prot_F-serratus_M_contig1328.2436.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1328.2436.1
Unique Nameprot_F-serratus_M_contig1328.2436.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length282
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1328.2436.1 vs. uniprot
Match: D7FKD2_ECTSI (Coiled-coil domain 6-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKD2_ECTSI)

HSP 1 Score: 147 bits (370), Expect = 7.000e-39
Identity = 178/267 (66.67%), Postives = 199/267 (74.53%), Query Frame = 0 
Query:   12 PVSTPTRRSSLGSMPATSPGSPELEVSVLRRELLMEKHRNAHLEAELIKLRKSAVEISQQVEAEEECLINRVSKLLILFIDDCVMSMMKRLMELKKEKEDLALEVEREEELLTNTLQKKXNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKVVVEEQLLKERREVCSLSAEKKELETRIEAAAKTMLSSIGDMLDKTRQRPEQSSLSEAKELDTLRKQAEGLTNLAASSRARR 278
            PVSTPTR +S  S   TSPGSPELEVSVLRRELLMEKH+N+HLE EL+KLRKSAVEISQQVEAEEECLINR               MMKRLMELKKEKEDLALE               X XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K  VEEQL +ER EV +++AEK ELE   E  AK +LS + + +++   RPEQS+LS+A+EL+++        N A +SR RR
Sbjct:   23 PVSTPTRPASFPSC-TTSPGSPELEVSVLRRELLMEKHKNSHLEGELVKLRKSAVEISQQVEAEEECLINRTXXXXXXXXXXXX-XMMKRLMELKKEKEDLALEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKAAVEEQLAQERGEVKAVTAEKGELEILFEQGAKALLSKLQEAVERAHDRPEQSTLSQARELESMAAXXXXXANAATTSRERR 287
[Close]
BLAST of mRNA_F-serratus_M_contig1328.2436.1 vs. uniprot
Match: A0A835ZC40_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC40_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 3.670e-6
Identity = 43/87 (49.43%), Postives = 55/87 (63.22%), Query Frame = 0 
Query:   29 SPGSPELEV-SVLRRELLMEKHRNAHLEAELIKLRKSAVEISQQVEAEEECLINRVSKLLILFIDDCVMSMMKRLMELKKEKEDLAL 114
            S  S E+EV + L+R+LL EK R+A L  E+ ++R +A EISQ VEAEEE + NR               MMKRLM+LKKEKE LA+
Sbjct:    2 STDSAEVEVIAQLKRDLLAEKQRSAWLTKEVERMRHAAAEISQAVEAEEEMITNR---------------MMKRLMDLKKEKEQLAV 73
[Close]
BLAST of mRNA_F-serratus_M_contig1328.2436.1 vs. uniprot
Match: A0A7S2RXB8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RXB8_9STRA)

HSP 1 Score: 53.9 bits (128), Expect = 3.260e-5
Identity = 38/85 (44.71%), Postives = 48/85 (56.47%), Query Frame = 0 
Query:   31 GSPELEVSVLRRELLMEKHRNAHLEAELIKLRKSAVEISQQVEAEEECLINRVSKLLILFIDDCVMSMMKRLMELKKEKEDLALE 115
            G PE +V  LR EL  E+ RNA L  E+ +L++   E   Q E EEEC+INR               MMKRL +LK+EKE LA+E
Sbjct:   53 GDPE-DVDTLRMELTRERQRNASLAQEVQRLKRVCAESISQAETEEECIINR---------------MMKRLSDLKREKEALAIE 121
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1328.2436.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FKD2_ECTSI7.000e-3966.67Coiled-coil domain 6-like protein n=1 Tax=Ectocarp... [more]
A0A835ZC40_9STRA3.670e-649.43Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2RXB8_9STRA3.260e-544.71Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 51..71
NoneNo IPR availableCOILSCoilCoilcoord: 189..209
NoneNo IPR availableCOILSCoilCoilcoord: 153..173
NoneNo IPR availableCOILSCoilCoilcoord: 95..151
IPR019152Protein of unknown function DUF2046PFAMPF09755DUF2046coord: 158..226
e-value: 6.0E-6
score: 25.7
coord: 36..164
e-value: 3.2E-18
score: 66.0
IPR019152Protein of unknown function DUF2046PANTHERPTHR15276H4 D10S170 PROTEIN-RELATEDcoord: 32..85
coord: 97..162
coord: 154..225

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1328contigF-serratus_M_contig1328:96377..119530 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1328.2436.1mRNA_F-serratus_M_contig1328.2436.1Fucus serratus malemRNAF-serratus_M_contig1328 95575..121023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1328.2436.1 ID=prot_F-serratus_M_contig1328.2436.1|Name=mRNA_F-serratus_M_contig1328.2436.1|organism=Fucus serratus male|type=polypeptide|length=282bp
MEKMSSSNVPTPVSTPTRRSSLGSMPATSPGSPELEVSVLRRELLMEKHR
NAHLEAELIKLRKSAVEISQQVEAEEECLINRVSKLLILFIDDCVMSMMK
RLMELKKEKEDLALEVEREEELLTNTLQKKLNQLRQEKVDLENQLEREQE
YVVNKLRKQLAQVTADKERMAMEVEREEEFLTNKLVKKLDQIKLEKVVVE
EQLLKERREVCSLSAEKKELETRIEAAAKTMLSSIGDMLDKTRQRPEQSS
LSEAKELDTLRKQAEGLTNLAASSRARRVNL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019152DUF2046