mRNA_F-serratus_M_contig1320.2407.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1320.2407.1 vs. uniprot
Match: D8LBI8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI8_ECTSI) HSP 1 Score: 851 bits (2199), Expect = 7.490e-273 Identity = 582/1004 (57.97%), Postives = 626/1004 (62.35%), Query Frame = 1
Query: 1591 ALLAAGGFHVLWRLSSDPAATPTGVALALGALCQGVRHADVLRVFLTTWDEVEVLDPSAEDEAQEEKELDRLGGYEACALVLSGPVAHPSALSRVRSIMQFVGIVECLKHVRSLAAKAGAVAVAAASAAVVDVKAGPSSSSVTTRDKARGGGVSVAGPTAVKVMEELAHALGALEALLAEGAGDTSASGIQPGLGKGDRKRRLQGFEVLQAKVDAKSEGSDNAAAAPSPDGHGTAASSGNATVNRKKGDGVAESDGPSVAAAISAHRGREVVRDRRPRGGLAPSLVGLLWEHQLPAALAAGVALAARASEREAAAAVISMARTRADDAEAGIGGRECSRGEGSGEGPGSTAAALVFAAVRQVTLRLLRGAGDPLSGALVFAGQPRSTAALACALDPTSLATPVGPEGTATMESLADGLDETLVTPGGLARLLVRSCQASAAADLALNAINVQ--------------------RYKTGASANEAATVGGGILSAAGGAAFLSGGAEGDTTAALRKLHELGPSPAGRSFACEVMCRHTLSAVLHPSPGGGRAAVTVTTSLLLWLLEGDQESSSEVLAERWGALRSRVAALAGEVGWADSLSHRLYLMHKAMAMVAYDSGKKSNKISSGSGSTGSGSGFGGDELPRAGAMMAGLARQSQQLAVYIGLEDPPDAGDFTC----------GKLRGDYNNSSSATDAATSLKALGGPQP-------------------------------------------RTEEXXXXXXXXVIVALTLRLKVLALAASRGLGASYSAFAGGAAVPALAGLVEILAFGLAKAGANRALAHRVR---LARAGRAAPKXXXXXXXXXXXPRLKDPSKEPLLLVGDLFTVPGPGEAEEMEIRWEQEPGGRVSEQRGIEAAEHEARLLACAVPALRLLRHCLGRLSDAGAKPPAGPLDAVGALLDFEAALAMLPLDPPPPSPPSGGTATGA------WDFEATPVVGLALRAESLVLSCCRL 4356
ALLAAGGFHVLWRL DPAATP GVALALGALCQG+RHADVLRVFLT W+E V D + EA+ L RLGGYEACA VLS VAHP+ALSR RSIMQ+V +VECL+ VR LA KAG VAAA AA K G GP AVK ME+LAHALGALEAL++EGAG+TSASGIQPG+ KGDRKRRLQGFEVL AK RD+RPRGGLAPSLV LLWEHQLPAALAAGVA ALVFA VRQV LRLLRGAGDPLSGALVFAGQPRSTAALA LDP++LATPVGPE + T+E+LADGLD+TLVTPGGLARLLVRSCQA +AADLAL+ + KTG G + LSGGAE D TAALRKLHELGPS AGRS CEV CR L AVL+P PGGGRA+VTVTTSLLLWLLEGDQES S+VLAERWG+LRSRV ALA EVGW+DSLSHRLYL H AM MVA D+ K + S G GSG +LPRAG MMAGLARQS LAVY+GLED PDA GK+ + SS T + T + G QP XXXXXXXX IVALTLRLKVLALAASRGLGASY AFAGGAAVPALAGLVEILAFGLAKAGANRALAHR + L XXXXXXX PRLKDPSKEPLLLVGDLFT PGPGEAEE E+RWEQEPGG VSEQRG+EAAEHEARLL CA+PALRLLRHCLGRLSDAGA+PP GPLDAVGALLDFEAALAMLPLD PP S P G + WD ATP V LALRAE+LVLS CRL
Sbjct: 508 ALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEG-VDDGAGGAEAEG---LSRLGGYEACASVLSRQVAHPAALSRGRSIMQYVALVECLQLVRKLATKAGTT-VAAAKAAEATGKDGX----XXXXXXXXXXXXXXXGPAAVKGMEDLAHALGALEALMSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAKA----------------------------------------------------------ARDKRPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGAGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPESSPTIEALADGLDQTLVTPGGLARLLVRSCQALSAADLALSTADKSPQAGRGGMVIDGXXXXXXXXXXKTGXXXXXXXXXXAGATTG-----ILSGGAEADMTAALRKLHELGPSLAGRSSVCEVACRFALPAVLNPPPGGGRASVTVTTSLLLWLLEGDQESCSDVLAERWGSLRSRVDALADEVGWSDSLSHRLYLFHTAMGMVAMDAKKPAAAXXXXXXSKGGGSG----DLPRAGEMMAGLARQSHTLAVYLGLEDVPDASGSLLTPRCPRYHRRGKVHHTHTPFSSLTFSVTIRRGGGHEQPFPLNTNXXXXXXXXXXXXXXXXTAADGDAXXXXXXXXXXXXXXXXXXXXXXXXXXXIVALTLRLKVLALAASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANRALAHRQQPQPLXXXXXXXXXXXXXXXXAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEQEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDVKPSPSRGESWDLGATPSVALALRAEALVLSSCRL 1432
