mRNA_F-serratus_M_contig1014.239.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1014.239.1 vs. uniprot
Match: D7FQR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQR7_ECTSI) HSP 1 Score: 276 bits (705), Expect = 1.370e-83 Identity = 165/260 (63.46%), Postives = 203/260 (78.08%), Query Frame = 3 Query: 606 EVKGLRRDVAAADRERSVWKRRDDDLSLTLARLENRCEALEVNLRAESDAADVEAARAKSAEDRFQKLLAWARKEEGRRRLAEDKLATVREEGRALEARMGVAKNEAIVGKRQLDARRLHLEGALEDLRRRTAEKERLDEQTKLMRGEVMALRELADGRGLELRELREKMARLVEEAKCMSSENIKVRKQLNGERERWRTAERSRVAQEHRRQMEVERKTDDVHALRYRLQELEMRLSSEIAMRQGAEEDARRSQQMEQR 1385 E+ LRRDVA+A++ER+ WK RDD LSLT++RLE RCEALE ++RAES+AA E R K+AE RF +LL WAR+EE R AE+ L E GRALEAR V + EA KRQLD RRL +EGALEDLRRRTAE ERL+ Q K + G+V ALRELAD RGLE++E+REK+ARLV EAK MS EN+ +RK ++ E+ERWR AERSR Q+ RR++E+++K DD+HALRYR+QELE RLS E A R GAEEDARRSQ+ME+R Sbjct: 6 EMDDLRRDVASANQERAAWKLRDDGLSLTISRLEGRCEALERSVRAESEAAKAEVGRTKAAEARFARLLEWAREEEKHRVQAEEVLGRACESGRALEARGKVLEKEAHESKRQLDERRLKMEGALEDLRRRTAENERLEAQAKTVGGQVDALRELADARGLEVKEMREKLARLVREAKRMSQENVDLRKHMSSEQERWRAAERSRAKQDERRRIELDQKCDDLHALRYRVQELEARLSRETARRHGAEEDARRSQEMERR 265
BLAST of mRNA_F-serratus_M_contig1014.239.1 vs. uniprot
Match: A0A6H5JWK7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWK7_9PHAE) HSP 1 Score: 251 bits (642), Expect = 1.850e-71 Identity = 165/304 (54.28%), Postives = 204/304 (67.11%), Query Frame = 3 Query: 675 DDLSLTLARLENRCEALEVNLRAESDAADVEAARAKSAEDRFQKLLAWARKEEGRRRLAEDKLATVREEGRALEARMGVAKNEAIVGKRQLDARRLHLEGALEDLRRRTAEKERLDEQTKLMRGEVMALRELADGRGLELRELREKMARLVEEAKCMSSENIKVRKQLNGERERWRTAERSRVAQEHRRQMEVERKTDDVHALRYRLQELEMRLSSEIAMRQGAEEDARRSQQMEQRSAEELMEIRKAQKPSQPVLSNRSYPVQNSIPWVDNPALSADSP-----WPSW------TGGRGTAAA 1553 D LS ++RLE RCE LE ++RAES+AA E R K AE RF +LLAWAR+EE R AE+ L E + LEAR + EA KRQLD RRL +EGALEDLRRRTAE ERL+ Q K + G+V ALRELAD RGLE++E+REK ARLV+EAK MS EN+ +RK +N E+ERWR AERSR Q+ RR++E+++K DD+HALRYR+QELE RL+ E R GAEEDARRSQ+ME+RS +EL+E RKA Q + + S P+ PA +P W W TGG T AA Sbjct: 15 DGLSRAISRLEGRCEELERSVRAESEAAKAEVGRTKVAEARFARLLAWAREEEADRLRAEEALGKACESRQVLEARGKALEEEAHESKRQLDERRLKMEGALEDLRRRTAENERLEAQAKTLGGQVDALRELADARGLEVKEMREKFARLVKEAKRMSQENVDLRKHMNSEQERWRAAERSRAKQDERRRIELDQKCDDLHALRYRVQELEARLTRETTRRHGAEEDARRSQEMERRSMDELLEGRKAALSVQTRIG-----LAQSHPYHSGPAAGGQTPAPEHAWKPWGSRDNATGGTATTAA 313 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1014.239.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1014.239.1 >prot_F-serratus_M_contig1014.239.1 ID=prot_F-serratus_M_contig1014.239.1|Name=mRNA_F-serratus_M_contig1014.239.1|organism=Fucus serratus male|type=polypeptide|length=643bp MGRQRGRGRDLGDKANSSSLSNEYESGATVYSKWSGEESMNSQQSKHKAPback to top mRNA from alignment at F-serratus_M_contig1014:175287..185457+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1014.239.1 ID=mRNA_F-serratus_M_contig1014.239.1|Name=mRNA_F-serratus_M_contig1014.239.1|organism=Fucus serratus male|type=mRNA|length=10171bp|location=Sequence derived from alignment at F-serratus_M_contig1014:175287..185457+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1014:175287..185457+ >mRNA_F-serratus_M_contig1014.239.1 ID=mRNA_F-serratus_M_contig1014.239.1|Name=mRNA_F-serratus_M_contig1014.239.1|organism=Fucus serratus male|type=CDS|length=3858bp|location=Sequence derived from alignment at F-serratus_M_contig1014:175287..185457+ (Fucus serratus male)back to top |