFYVG 929          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5K2M6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2M6_9PHAE)

HSP 1 Score: 182 bits (461), Expect = 9.980e-47
Identity = 142/426 (33.33%), Postives = 213/426 (50.00%), Query Frame = 1
Query:    1 WESDSGVTFHMSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETF-LEANLSGKGSVKITSGAALRAAASHDVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAV--GYARQSVREHKMAPKGEKCVFMG 1251
            W +D+G  FHM+   + M + K      +++   G T  ++  G +E+ +     +   V +++V Y P L  NL S   + E  G+   Y      LG P      F      G  +      +     + LE N  G     +T     +  +  DV E H + AH  E + R TA  +GIE TG+  AC  C  +KA +  +  +T+ R+  K  R FVD+GG    +S+GG +Y +I  DD TR   + F+K KSDA +A  S +A        S +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL+   A+   I  + L   + +P+ ++LWA+AM +AC+  N +  ++  + KSPYE+W G+   A+H RP+  +   Y R   R  K+ PKGE C ++G
Sbjct:  431 WYADTGTAFHMTDRLSCMKDLKPCHK--NVKGIGGVTCEIEFSGTLEL-VFVTADSQFPVELENVLYSPNLGYNLFSP--SAEFDGESWNY------LGGPDGVMTAFN-----GHVTFQNLDGMLISPAYRLENNCVGSVLAALTPSNP-KHESKMDVNEFHNIYAHSHEGLLRTTAKRLGIELTGKMHACTGCSMSKAFKKGIAHETKCRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRTWMYFLKSKSDAASAFRSFLASVRADGIPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEAAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEAINHTACSANPDSKSPYEMWHGE---ASHARPYPFLKPAYCRWQ-RPSKLLPKGEACFYVG 835          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 172 bits (436), Expect = 2.030e-46
Identity = 101/267 (37.83%), Postives = 150/267 (56.18%), Query Frame = 1
Query:  469 DVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            D+ E H + AH  E + R TA  +G +  G   AC  C  +KA R  + ++T++R+  K  R F D+GG    +S+GG +Y +I  DD TR   + F++ KSDA +A  + +A        S +E VR+DNGG+F  G+F    +   I  E TP  +PQYNGVAER LGL+ E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  +  SPYE+W+G+ P      PF    Y R   R  K+ PKGE C ++G
Sbjct:   33 DINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLASVRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFSKPAYCRWQ-RPSKLLPKGESCFYVG 297          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 174 bits (440), Expect = 4.190e-45
Identity = 141/435 (32.41%), Postives = 203/435 (46.67%), Query Frame = 1
Query:    1 WESDSGVTFHMSHTRAGMSNYKKASPGT------SIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASH----DVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADY---ITPQKLSIECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            W +D+G  FHM+ + + M + K            S EVA   TL +     + V  D    +   V + +V Y   L  N+ S          P   +   +  G PG    V      +  F       IA           G+ SV     A   A   H    D+ E H + AH  E + R TA  +G +  G   AC  C  +KA R  + ++T++R+  K  R FVD+GG    +S+GG +Y +I  DD TR   + F+K +SDA  A  + +A     I P    +E VR+DNGGEF  GEF    +   I  E TP  +PQYNGVAER LGL+ E A+   I  + L   + +P+ +KLWA+AM +AC+  N +  ++  +  SPYE+W+G+ P      PF    Y R   R  K+ PKGE C ++G
