prot_F-serratus_M_contig132.2391.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig132.2391.1
Unique Nameprot_F-serratus_M_contig132.2391.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length473
Homology
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: D8LEX7_ECTSI (RING-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEX7_ECTSI)

HSP 1 Score: 309 bits (792), Expect = 1.160e-96
Identity = 221/467 (47.32%), Postives = 261/467 (55.89%), Query Frame = 0
Query:    7 VAIVVGCGVLTLVILCIVRKIMDLCLMRFDPTGSISYSQEEGLPKATIERLPQTRYRKPPPKVQVKAAKIGAKHDGPASIGA------AAVIGDVSSVSVTEAGEERGSTNSVPVVAAAAAGAEESAADG-RDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEARKSCCERAMRSASDRFGIRLVAPTTVRFSSSRRTYTNRDVHDATGPSLPSSYGQSDVDYVGSMVGTMVDSHRGGNTADEEAGEASGGRAAGARLG----------------VGSRSESATRIPSARGGIAAGGEGQQDEPQGAIVVQPVAGSSFLVVPREFSGGAGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIAPASGMVVADGGGEGEEKGGDGGDPQARTAGGANVGAGRSRSRGRRSSXXGGSRRAGXGVRDGLGGVVFGGNTQEFKEAEA 450
            ++IVVGCGVLTL++LC+VRK+MDLCL+R DPTGS+ YSQEEGL K +IERLPQTRY++P   V   A K G K   PAS G       AA  G+   V+ ++     GS+ + P  A  A GAE    +G RDSTEDMCAICL+EYE GD+LRIIPGC H FHKECIDPWLETKAVCAYCKA VEAR++CC+R  RS SDR GI LVAPTT+RFSSSRRTYTN DV  A GP+LP+SYG S++DYVGS V     S       D EAGE  GG A                       GS S  +TR     G I    +G Q  PQG+IVVQP +  S++VVPRE+S G  G+                                 P       D   E EE   +  +                    RR S  G S        DG GGVVFGGNT+EF+EA A
Sbjct:   63 ISIVVGCGVLTLILLCVVRKVMDLCLLRNDPTGSLRYSQEEGLTKRSIERLPQTRYKRP---VSGTAQKKGDKKT-PASDGKKPDDTEAAAAGEEGGVTGSDLHGPPGSSTAAPKTAVVA-GAEGGEGEGARDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRVYRSVSDRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQAS------VDVEAGE--GGEAEAXXXXXXXXXXXXXXFXXXXPAGSGSTRSTR-----GAIVLPDQGGQ--PQGSIVVQPASAPSYVVVPREYSLGGDGIDEEYPGNGGEGLAGSSTRELASSAARASTTEGLPDDVAQATDATEEKEEIVAEAAEE-------------------RRGSHKGFS--------DGRGGVVFGGNTEEFREAAA 482          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: A0A6H5KYP0_9PHAE (RING-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYP0_9PHAE)

HSP 1 Score: 309 bits (791), Expect = 2.590e-94
Identity = 219/468 (46.79%), Postives = 265/468 (56.62%), Query Frame = 0
Query:    7 VAIVVGCGVLTLVILCIVRKIMDLCLMRFDPTGSISYSQEEGLPKATIERLPQTRYRKPPPKVQVKAAKIGAKH----DGPASIGA-AAVIGDVSSVSVTEA-GEERGSTNS--VPVVAAAAAGAEESAADGRDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEARKSCCERAMRSASDRFGIRLVAPTTVRFSSSRRTYTNRDVHDATGPSLPSSYGQSDVDYVGSMVG---TMVDSHRGGNTADEEAGEASGGRAAGARLGVGSRSESATRIPSARGGIAAGGEGQQDEPQGAIVVQPVAGSSFLVVPREFSGGAGGVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRIAPASGMVVADGGGEGEEKGGDGGDPQARTAGGANVGAGRSRSRGRRSSXXGGSRRAGXGVRDGLGGVVFGGNTQEFKEAEAEDRARQEAGTGTG 463
            ++IVVGCGVLTL++LC+VRK+MDLCL+R DPTGS+ YSQEEGL K +IERLP+TRY++P   V   A K G K     DG    G  AA  G+   V+ ++  G   G T +    VV AA  G  E A   RDSTEDMCAICL+EYE GD+LRIIPGC H FHKECIDPWLETKAVCAYCKA VEAR++CC+R  RS S+R GI LVAPTT+RFSSSRRTYTN DV  A GP+LP+SYG S++DYVGS V      VD   G     E     +   A G   G G  + S +   S RG I    +G Q + +G+IVVQP +  S++VVPRE+S G GG+                                 P       D   E EE   +   P+ R                       GS++   G  DG GGVVFGGNT+EF+EAEA       AG   G
Sbjct:  256 ISIVVGCGVLTLILLCVVRKVMDLCLLRNDPTGSLRYSQEEGLTKRSIERLPETRYKRP---VSGSAQKKGGKKTPAADGKKPDGTEAAAAGEEGGVTGSDLHGAPAGRTGAPQTAVVLAAEGGEREGA---RDSTEDMCAICLVEYETGDELRIIPGCGHRFHKECIDPWLETKAVCAYCKANVEARRTCCDRIYRSVSNRLGINLVAPTTIRFSSSRRTYTNEDVQLAMGPTLPASYGHSEMDYVGSAVAPRQASVDVEAGEGVEAEATTPITADAAPGQAFGGGGPARSGS-TRSTRGAIVLPDQGGQPQ-EGSIVVQPASAPSYVVVPREYSLG-GGIDNEHPGNGGEGPVGSSMRELTSSSARASATERPPDEVARATDATEEKEEIVAEA--PEERR----------------------GSQK---GFSDGRGGVVFGGNTEEFREAEAXXXXXXMAGARNG 687          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: A0A835ZK41_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK41_9STRA)

