prot_F-serratus_M_contig132.2378.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig132.2378.1
Unique Nameprot_F-serratus_M_contig132.2378.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length236
Homology
BLAST of mRNA_F-serratus_M_contig132.2378.1 vs. uniprot
Match: D8LEX3_ECTSI (PRA1 family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEX3_ECTSI)

HSP 1 Score: 266 bits (680), Expect = 4.120e-87
Identity = 142/232 (61.21%), Postives = 173/232 (74.57%), Query Frame = 0
Query:    4 EAELRRRPISSGRRRASAPRANVVEERRNSKDVISAVLSQLGVQLEAFINELSRLREMKPWGDFFAHFKAPRAWNTSILDERLTTNFLHYRGNYSVIAAGLFLMGIISHPSVLVALLSCALLVTFLFPAGEHPRIVRLGGRILESSERIAAGVFGVACILGLTGAWYTLLFYGGLALFVCTVHALFRPTTISSKARRAAADAHVAASGFTIESAQNFVEGILGMNRFNTRSQ 235
            E +LRRRP+ SG R ++ PR NV  +   ++ V  AVLS+LG  +E F   L RL+EMK WG+FFA FKAPRAWNT +LDERLTTNFLHYRGNYSV+AAGL ++GIIS+P VL+ALL CALL+TFLFP GE  R VR+G R LE  ER+AA V G +CILGLTGAWY LLFYGG  + +C +H +FRP +I SK  RAAA+A    +GFTIE+AQNF E I G+    +RSQ
Sbjct:    3 EPQLRRRPVGSGSRGSAPPRPNVANQ---NQAVALAVLSELGAMMELFFKGL-RLKEMKGWGEFFARFKAPRAWNTKVLDERLTTNFLHYRGNYSVVAAGLLVVGIISNPYVLLALLCCALLLTFLFPTGEPRRAVRVGDRTLERQERLAAAVIGASCILGLTGAWYILLFYGGAGVLLCLLHGVFRPRSIGSKTSRAAAEAQ---AGFTIENAQNFAENIFGIT--GSRSQ 225          
BLAST of mRNA_F-serratus_M_contig132.2378.1 vs. uniprot
Match: A0A835Z7M0_9STRA (PRA1 family protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7M0_9STRA)

HSP 1 Score: 128 bits (321), Expect = 7.620e-33
Identity = 67/156 (42.95%), Postives = 92/156 (58.97%), Query Frame = 0
Query:   47 QLEAFINELSRL--REMKPWGDFFAHFKAPRAWNTSILDERLTTNFLHYRGNYSVIAAGLFLMGIISHPSVLVALLSCALLVTFLFPAGEHPRIVRLGGRILESSERIAAGVFGVACILGLTGAWYTLLFYGGLALFVCTVHALFRPTTISSKARR 200
            +L++  +EL  L  R M+PWG+FF  FK PRAW   +LDER+TTN LHYRGNY  +  G  L+ I+S P++L+   +   L+ FLFP     R V + GR + + ER    +  +  +L  TGA  TLL+  GLA   C  HA+FRP  + SK  R
Sbjct:   31 ELQSIASELQSLSWRNMRPWGEFFEQFKPPRAWTKEVLDERITTNMLHYRGNYCFVVFGSILVFIVSSPALLLVAAASLALLVFLFPTETSGRAVVVSGRAVSAPERRFIAIVLILTLLATTGAAATLLYASGLAAATCLAHAVFRPRNLKSKFNR 186          
BLAST of mRNA_F-serratus_M_contig132.2378.1 vs. uniprot
Match: A0A7S2UXU1_9STRA (PRA1 family protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXU1_9STRA)

HSP 1 Score: 100 bits (250), Expect = 8.760e-23
Identity = 54/150 (36.00%), Postives = 81/150 (54.00%), Query Frame = 0
Query:   58 LREMKPWGDFFAHFKAPRAWNTSILDERLTTNFLHYRGNYSVIAAGLFLMGIISHPSVLVALLSCALLVTFLFPAGEHPRIVRLGGRILESSERIAAGVFGVACILGLTGAWYTLLFYGGLALFVCTVHALFRPTTISSKARRAAADAHV 207
            L+ M+PWG+FFA FK P+ W+ + L++R+ TN+LHYRGNY  +   + L+ ++  P + + L  C     F+  A    R VR+G R+L  +E +     G   +L  +G  Y LL    L   VC  H + RP T+ SK  R   +A V
Sbjct:   25 LKSMQPWGEFFARFKPPKRWDQTSLEQRINTNYLHYRGNYLFVMVAVTLLHVVLAPVMALVLAVCVC--GFILLAPPSGREVRVGQRLLSRNEGLVLASIGSLALLLWSGTLYRLLMVLSLGFAVCVAHMVLRPRTLGSKTNRFMEEAKV 172          
BLAST of mRNA_F-serratus_M_contig132.2378.1 vs. uniprot
Match: A0A7S2SJN4_9STRA (PRA1 family protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SJN4_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.240e-16
Identity = 51/162 (31.48%), Postives = 83/162 (51.23%), Query Frame = 0
Query:   41 LSQLGVQLEAFINELSRL--REMKPWGDFFAHFKAPRAWNTSILDERLTTNFLHYRGNYSVIAAGLFLMGIISHPSVLVALLSCALLVTFLFPAGEHPRIVRLGGRILESSERIAAGVFGVACILGLTGAWYTLLFYGGLALFVCTVHALFRPTTISSKARR 200
            + +LG  L+    +L  L   E++PWG+FF+HFK P+ W    +++R+ TNFLHYR NY ++   + L    S P +L+ +    LL  +L    + P ++  G R  E  + I  G   +  +L + G    LL    LA+ +  +H +FR   + SK  R
Sbjct:   33 VEELGEGLQVLRQQLQALGLNEVRPWGEFFSHFKPPKQWTQDEVEKRVVTNFLHYRTNYLLVLGTILLAMFFSSPMLLITICLVVLLWVYLMLVKKGPLLIE-GRRFDEGQKAIGCGCASILILL-MAGQLIKLLGTLSLAVILICLHMVFRQRNLKSKFNR 192          
BLAST of mRNA_F-serratus_M_contig132.2378.1 vs. uniprot
Match: A0A482SWI0_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SWI0_9ARCH)