Sbjct:  113 WYADTGTAFHMTDSLSCMKDLKPCHKSVNGIGSVSCEVAFSGTLEL-----VFVTAD----SEFSVELKNVLYSQNLGYNIFS----------PSAEFDGESWNG-PGGPDGVMTAFNGQVTFQNFDGMLIASAYRL------GEASVGTVLAALTPANPKHETTMDINEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPS--FVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGE-PRPARPYPFLKPAYCRWQ-RPTKLLPKGESCFYVG 517          
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 172 bits (437), Expect = 2.390e-43
Identity = 140/435 (32.18%), Postives = 205/435 (47.13%), Query Frame = 1
Query:    1 WESDSGVTFHMSHTRAGMS------NYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMVRMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKVCPR------RGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASHDVMEVHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQRASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDATAALLSLVADYITPQKLS-IECVRTDNGGEF-EGEF*RELDRRSITHEHTPPDTPQYNGVAERALGLLREKAI---ILMEELDDVINVPR-EKLWAQAMLFACDVTNKSVTTSTNEGKSPYELWFGKSPTANHLRPFGAVGYARQSVREHKMAPKGEKCVFMG 1251
            W +D+G  F+M+ + + M       N  K   G + EVA   TL V  F   + +            + +V Y P L  NL S          P   +   +  GL G + ++             G+  AT  R        L  N  G     +T     R     DV + H +  H  E + R TA  +GIE TG+  AC  C   KA R A+   T   +  K  R FV++GG    +S+GG +Y +I  DD TR   + F++ KSDA +A  S +A+       S IE VR+DNGGEF  GEF    +   I  E TP  +P++NGVAER LGL+ E A+   I  + L   + +P+ ++LWA+AM +AC+  N +  ++  + KSPYE+W+G++  A    PF    Y +   R  K+ PKGE C ++G
Sbjct:  252 WYADTGTAFNMTDSLSCMKDVNPCHNKVKGIGGVTCEVALSGTLEV-AFVSADSEFS--------AELKNVLYAPKLGYNLFS----------PSAEFDGESWNGLGGPDGVMTAFHGHVTFQNFDGMLVATAYR--------LGHNSIGSVLAALTPSNPKRVKIM-DVNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLANVRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPY-PFLKPAYCKWQ-RPSKLLPKGESCFYVG 656          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1328.2437.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JZQ8_9PHAE4.900e-5234.52Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE4.950e-5234.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE5.010e-5234.52Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5JXF7_9PHAE3.110e-5033.33Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KZH7_9PHAE3.630e-4733.02Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBA7_9PHAE6.520e-4733.02Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K2M6_9PHAE9.980e-4733.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KVR5_9PHAE2.030e-4637.83Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV76_9PHAE4.190e-4532.41Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5JH25_9PHAE2.390e-4332.18Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1328contigF-serratus_M_contig1328:139035..140285 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score95.9
Seed ortholog evalue3.2e-17
Seed eggNOG ortholog159749.K0QZP2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PIF1-like helicase
EggNOG OGs2XG4E@2836,COG0507@1,COG2801@1,KOG0017@2759,KOG0987@2759
COG Functional cat.L