HSP 1 Score: 80.9 bits (198), Expect = 4.370e-13
Identity = 63/183 (34.43%), Postives = 82/183 (44.81%), Query Frame = 0
Query:   11 VGCGVLTLVILCIVRKIMDLCLMRFDPTGS-ISYSQEEGLPKATIERLPQTRYRKPPPKV--QVKAAKIGAKHDGPASI------GAAAVIGDVSSVSVTEAGEERGSTNSVPVVAAAAAGAEESAADGRDSTED-MCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATV 183
            V C  LT   L ++RK++ L     DP  + ++ S  EGL    I  +P   +  P         AA  GA  D    +      GAA              G+  G          AA G  E    GR+   D MCAICL ++E GD LR++P C H +HK C+DPWLETKA+C  CK  V
Sbjct:  126 VACTALTCAFLIVLRKLIRLYAWWRDPAAAALASSAHEGLSSLVISWIPVVTFVSPGGDACCAAPAAAXGAGADAATGVDAEPACGAADXXXXXXXXXXXRGGDAEGX---------AAMGDVEG---GREGVGDLMCAICLADFEGGDQLRVVPHCFHQYHKACLDPWLETKAICPLCKQRV 296          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: A0A8J5S5L1_ZIZPA (RING-type domain-containing protein n=1 Tax=Zizania palustris TaxID=103762 RepID=A0A8J5S5L1_ZIZPA)

HSP 1 Score: 79.0 bits (193), Expect = 2.760e-12
Identity = 29/47 (61.70%), Postives = 37/47 (78.72%), Query Frame = 0
Query:  138 CAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVE 184
            CA+CL+E+E GDDLR++P C H FH ECIDPWLET+  C  C+A +E
Sbjct:  128 CAVCLMEFEDGDDLRLLPHCSHAFHPECIDPWLETRVTCPLCRANLE 174          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: UPI001F5D7E2B (E3 ubiquitin-protein ligase EL5-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5D7E2B)

HSP 1 Score: 74.3 bits (181), Expect = 6.280e-12
Identity = 39/89 (43.82%), Postives = 51/89 (57.30%), Query Frame = 0
Query:  113 VPVVAAAAAGAEESAADGRDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEARKSCCERAMRSASDRF 201
            V V   AA GAEE A          CA+CL+E+ HG+  R++PGC H FH  CI+PWL  ++ C  C+A V   +S    A  SA+DRF
Sbjct:   92 VHVATPAAGGAEEKA---------ECAVCLVEFAHGEAGRLVPGCGHGFHAACIEPWLRVRSTCPLCRAAVVEERS----AGLSAADRF 167          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: A0A1S3UJJ9_VIGRR (RING-type E3 ubiquitin transferase n=1 Tax=Vigna radiata var. radiata TaxID=3916 RepID=A0A1S3UJJ9_VIGRR)

HSP 1 Score: 73.6 bits (179), Expect = 1.160e-11
Identity = 28/58 (48.28%), Postives = 41/58 (70.69%), Query Frame = 0
Query:  124 EESAADGRDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKA 181
            +E  A+G+D  +D CA+CL E+E G++LR +P C H FH  CIDPWL +++ C  C+A
Sbjct:   75 DEMPAEGQDDEDDTCAVCLGEFEDGEELRTLPECMHSFHVACIDPWLSSRSSCPVCRA 132          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: A0A836C7Z7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C7Z7_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 2.120e-11
Identity = 27/46 (58.70%), Postives = 35/46 (76.09%), Query Frame = 0
Query:  138 CAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATV 183
            CAICL E+E GD LR++P C HH+HK C+DPWLE++ +C  CK  V
Sbjct:  121 CAICLNEFETGDVLRVVPRCNHHYHKACLDPWLESRGICPLCKQLV 166          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: A0A3B6KBX6_WHEAT (RING-type domain-containing protein n=1 Tax=Triticum aestivum TaxID=4565 RepID=A0A3B6KBX6_WHEAT)