BLAST of mRNA_F-serratus_M_contig1320.2407.1 vs. uniprot
Match: A0A6H5JNJ9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNJ9_9PHAE) HSP 1 Score: 806 bits (2081), Expect = 2.310e-254 Identity = 582/1088 (53.49%), Postives = 637/1088 (58.55%), Query Frame = 1
Query: 1579 PGP-RALLAAGGFHVLWRLSSDPAATPTGVALALGALCQGVRHADVLRVFLTTWDEVEVLDPSAEDEAQEEKELDRLGGYEACALVLSGPVAHPSALSRVRSIMQFV------GIVECLKHVRSLAAKAGAVAVAAASAAVVDVKAGPSSSSVTTRDKARGGGVSVAGPTAVKVMEELAHALGALEALLAEGAGDTSASGIQPGLGKGDRKRRLQGFEVLQAKVDAKSEGSDNAAAAPSPDGHGTAASSGNATVNRKKGDGVAESDGPSVAAAISAHRGREVVRDRRPRGGLAPSLVGLLWEHQLPAALAAGVALAARASEREAAAAVISMARTRADDAEAGIGGRECSRGEGSGEGPGSTAAALVFAAVRQVTLRLLRGAGDPLSGALVFAGQPRSTAALACALDPTSLATPVGPEGTATMESLADGLDETLVTPGGLARLLVRSCQASAAADLALNAINVQRYKTGASANEAATVGGGILS-------------AAGGAAFLSGGAEGDTTAALRKLHELGPSPAGR-------SFACEVMCRHTLSAVLHPSPGGGRAAVTVTTSLLLWLLEGDQESSSEVLAERWGALRSRVAALAGEVGWADSLSHRLYLMHKAMAMVAYDSGKKSNKISSGSGSTGSGSGFGGDELPRAGAMMAGLARQSQQLAVYIGLEDPPDAG-----------DFTCGKLRGDYNNSSSAT--------------------------DAATSL-KALGGPQPRTEEXXXXXXXXVIVALTLRLKVLALAASRGLGASYSAFAGGAAVPALAGLVEILAFGLAKAGANRALAHRVRLARAGRAA-------------------------------------------------------------------------------------------PKXXXXXXXXXXXPRLKDPSKEPLLLVGDLFTVPGPGEAEEMEIRWEQEPGGRVSEQRGIEAAEHEARLLACAVPALRLLRHCLGRLSDAGAKPPAGPLDAVGALLDFEAALAMLPLDPPPPSPPSGG------TATGAWDFEATPVVGLALRAESLVLSCCRL 4356
P P RALLAAGGFHVLWRL DPAATP GVALALGALCQG+RHADVLRVFLT W+E V D + EA+ L RLGGYEACA VLS VAHP+ALSR RSIM G + R + G + AGP AVK ME+LAHALGALEAL++EGAG+TSASGIQPG+ KGDRKRRLQGFEVL AK DAK+ G ++ AAP ++ N K SD P+VAAAISAH GRE RD++PRGGLAPSLV LLWEHQLPAALAAGVA ALVFA VRQV LRLLRG+GDPLSGALVFAGQPRSTAALA LDP++LATPVGPEG+ T+E+LADGLD+ L +AADLAL+ + K+ + A + GG A LSGGAE D TAALRKLHELGPS AGR S CEV+CR L AVL P PGGGRA+VTVTTSLLLWLLEGDQES S+VLAERWG LRSRV ALA EVGW+DSLSHRLYL H AM MVA D+ K + S G GSG +LPRAG MMAGLARQS LAVY+GLED P+A F+ RG + S DAA+ + K QPR XXXXXXX VIVALTLRLKVLALAASRGLGASY AFAGGAAVPALAGLVEILAFGLAKAGANRALAHRVRLARAGRAA XXXXX PRLKDPSKEPLLLVGDLFT PGPGEAEE E+RWE+EPGG VSEQRG+EAAEHEARLL CA+PALRLLRHCLGRLSDAGA+PP GPLDAVGALLDFEAALAMLPLD PP S P G + +WDF ATP V LALRAE+LVLS CRL
Sbjct: 489 PSPARALLAAGGFHVLWRLPLDPAATPMGVALALGALCQGIRHADVLRVFLTRWEEG-VDDGAGGAEAEG---LSRLGGYEACASVLSRQVAHPAALSRGRSIMHRGEGGGGDGQGRECRWGRGGCRRGGG--------GXXXXXXXXXXXXXXXXXXXXAAAAAAAGPAAVKGMEDLAHALGALEALVSEGAGETSASGIQPGIRKGDRKRRLQGFEVLLAKADAKT-GDASSTAAP------------DSNSNNK-------SDDPNVAAAISAHLGREAARDKQPRGGLAPSLVALLWEHQLPAALAAGVAXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVFAGVRQVALRLLRGSGDPLSGALVFAGQPRSTAALAYGLDPSALATPVGPEGSPTIEALADGLDQAL-----------------SAADLALSTAD----KSPEAGRGGAVIDGGXXXXXXXXXXXXXXXVAGATTGILSGGAEADMTAALRKLHELGPSLAGRCDVVVKRSSVCEVICRFALPAVLKPLPGGGRASVTVTTSLLLWLLEGDQESCSDVLAERWGLLRSRVDALADEVGWSDSLSHRLYLFHTAMGMVALDAKKPAAAAGGSKRSKGGGSG----DLPRAGEMMAGLARQSHTLAVYLGLEDVPEASAHHTHPPFSSLTFSVTIRRGGGHEQPSPFNTXXXXXXXXXXXXXXXXXXXXXXDGDAASIIRKPPPALQPRXXXXXXXXXXPVIVALTLRLKVLALAASRGLGASYPAFAGGAAVPALAGLVEILAFGLAKAGANRALAHRVRLARAGRAAVAARAELTSESARARLAARKAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEPAAQPPRLKDPSKEPLLLVGDLFTAPGPGEAEEGELRWEKEPGGVVSEQRGLEAAEHEARLLTCALPALRLLRHCLGRLSDAGAEPPVGPLDAVGALLDFEAALAMLPLDLPPSSLPPGSDGKPSPSREESWDFGATPSVALALRAEALVLSSCRL 1516
BLAST of mRNA_F-serratus_M_contig1320.2407.1 vs. uniprot
Match: A0A7S4DEG1_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DEG1_HETAK) HSP 1 Score: 96.7 bits (239), Expect = 2.100e-18 Identity = 53/128 (41.41%), Postives = 75/128 (58.59%), Query Frame = 3
Query: 123 LGPGQHFKDGGEVDEVKFREAVVVRIIHVVPKGETPVQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSAPFDTLMPTANVIGGAVYTLPHEIITNHLVIRGYFQAMSVVICGTVVPRSALSPSAVQAL 506
+G QH ++DE+ FREAVVV+ +VP G P +LP F+ +TQ+E F LEVF K+L++ FD L P GG + E ITNHL++RG + A+S+ + G V+PR LSP + L
Sbjct: 10 VGDFQHKDLEIDIDEITFREAVVVKGFQIVPAGTNPHPETLP-NFKSVTQSEKFNLEVFAKDLSSPGKTSFDRLTPRFEGQGGVTFNTQDEQITNHLILRGSYTALSICLYGNVIPRPQLSPEVLATL 136
BLAST of mRNA_F-serratus_M_contig1320.2407.1 vs. uniprot
Match: A0A1Y1IHP4_KLENI (VIR_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IHP4_KLENI) HSP 1 Score: 66.2 bits (160), Expect = 6.020e-7 Identity = 44/132 (33.33%), Postives = 64/132 (48.48%), Query Frame = 3
Query: 90 QVLFFDEFTHRLGPGQHFKDGGEVDEVKFREAVVVRIIHVVPKGETPVQVSLPPTFRGITQTEPFQLEVFCKNLNNLQSAPFDTLMPTANVI--GGAVYTLPHEIITNHLVIRGYFQAMSVVICGTVVPRSA 479
+VL+ D F H VDEV F++ V+V H+VPK P L F +T PF L+VF N + ++ F L P + + GG P ++T HLV RG +Q +S++I G +P A
Sbjct: 2 EVLYCDSFLHEAA-------ADHVDEVLFKKPVIVSACHIVPKDGNPEPELL--EFFSLTSPPPFNLQVFYHN-GDQNASHFQKLGPQISWVADGGKESIDPQPVVTRHLVFRGNYQNLSLIIYGATIPDEA 123 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1320.2407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1320.2407.1 >prot_F-serratus_M_contig1320.2407.1 ID=prot_F-serratus_M_contig1320.2407.1|Name=mRNA_F-serratus_M_contig1320.2407.1|organism=Fucus serratus male|type=polypeptide|length=824bp MQFVGIVECLKHVRSLAAKAGAVAVAAASAAVVDVKAGPSSSSVTTRDKAback to top mRNA from alignment at F-serratus_M_contig1320:251528..267378+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1320.2407.1 ID=mRNA_F-serratus_M_contig1320.2407.1|Name=mRNA_F-serratus_M_contig1320.2407.1|organism=Fucus serratus male|type=mRNA|length=15851bp|location=Sequence derived from alignment at F-serratus_M_contig1320:251528..267378+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1320:251528..267378+ >mRNA_F-serratus_M_contig1320.2407.1 ID=mRNA_F-serratus_M_contig1320.2407.1|Name=mRNA_F-serratus_M_contig1320.2407.1|organism=Fucus serratus male|type=CDS|length=4944bp|location=Sequence derived from alignment at F-serratus_M_contig1320:251528..267378+ (Fucus serratus male)back to top |