Best tax levelBacillariophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size1251
Cds size855
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1328.2437.1prot_F-serratus_M_contig1328.2437.1Fucus serratus malepolypeptideF-serratus_M_contig1328 139401..140255 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929297.870889-UTR-F-serratus_M_contig1328:139034..1394001622929297.870889-UTR-F-serratus_M_contig1328:139034..139400Fucus serratus maleUTRF-serratus_M_contig1328 139035..139400 -
1690962788.5721602-UTR-F-serratus_M_contig1328:139034..1394001690962788.5721602-UTR-F-serratus_M_contig1328:139034..139400Fucus serratus maleUTRF-serratus_M_contig1328 139035..139400 -
1622929297.9200284-UTR-F-serratus_M_contig1328:140255..1402851622929297.9200284-UTR-F-serratus_M_contig1328:140255..140285Fucus serratus maleUTRF-serratus_M_contig1328 140256..140285 -
1690962788.596294-UTR-F-serratus_M_contig1328:140255..1402851690962788.596294-UTR-F-serratus_M_contig1328:140255..140285Fucus serratus maleUTRF-serratus_M_contig1328 140256..140285 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929297.9021916-CDS-F-serratus_M_contig1328:139400..1402551622929297.9021916-CDS-F-serratus_M_contig1328:139400..140255Fucus serratus maleCDSF-serratus_M_contig1328 139401..140255 -
1690962788.5840282-CDS-F-serratus_M_contig1328:139400..1402551690962788.5840282-CDS-F-serratus_M_contig1328:139400..140255Fucus serratus maleCDSF-serratus_M_contig1328 139401..140255 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1328.2437.1

>prot_F-serratus_M_contig1328.2437.1 ID=prot_F-serratus_M_contig1328.2437.1|Name=mRNA_F-serratus_M_contig1328.2437.1|organism=Fucus serratus male|type=polypeptide|length=285bp
MSHTRAGMSNYKKASPGTSIEVADGNTLPVDGFGRIEVDLDQPGRTTKMV
RMDDVAYVPGLSRNLVSTVKAVEQWGKPLVYYRNRAVLGLPGEESLVFKV
CPRRGLFSATGARRIARQETFLEANLSGKGSVKITSGAALRAAASHDVME
VHRMLAHPSEAITRKTAATIGIETTGQWGACETCFQAKAKRHAVPKKTEQ
RASVKGQRFFVDVGGPMKHSSLGGNNYVVIFVDDCTRFKVVKFVKKKSDA
TAALLSLVADYITPQKLSIECVRTDNGGEFEGEF*
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mRNA from alignment at F-serratus_M_contig1328:139035..140285-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1328.2437.1 ID=mRNA_F-serratus_M_contig1328.2437.1|Name=mRNA_F-serratus_M_contig1328.2437.1|organism=Fucus serratus male|type=mRNA|length=1251bp|location=Sequence derived from alignment at F-serratus_M_contig1328:139035..140285- (Fucus serratus male)
TGGGAGTCAGATTCCGGCGTCACGTTTCACATGTCTCACACGCGCGCCGG AATGTCTAACTATAAGAAGGCTTCACCAGGGACGAGCATTGAGGTTGCCG ACGGTAATACCCTACCGGTGGACGGCTTCGGGAGAATTGAAGTGGATTTG GACCAACCTGGACGTACTACCAAGATGGTAAGAATGGACGATGTCGCGTA CGTGCCTGGACTCTCCCGAAACCTGGTGTCTACCGTCAAAGCTGTGGAGC AATGGGGAAAACCGTTAGTTTATTACAGGAATAGAGCCGTCTTGGGGCTC CCGGGGGAGGAGTCGCTTGTCTTCAAGGTCTGCCCCCGTAGGGGACTGTT TTCAGCAACAGGCGCGAGACGGATCGCGAGGCAGGAGACGTTTTTGGAGG CAAACCTGTCAGGAAAGGGATCGGTGAAGATCACTTCGGGAGCGGCGCTG AGAGCGGCCGCATCTCATGACGTCATGGAAGTTCACCGCATGCTTGCGCA