prot_F-serratus_M_contig132.2380.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig132.2380.1
Unique Nameprot_F-serratus_M_contig132.2380.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length604
Homology
BLAST of mRNA_F-serratus_M_contig132.2380.1 vs. uniprot
Match: D8LEW8_ECTSI (CDT1 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEW8_ECTSI)

HSP 1 Score: 353 bits (906), Expect = 1.670e-110
Identity = 209/416 (50.24%), Postives = 262/416 (62.98%), Query Frame = 0
Query:  220 PLETMFQSLEQVLLLFRRRKQTACFRQVKAGVEAMCGRSFTTHHLAQILFVQPDAYKVSSKTDSRPIRGGYRLRDLLIEFGEAEDPVEASSRSRKSGSIEHER-------RVGGKTGNEKEC--GASFGGPGGTGIESVSSQRRDKFRRMLLAASARHCTCAADRE----RQSTFCECSCLPGAPLPDTSPLRGEG------------NPCLSPS---------GIRLSAGTKALSHIRGLLESGGVTRDVG------ESEGSDAPKNLDALRKQLRHKDMLSALERNKTEEEREDDRRRRGNLPALADAVRSFIAHSRRNTCCLDTLVEALSSSSRQALSVREARERLRMLADVVPEWCSIIAPPDSRKVGGGRDGGVDDGMVGRPIKAKEVVRVNTMIHYAEVRQMIVFMAGGG 595
            PLE MF +LEQVL LFRRR+Q    +Q+K  VE MCGRSFT  HLA+I FVQPDAYK+SS+TD+RP RGGYRL+D+ IE G +  P + +     +     +R         G   G +++   G   GG    G E++S++RR+ F R+L +A ARHC C   R       +   ECSCLP APLPDT PLR +G                SPS         G   S G    + + G    G V   +G      + EGSDAPKN++ALR++LR KD LSA ERNKTEEE+E DRRR+GNLPA+ADAVRS+ AH+ R TC LD L+EALSSSS+ ALS +EAR+R+RMLA +VPEWC+IIAP   R    G  GG+D G+V RP+K K+VVRVNT I + EVRQMI FM+GGG
Sbjct:  203 PLEAMFLALEQVLALFRRRRQATLLKQIKPAVEGMCGRSFTRQHLARIAFVQPDAYKLSSRTDARPTRGGYRLKDIFIETGPSPPPADEACLDDDTQGARRDRVGKAPAAGKGAVAGADRDGRNGGDTGGHSIAGGEALSARRREIFLRLLASAKARHCKCGGSRGIAGGPSAPRDECSCLPQAPLPDTRPLRADGIGGGSRAAPDAGGAVESPSTSQGLERSPGDGRSGGGGGGNLLPGTFRGGCVASGMGGGRVDYDEEGSDAPKNVEALRERLRQKDALSAKERNKTEEEKEADRRRKGNLPAMADAVRSYFAHAGRTTCSLDVLIEALSSSSKHALSHKEARDRVRMLASIVPEWCTIIAP---RAPSAGGGGGIDGGLVARPMKGKDVVRVNTRIRFDEVRQMIAFMSGGG 615          
BLAST of mRNA_F-serratus_M_contig132.2380.1 vs. uniprot
Match: A0A6H5K955_9PHAE (CDT1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K955_9PHAE)

HSP 1 Score: 340 bits (871), Expect = 6.010e-108
Identity = 206/428 (48.13%), Postives = 254/428 (59.35%), Query Frame = 0
Query:  224 MFQSLEQVLLLFRRRKQTACFRQVKAGVEAMCGRSFTTHHLAQILFVQPDAYKVSSKTDSRPIRGGYRLRDLLIEFGEAEDPVEASSRSRKSGSIEHERRVGGKTGNEKECGASFGGPGGT----------------GIESVSSQRRDKFRRMLLAASARHCTCAADR----ERQSTFCECSCLPGAPLPDTSPLRGEGNPCLSPSGIRLSAGTKALSHIRGLLESGGVTRDVGES--------------------------------------EGSDAPKNLDALRKQLRHKDMLSALERNKTEEEREDDRRRRGNLPALADAVRSFIAHSRRNTCCLDTLVEALSSSSRQALSVREARERLRMLADVVPEWCSIIAPPDSRKVGGGRDGGVDDGMVGRPIKAKEVVRVNTMIHYAEVRQMIVFMAG 593
            MF +LEQVL LFRRR+Q    +Q+K  VE MCGRSFT  HLAQI FVQPDAYK+SSKTD+RP RGGYRLRD+ IE G +  P + +     +     +R VG      K   A  G   G                 G E++S++RR  F R+L +A ARHC C        E  +   ECSCLP APLPDT PLR +G          +S G++A +H  G  ES   ++ +  S                                      EG DAPKNL+ALR++LR KD LSA ERNKT EE+E DRRR+GNLPA+ADAVRS+ AH+ R TC LD L+EALSSSS+ ALS +EAR+R+RMLA +VPEWC+IIAPP     GGG   G+D G+V RP+K K+VVRVNT I + EVRQMI FM+G
