prot_F-serratus_M_contig1321.2413.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1321.2413.1
Unique Nameprot_F-serratus_M_contig1321.2413.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length92
Homology
BLAST of mRNA_F-serratus_M_contig1321.2413.1 vs. uniprot
Match: A0A6H5JXP3_9PHAE (GH5 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXP3_9PHAE)

HSP 1 Score: 147 bits (372), Expect = 1.770e-43
Identity = 61/87 (70.11%), Postives = 76/87 (87.36%), Query Frame = 0
Query:    6 DPTTFRCELDPKLTKENLPFFIPDIEGTWGAACGRNRGVFVLKPADGHTYNCGKLPEAWGVSDVSDITDLNKTTPATALKAYGNLVE 92
            DP +FRC+LDPKLT+++LPFFIPDI+GTWG+ACGRNRGVFV++P DGHTY+CG +P  WGVS+ +DI +L KT PA ALKAYGN V+
Sbjct:    2 DPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVEPPDGHTYDCGNMPADWGVSNAADIANLTKTKPAVALKAYGNFVD 88          
BLAST of mRNA_F-serratus_M_contig1321.2413.1 vs. uniprot
Match: D8LEF5_ECTSI (Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEF5_ECTSI)

HSP 1 Score: 146 bits (369), Expect = 2.080e-39
Identity = 60/87 (68.97%), Postives = 76/87 (87.36%), Query Frame = 0
Query:    6 DPTTFRCELDPKLTKENLPFFIPDIEGTWGAACGRNRGVFVLKPADGHTYNCGKLPEAWGVSDVSDITDLNKTTPATALKAYGNLVE 92
            DP +FRC+LDPKLT+++LPFFIPDI+GTWG+ACGRNRGVFV++P DGHTY+CG +P  WGVS+ +DI +L KT P+ ALKAYGN V+
Sbjct:    2 DPGSFRCKLDPKLTEKDLPFFIPDIQGTWGSACGRNRGVFVVQPPDGHTYDCGNMPADWGVSNAADIANLTKTQPSVALKAYGNFVD 88          
BLAST of mRNA_F-serratus_M_contig1321.2413.1 vs. uniprot
Match: A0A836CCQ8_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCQ8_9STRA)

HSP 1 Score: 108 bits (270), Expect = 1.500e-25
Identity = 48/93 (51.61%), Postives = 60/93 (64.52%), Query Frame = 0
Query:    1 GNAGFDPTTFRCELDPKLTKENLPFFIPDIEGTWGAACGRNRGVFVLKPADGHTYNCGKLPEAWG-VSDVSDITDLNKTTPATALKAYGNLVE 92
            GNAG  P    C LDPKLT E LPFFIPDI   WG+ CGRNRGVFV  P DGHTY+C  LPE WG  ++V+++ +        A++   N+V+
Sbjct:   50 GNAGIGPKNQHCVLDPKLTPETLPFFIPDIRQAWGSLCGRNRGVFVTDPPDGHTYSCNDLPERWGPAANVNEVLNQTLVPANVAVETIENIVK 142          
BLAST of mRNA_F-serratus_M_contig1321.2413.1 vs. uniprot
Match: A0A4D9D2R7_9STRA (Cellulase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2R7_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 1.800e-19
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 0
Query:   12 CELDPKLTKENLPFFIPDIEGTWGAACGRNRGVFVLKPADGHTYNCGKLPEAWGVSDVSDITDLNKTTPATALKAY 87
            C LDPK+T   +  F  +I   WG ACGRNRGVF+L+PADG TY+CG LPE+WG+ +V  +         TAL  Y
Sbjct:    3 CRLDPKVTASTILDFQTEIGELWGGACGRNRGVFILEPADGKTYDCGNLPESWGIPNVGSLLSAQPAKAVTALTNY 78          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1321.2413.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JXP3_9PHAE1.770e-4370.11GH5 protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP... [more]
D8LEF5_ECTSI2.080e-3968.97Exo-1,3-beta-glucanase, family GH5 n=1 Tax=Ectocar... [more]
A0A836CCQ8_9STRA1.500e-2551.61Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A4D9D2R7_9STRA1.800e-1950.00Cellulase domain-containing protein n=2 Tax=Monodo... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1321contigF-serratus_M_contig1321:254911..256354 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1321.2413.1mRNA_F-serratus_M_contig1321.2413.1Fucus serratus malemRNAF-serratus_M_contig1321 254909..256354 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1321.2413.1 ID=prot_F-serratus_M_contig1321.2413.1|Name=mRNA_F-serratus_M_contig1321.2413.1|organism=Fucus serratus male|type=polypeptide|length=92bp
GNAGFDPTTFRCELDPKLTKENLPFFIPDIEGTWGAACGRNRGVFVLKPA
DGHTYNCGKLPEAWGVSDVSDITDLNKTTPATALKAYGNLVE
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