HSP 1 Score: 84.0 bits (206), Expect = 5.170e-16
Identity = 54/175 (30.86%), Postives = 98/175 (56.00%), Query Frame = 0
Query:   59 REMKPWGDFFAHFKAPRAWNTSILDERLTTNFLHYRGNYSVIAAGLFLMGIISHPSVLVALLSCALLVTFLFPAGEHPRIVRLGGRILESSERIAAGVFGVACILGLTGAWYTLLFYGGLALFVCTVHALFRPTTISSKARRAAADAHVAASGFTIESAQNFVEGILGMNRFNTR 233
            +EMKPW +FFA FK P+ +++  L++R+TTNFLHYR NY  I+ G+ ++ I+++P ++++ ++   + T++      P I+          + + AG+  +  IL  TG    L +     + VC +H L RP ++SSKA R   +  +   G+++ S  + +E  L   R N++
Sbjct:   31 KEMKPWSEFFATFKPPQ-FDSRHLEQRITTNFLHYRSNYLAISLGILILQILTNPVIILSSVAIFGICTYVLQVHRKPFIIGDFSFDGVGKQYLCAGLSAI--ILFATGTVVKLCWCLFYIILVCGIHMLLRPRSVSSKANRMYEEMKL--KGYSVFSVPS-LESKLSEERINSK 199          
BLAST of mRNA_F-serratus_M_contig132.2378.1 vs. uniprot
Match: A0A7S1TSJ8_9STRA (PRA1 family protein n=5 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TSJ8_9STRA)

HSP 1 Score: 66.6 bits (161), Expect = 8.440e-10
Identity = 51/160 (31.87%), Postives = 85/160 (53.12%), Query Frame = 0
Query:   41 LSQLGVQLEAFINELSRLREMKPWGDFFAHFKAPRAWNTSILDERLTTNFLHYRGNYSVIAAGLFLMGIISHPSVLVALLSCALLVTFLFPAGEHPRIVRLGGRILESSERIAAGVFGVACIL--GLTGAWYTLLFYGGLALFVCTVHALFRPTTISSKA 198
            L +  VQL+A       +RE  PWG+F      P+ +N +++ +R+T NFL++RGNY   AA + L+ ++  P+ +  L+  AL +  L      P +V+  G  L+   R  A +FGVA  L   +TGA  TLL    +A  + T H + +  + +++A
Sbjct:   19 LREGAVQLKAI-----GIREPAPWGEFLDDLAVPQDFNAAVVKQRITQNFLYFRGNYMACAAVVVLLFVLMSPTTIFVLVLAALGLVALQATRNSPIVVQ--GTNLDFKTR--AILFGVATFLLAVITGALGTLLLSLSVAGTLATAHMVCKSPSAAARA 169          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig132.2378.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D8LEX3_ECTSI4.120e-8761.21PRA1 family protein n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A835Z7M0_9STRA7.620e-3342.95PRA1 family protein n=1 Tax=Tribonema minus TaxID=... [more]
A0A7S2UXU1_9STRA8.760e-2336.00PRA1 family protein n=2 Tax=Fibrocapsa japonica Ta... [more]
A0A7S2SJN4_9STRA3.240e-1631.48PRA1 family protein n=1 Tax=Rhizochromulina marina... [more]
A0A482SWI0_9ARCH5.170e-1630.86Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S1TSJ8_9STRA8.440e-1031.88PRA1 family protein n=5 Tax=Phaeomonas parva TaxID... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 41..61
NoneNo IPR availablePANTHERPTHR19317:SF0PRENYLATED RAB ACCEPTOR PROTEIN 1coord: 40..195
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..166
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..96
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 131..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 97..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 172..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 190..235
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 167..171
NoneNo IPR availableTMHMMTMhelixcoord: 167..189
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
IPR004895Prenylated rab acceptor PRA1PFAMPF03208PRA1coord: 57..197
e-value: 1.3E-26
score: 93.0
IPR004895Prenylated rab acceptor PRA1PANTHERPTHR19317PRENYLATED RAB ACCEPTOR 1-RELATEDcoord: 40..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig132contigF-serratus_M_contig132:166188..175720 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig132.2378.1mRNA_F-serratus_M_contig132.2378.1Fucus serratus malemRNAF-serratus_M_contig132 166188..175720 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig132.2378.1 ID=prot_F-serratus_M_contig132.2378.1|Name=mRNA_F-serratus_M_contig132.2378.1|organism=Fucus serratus male|type=polypeptide|length=236bp
MTNEAELRRRPISSGRRRASAPRANVVEERRNSKDVISAVLSQLGVQLEA
FINELSRLREMKPWGDFFAHFKAPRAWNTSILDERLTTNFLHYRGNYSVI
AAGLFLMGIISHPSVLVALLSCALLVTFLFPAGEHPRIVRLGGRILESSE
RIAAGVFGVACILGLTGAWYTLLFYGGLALFVCTVHALFRPTTISSKARR
AAADAHVAASGFTIESAQNFVEGILGMNRFNTRSQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004895Prenylated_rab_accept_PRA1