CCCGAGCGAGGCCATCACAAGAAAGACGGCTGCTACGATTGGGATCGAGA CGACGGGCCAGTGGGGGGCGTGTGAGACCTGTTTCCAGGCCAAAGCAAAA CGACACGCCGTGCCCAAGAAGACGGAACAACGGGCGAGTGTGAAAGGACA GCGATTCTTCGTCGACGTGGGCGGGCCGATGAAACACTCGAGCCTAGGCG GGAACAATTACGTCGTCATTTTTGTGGACGACTGCACCCGCTTTAAGGTG GTGAAGTTCGTGAAGAAGAAAAGTGACGCAACGGCTGCCCTCTTGTCTCT GGTTGCAGACTATATCACACCGCAGAAGCTGTCGATTGAGTGCGTACGGA CGGACAATGGTGGCGAGTTTGAGGGAGAATTTTAGCGCGAACTGGACCGG CGCAGCATCACGCACGAGCATACCCCACCAGACACGCCGCAGTATAATGG GGTGGCCGAACGTGCGCTTGGACTTTTGAGAGAAAAGGCGATCATCCTGA TGGAGGAGCTAGACGACGTCATCAATGTGCCGCGAGAGAAGCTGTGGGCT CAGGCAATGCTTTTCGCATGCGACGTCACCAACAAGTCAGTCACGACGTC AACGAATGAGGGTAAGTCGCCGTATGAACTGTGGTTTGGGAAGTCCCCTA CTGCCAATCATTTGCGACCGTTTGGAGCGGTGGGATACGCACGACAGAGC GTGCGTGAACATAAGATGGCGCCAAAAGGGGAGAAATGCGTGTTCATGGG C
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Coding sequence (CDS) from alignment at F-serratus_M_contig1328:139035..140285-

>mRNA_F-serratus_M_contig1328.2437.1 ID=mRNA_F-serratus_M_contig1328.2437.1|Name=mRNA_F-serratus_M_contig1328.2437.1|organism=Fucus serratus male|type=CDS|length=1710bp|location=Sequence derived from alignment at F-serratus_M_contig1328:139035..140285- (Fucus serratus male)
ATGTCTCACACGCGCGCCGGAATGTCTAACTATAAGAAGGCTTCACCAGG
GACGAGCATTGAGGTTGCCGACGGTAATACCCTACCGGTGGACGGCTTCG
GGAGAATTGAAGTGGATTTGGACCAACCTGGACGTACTACCAAGATGGTA
AGAATGGACGATGTCGCGTACGTGCCTGGACTCTCCCGAAACCTGGTGTC
TACCGTCAAAGCTGTGGAGCAATGGGGAAAACCGTTAGTTTATTACAGGA
ATAGAGCCGTCTTGGGGCTCCCGGGGGAGGAGTCGCTTGTCTTCAAGGTC
TGCCCCCGTAGGGGACTGTTTTCAGCAACAGGCGCGAGACGGATCGCGAG
GCAGGAGACGTTTTTGGAGGCAAACCTGTCAGGAAAGGGATCGGTGAAGA
TCACTTCGGGAGCGGCGCTGAGAGCGGCCGCATCTCATGACGTCATGGAA
GTTCACCGCATGCTTGCGCACCCGAGCGAGGCCATCACAAGAAAGACGGC
TGCTACGATTGGGATCGAGACGACGGGCCAGTGGGGGGCGTGTGAGACCT
GTTTCCAGGCCAAAGCAAAACGACACGCCGTGCCCAAGAAGACGGAACAA
CGGGCGAGTGTGAAAGGACAGCGATTCTTCGTCGACGTGGGCGGGCCGAT
GAAACACTCGAGCCTAGGCGGGAACAATTACGTCGTCATTTTTGTGGACG
ACTGCACCCGCTTTAAGGTGGTGAAGTTCGTGAAGAAGAAAAGTGACGCA
ACGGCTGCCCTCTTGTCTCTGGTTGCAGACTATATCACACCGCAGAAGCT
GTCGATTGAGTGCGTACGGACGGACAATGGTGGCGAGTTTGAGGGAGAAT
TTTAGATGTCTCACACGCGCGCCGGAATGTCTAACTATAAGAAGGCTTCA
CCAGGGACGAGCATTGAGGTTGCCGACGGTAATACCCTACCGGTGGACGG
CTTCGGGAGAATTGAAGTGGATTTGGACCAACCTGGACGTACTACCAAGA
TGGTAAGAATGGACGATGTCGCGTACGTGCCTGGACTCTCCCGAAACCTG
GTGTCTACCGTCAAAGCTGTGGAGCAATGGGGAAAACCGTTAGTTTATTA
CAGGAATAGAGCCGTCTTGGGGCTCCCGGGGGAGGAGTCGCTTGTCTTCA
AGGTCTGCCCCCGTAGGGGACTGTTTTCAGCAACAGGCGCGAGACGGATC
GCGAGGCAGGAGACGTTTTTGGAGGCAAACCTGTCAGGAAAGGGATCGGT
GAAGATCACTTCGGGAGCGGCGCTGAGAGCGGCCGCATCTCATGACGTCA
TGGAAGTTCACCGCATGCTTGCGCACCCGAGCGAGGCCATCACAAGAAAG
ACGGCTGCTACGATTGGGATCGAGACGACGGGCCAGTGGGGGGCGTGTGA
GACCTGTTTCCAGGCCAAAGCAAAACGACACGCCGTGCCCAAGAAGACGG
AACAACGGGCGAGTGTGAAAGGACAGCGATTCTTCGTCGACGTGGGCGGG
CCGATGAAACACTCGAGCCTAGGCGGGAACAATTACGTCGTCATTTTTGT
GGACGACTGCACCCGCTTTAAGGTGGTGAAGTTCGTGAAGAAGAAAAGTG
ACGCAACGGCTGCCCTCTTGTCTCTGGTTGCAGACTATATCACACCGCAG
AAGCTGTCGATTGAGTGCGTACGGACGGACAATGGTGGCGAGTTTGAGGG
AGAATTTTAG
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