Sbjct:    1 MFLALEQVLTLFRRRRQATLLKQIKPAVEGMCGRSFTRQHLAQIAFVQPDAYKLSSKTDARPTRGGYRLRDIFIETGPSPPPADEACLDDDTQGARRDR-VG------KAPAAGKGAVAGADXXXXXXXXXXXRSNAGGEALSARRRGIFLRLLASARARHCKCGGSEGITNEPSAPRDECSCLPQAPLPDTRPLRADG----------ISGGSRAAAHAGGAAESPSTSQGLERSPVDGRCGGGGIGGNLLPGTSRGGCVASGMSGGRVDYDEEGPDAPKNLEALRERLRQKDALSAKERNKTAEEKEADRRRKGNLPAMADAVRSYFAHAGRTTCSLDVLMEALSSSSKHALSRKEARDRVRMLASIVPEWCTIIAPPAPLAGGGG---GIDGGLVARPMKGKDVVRVNTRIRFDEVRQMIAFMSG 408          
BLAST of mRNA_F-serratus_M_contig132.2380.1 vs. uniprot
Match: A0A433PE86_9FUNG (CDT1 domain-containing protein n=1 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PE86_9FUNG)

HSP 1 Score: 63.2 bits (152), Expect = 1.140e-6
Identity = 100/399 (25.06%), Postives = 160/399 (40.10%), Query Frame = 0
Query:  221 LETMFQSLEQVLLLFRRRKQTACFRQVKAGVEAMCGRSFTTHHLAQILFVQPDAYKVSSKTDSRPIRGGYR---LRDLLIEFG----EAEDPVEASSRSRKSGSIEHERRVGGKTGNEKECGASFGGPGGTGIESVSSQRRD----KFRRMLLAASARHCTCAAD---RERQSTFCECSCLPG---APLPDTSPLRGEGNPCL---SPSGIRLSAGTKALSHIRGLLESGGVTRDVGESEGSDAPKNLDALRKQLRHKDMLSAL-------ERNKTEE-------EREDDRRRRGNLPALADAVRSFIAHSRRNTCCLDTLVEALSSSSRQALSVREARERLRMLADVVPEWCSIIAPPDSRKVGGGRDGGVDDGMVGRPIKAKEVVRVNTMIHYAEVR 585
            LE + ++L+  ++  + + +   F ++K  VE +  R+F   HLAQI  V PDAY   +      ++  Y+   +  + IEFG    E   P   SS SR   S      V   +  + E          +  E++ S+  D    +  + L     R      D   R     F     +P    APLP  +  R   NP     S  G         L+     LE   V++    SE +   +  DA  K    K  +SAL       E+ KTEE       E+   R     LP + D++    + +++N   L  + + +S S +  LS  EA E LR+L ++VP+WC + +              VD+GM+ +  K+K +  V   I  A V+
Sbjct:  374 LEKISRALDHAMVFMKGQNRQCVFHKIKKSVEIISKRTFEMRHLAQIKTVAPDAYTFEA------VQVQYQNSCVDSISIEFGILGVETNVPAVLSSPSRSRPSERSANSVPLLSSKQLE----------SRHEAIKSRLLDLVKTEHEKFLATLPLRPEPSTPDVRLRHWHPRF-NLETVPSVAQAPLPQVA--RNVVNPAALLKSKEGGLPPTFRAVLAKAAAKLEENKVSKPA--SEPTKVEQKGDAPAKPATGKSSMSALLERIRAKEKKKTEETMYGESPEKTQRRTMMSRLPDIVDSISFVFSSAKKNVMYLRDVGKKVSESYKIPLSEAEAEEHLRLLTEIVPDWCRLSS--------------VDNGMLLKIEKSKTLGEVKARIREALVK 737          
BLAST of mRNA_F-serratus_M_contig132.2380.1 vs. uniprot
Match: A0A507CBU7_9FUNG (CDT1 domain-containing protein n=1 Tax=Synchytrium microbalum TaxID=1806994 RepID=A0A507CBU7_9FUNG)

HSP 1 Score: 58.2 bits (139), Expect = 4.670e-5
Identity = 86/353 (24.36%), Postives = 132/353 (37.39%), Query Frame = 0
Query:  221 LETMFQSLEQVLLLFRRRKQTACFRQVKAGVEAMCGRSFTTHHLAQILFVQPDAYKVSSKTDSRPIRGGYRLRDLLIEFGEAEDPVEASSRSRKSGSIEHERRVGGKTGNEKECGASFGGPGGTGIESVSSQRRDKFR-RMLLAASARHCTCAADRERQSTF-----------CECSCLPGAP---LPDTSPLR-------------GEGNPCLSPSGIRLSAGTKALSHIRGLLESGGVTRDVGESEGSDAPKNLDALRKQLRHKDMLSALERNKTEEEREDDRRRRGNLPALADAVRSFIA---HSRRNTCCLDTLVEALSSSSRQALSVREARERLRMLADVVPEWCSII 542
            LE +F +LE  ++  + R Q+A F +VK  VE    R+F   HLAQI+ V P+AY +   T  R +  G R+  L IEF        A+    K  S+  E                          +V   RR+ F  R+L      H       + +  +            E   +P  P   LP   P                       P  ++    T   S           T        + A   L+ +R++ R K   S      T EE     +RR  L  L D ++  +     SR+N   L T+ + +++  +  LS  EARE L++LA+V+PE+C +I
Sbjct:  237 LEQIFHALEHTVMFVKSRDQSATFHRVKKPVENTANRTFELSHLAQIVTVYPEAYTM---TPVRIMDKGIRVESLAIEFAR-----NATGADIKKASLVAE-------------------------SNVWLPRRETFHDRLLDRVKTEHAKMLQKLKFKLKYDPMQVSAWHPRFELESVPDIPEAVLPAFPPREVMTLEALLEARKASTNGKLKEPEKVKPIVPTPQPSXXXXXXXXX-XTPTPSTKPQTKASAMLERIREKERLKLEASLFSHIPTPEET----KRRVRLSRLEDVIQCLLVLYVSSRKNVLPLSTVSQHVANGHKAQLSESEAREHLKVLAEVLPEFCKLI 551          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig132.2380.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LEW8_ECTSI1.670e-11050.24CDT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5K955_9PHAE6.010e-10848.13CDT1 domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A433PE86_9FUNG1.140e-625.06CDT1 domain-containing protein n=1 Tax=Endogone sp... [more]
A0A507CBU7_9FUNG4.670e-524.36CDT1 domain-containing protein n=1 Tax=Synchytrium... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014939CDT1 Geminin-binding domain-likeSMARTSM01075CDT1_2coord: 214..394
e-value: 1.3E-4
score: 22.7
IPR014939CDT1 Geminin-binding domain-likePFAMPF08839CDT1coord: 221..293
e-value: 3.6E-15
score: 56.7
NoneNo IPR availableGENE3D1.10.10.1420coord: 442..546
e-value: 3.0E-12
score: 48.4
NoneNo IPR availablePANTHERPTHR28637:SF1DNA REPLICATION FACTOR CDT1coord: 451..544
NoneNo IPR availablePANTHERPTHR28637FAMILY NOT NAMEDcoord: 221..394
NoneNo IPR availablePANTHERPTHR28637:SF1DNA REPLICATION FACTOR CDT1coord: 221..394
NoneNo IPR availablePANTHERPTHR28637FAMILY NOT NAMEDcoord: 451..544
IPR032054DNA replication factor Cdt1, C-terminalPFAMPF16679CDT1_Ccoord: 451..542
e-value: 3.8E-13
score: 49.7
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 220..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig132contigF-serratus_M_contig132:182272..196207 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig132.2380.1mRNA_F-serratus_M_contig132.2380.1Fucus serratus malemRNAF-serratus_M_contig132 181752..196241 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig132.2380.1 ID=prot_F-serratus_M_contig132.2380.1|Name=mRNA_F-serratus_M_contig132.2380.1|organism=Fucus serratus male|type=polypeptide|length=604bp
MKRRLASSRTKDSVQKANRKSTRGSRLAAAAEGVSHEKTIPRIQIESAKS
TAAPGTEHPPQGATFRKMPVGTRQAVSCTPKDQSSTCRKQLRLSETSLQG
KGEGGRRSRCGSSVSPTAEVGKPSAAPMTPGRRSPRATRFRECKSARSKA
VEGKDSGKMDVSGYEETIPANLLFPATQPQGQVDPAIRSAQQADGETTNH
PVLLEECGKVDTDIDSQENPLETMFQSLEQVLLLFRRRKQTACFRQVKAG
VEAMCGRSFTTHHLAQILFVQPDAYKVSSKTDSRPIRGGYRLRDLLIEFG
EAEDPVEASSRSRKSGSIEHERRVGGKTGNEKECGASFGGPGGTGIESVS
SQRRDKFRRMLLAASARHCTCAADRERQSTFCECSCLPGAPLPDTSPLRG
EGNPCLSPSGIRLSAGTKALSHIRGLLESGGVTRDVGESEGSDAPKNLDA
LRKQLRHKDMLSALERNKTEEEREDDRRRRGNLPALADAVRSFIAHSRRN
TCCLDTLVEALSSSSRQALSVREARERLRMLADVVPEWCSIIAPPDSRKV
GGGRDGGVDDGMVGRPIKAKEVVRVNTMIHYAEVRQMIVFMAGGGDGDRV
RRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014939CDT1_Gemini-bd-like
IPR032054Cdt1_C
IPR036390WH_DNA-bd_sf