HSP 1 Score: 71.6 bits (174), Expect = 3.910e-11
Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 0
Query:  123 AEESAADGRDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEARKS 188
            A E + D  D+T   CA+CL EY  GD+LR +PGCKH FH+ C+D WL  +  C  C+ +  A ++
Sbjct:   87 AAEPSPDDTDTTHTTCAVCLAEYADGDELRRLPGCKHAFHRLCVDEWLRRRPSCPLCRTSPPATRA 152          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: UPI001F5CDF93 (E3 ubiquitin-protein ligase EL5-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5CDF93)

HSP 1 Score: 72.0 bits (175), Expect = 3.910e-11
Identity = 27/59 (45.76%), Postives = 41/59 (69.49%), Query Frame = 0
Query:  124 EESAADGRDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKAVCAYCKAT 182
            EE AAD        CA+CL +YEHG++LR++PGC+H FH++C+D WL  +  C  C+++
Sbjct:   87 EEEAADST-----RCAVCLADYEHGEELRLLPGCRHSFHRQCVDVWLRRRPSCPLCRSS 140          
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Match: A0A835EKD1_9POAL (RING-type domain-containing protein n=2 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835EKD1_9POAL)

HSP 1 Score: 72.4 bits (176), Expect = 4.790e-11
Identity = 29/58 (50.00%), Postives = 42/58 (72.41%), Query Frame = 0
Query:  130 GRDSTEDMCAICLIEYEHGDDLRIIPGCKHHFHKECIDPWLETKA-VCAYCKATVEAR 186
            G ++ E  CA+CL EY  G+++R++P C+H FH+EC+D WL T+A  C  C+ATV AR
Sbjct:  119 GEEAPEGECAVCLGEYAAGEEVRVLPACRHGFHRECVDRWLLTRAPTCPVCRATVAAR 176          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig132.2391.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LEX7_ECTSI1.160e-9647.32RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5KYP0_9PHAE2.590e-9446.79RING-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A835ZK41_9STRA4.370e-1334.43RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A8J5S5L1_ZIZPA2.760e-1261.70RING-type domain-containing protein n=1 Tax=Zizani... [more]
UPI001F5D7E2B6.280e-1243.82E3 ubiquitin-protein ligase EL5-like n=1 Tax=Loliu... [more]
A0A1S3UJJ9_VIGRR1.160e-1148.28RING-type E3 ubiquitin transferase n=1 Tax=Vigna r... [more]
A0A836C7Z7_9STRA2.120e-1158.70RING-type domain-containing protein n=1 Tax=Tribon... [more]
A0A3B6KBX6_WHEAT3.910e-1143.94RING-type domain-containing protein n=1 Tax=Tritic... [more]
UPI001F5CDF933.910e-1145.76E3 ubiquitin-protein ligase EL5-like n=2 Tax=Loliu... [more]
A0A835EKD1_9POAL4.790e-1150.00RING-type domain-containing protein n=2 Tax=Digita... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 138..179
e-value: 1.7E-4
score: 30.9
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 136..180
e-value: 5.9E-11
score: 42.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 138..180
score: 10.306
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 99..186
e-value: 6.8E-18
score: 66.1
NoneNo IPR availablePANTHERPTHR45768FAMILY NOT NAMEDcoord: 4..415
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..472
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 134..185
NoneNo IPR availableTMHMMTMhelixcoord: 2..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig132contigF-serratus_M_contig132:456901..460652 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig132.2391.1mRNA_F-serratus_M_contig132.2391.1Fucus serratus malemRNAF-serratus_M_contig132 439632..461510 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig132.2391.1 ID=prot_F-serratus_M_contig132.2391.1|Name=mRNA_F-serratus_M_contig132.2391.1|organism=Fucus serratus male|type=polypeptide|length=473bp
MNLVVIVAIVVGCGVLTLVILCIVRKIMDLCLMRFDPTGSISYSQEEGLP
KATIERLPQTRYRKPPPKVQVKAAKIGAKHDGPASIGAAAVIGDVSSVSV
TEAGEERGSTNSVPVVAAAAAGAEESAADGRDSTEDMCAICLIEYEHGDD
LRIIPGCKHHFHKECIDPWLETKAVCAYCKATVEARKSCCERAMRSASDR
FGIRLVAPTTVRFSSSRRTYTNRDVHDATGPSLPSSYGQSDVDYVGSMVG
TMVDSHRGGNTADEEAGEASGGRAAGARLGVGSRSESATRIPSARGGIAA
GGEGQQDEPQGAIVVQPVAGSSFLVVPREFSGGAGGVGSGVGSRSSSVDM
SMSSESMAAAAAAAAASRIAPASGMVVADGGGEGEEKGGDGGDPQARTAG
GANVGAGRSRSRGRRSSSRGGSRRAGGGVRDGLGGVVFGGNTQEFKEAEA
EDRARQEAGTGTGPNNLRQVTL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD