prot_F-serratus_M_contig132.2372.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_F-serratus_M_contig132.2372.1
Unique Name	prot_F-serratus_M_contig132.2372.1
Type	polypeptide
Organism	Fucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length	728

Homology

[Close]

BLAST of mRNA_F-serratus_M_contig132.2372.1 vs. uniprot
Match: A0A6H5JQS7_9PHAE (VHS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQS7_9PHAE)

HSP 1 Score: 211 bits (538), Expect = 5.680e-54
Identity = 197/476 (41.39%), Postives = 230/476 (48.32%), Query Frame = 0

Query:    1 MLESGDDGYDEEAELAKAIRESSLGVT-----GNGSQGGGARGPGDLAAAAEDGDLLSMVPPTIEALMDIMESSRDLTELLDNDAAPDVVDQTRGLVEQVIKKVEELEREDNPDEKDMDRYLKAHDDLQTVLRVYEGVLDGKNTLPLSNNLADVATGGARGPLGNGRYLDSSDEESLVAREVTRRAATAV--------------VGQRSGEQSEGRGDDSGGRLSPATGNLLDLDLEESAPMEAGVGGRASAGGSMLVAYNAGQFNA---NNARGASG-SAAGFDSSSSAALGSTTXXXXXXXX--GAVFGSNP---------------AGSSYGGGGDSGAGFAPSDLFAPF--GSAPGSEAPQAPE-------------------PSQSNASIISVKRSSSRGPKR-----ASSSQDLS-DFGSWMSSVQGTGLGADPFAPSP-AAGYANG--------RLPVVRESPSFASNN 400
            +L  GD+ YDEEA+LA AI  SS+  T              R        AE+G+LLSMVPPTIEALMDIME S+DLTELL N+ APDVVDQTR LV+QVIKKVE+L +  NPDEKD+DRYLKAHDDLQTVLRVYEGV+DG  TLPLS        GG     G                       TA                                GR SPA GNLLDL  EE+ P++  + G  + G  M+VAY  GQF A   N+  G SG    GFDS S A  GS T          GAV+GSN                   S GGGGD  +GFAP D FA    GSAP + AP  P                    P   ++SI+SV  SS+    +     A   Q LS DFGSWMSS  G             +AG+ANG        +L  + ESPS AS+N
Sbjct:  211 VLRPGDESYDEEADLAAAIFASSISGTVXXXXXXXXXXXXXRAVNSGLPTAENGELLSMVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGQSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLSRR------GGXXXTRGTXXXXXXXXXXXXXXXXXXXXXXTAYSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRSSPARGNLLDL--EENTPLDTSMTGEGAGG--MMVAYTDGQFMASTSNSVGGVSGVGGVGFDSLSGAGQGSATASNYASASDTGAVYGSNQFXXXXXXXXXXXXXXXXXSGGGGGDFSSGFAPRDPFAAAFGGSAPSAAAPDVPPGAPDEPAPRPLPAFFPGGIPGNQSSSIVSVTSSSATNRNQGVLGVAQQRQSLSTDFGSWMSSRGGPXXXXXXXXXXXXSAGFANGLLGGPGRHKLYSLHESPSLASSN 676

[Close]

BLAST of mRNA_F-serratus_M_contig132.2372.1 vs. uniprot
Match: D8LEH3_ECTSI (VHS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEH3_ECTSI)

HSP 1 Score: 167 bits (422), Expect = 3.560e-41
Identity = 96/147 (65.31%), Postives = 109/147 (74.15%), Query Frame = 0

Query:    1 MLESGDDGYDEEAELAKAIRESSLGVTGNGSQGGGARGPGDLAAA----AEDGDLLSMVPPTIEALMDIMESSRDLTELLDNDAAPDVVDQTRGLVEQVIKKVEELEREDNPDEKDMDRYLKAHDDLQTVLRVYEGVLDGKNTLPLS 143
            +L  GD+GYDEEA+LA AI  SS+  T                 +    AE+G+LLSMVPPTIEALMDIME S+DLTELL N+ APDVVDQTR LV+QVIKKVE+L    NPDEKD+DRYLKAHDDLQTVLRVYEGV+DG  TLPLS
Sbjct:  207 VLRPGDEGYDEEADLAAAIFASSISGTXXXXXXXXXXXXXXAVNSGLPTAENGELLSMVPPTIEALMDIMEGSKDLTELLGNEVAPDVVDQTRDLVQQVIKKVEDLGHSGNPDEKDLDRYLKAHDDLQTVLRVYEGVVDGSETLPLS 353

The following BLAST results are available for this feature:

BLAST of mRNA_F-serratus_M_contig132.2372.1 vs. uniprot

BLAST of mRNA_F-serratus_M_contig132.2372.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JQS7_9PHAE	5.680e-54	41.39	VHS domain-containing protein n=1 Tax=Ectocarpus s...	[more]
D8LEH3_ECTSI	3.560e-41	65.31	VHS domain-containing protein n=1 Tax=Ectocarpus s...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 85..105
None	No IPR available	SUPERFAMILY	89009	GAT-like domain	coord: 52..136

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
F-serratus_M_contig132	contig	F-serratus_M_contig132:31270..34953 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Fucus serratus MALE	2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90	2022-09-16
OGS1.0 of Fucus serratus male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_F-serratus_M_contig132.2372.1	mRNA_F-serratus_M_contig132.2372.1	Fucus serratus male	mRNA	F-serratus_M_contig132 30764..55883 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_F-serratus_M_contig132.2372.1 ID=prot_F-serratus_M_contig132.2372.1|Name=mRNA_F-serratus_M_contig132.2372.1|organism=Fucus serratus male|type=polypeptide|length=728bp
MLESGDDGYDEEAELAKAIRESSLGVTGNGSQGGGARGPGDLAAAAEDGD
LLSMVPPTIEALMDIMESSRDLTELLDNDAAPDVVDQTRGLVEQVIKKVE
ELEREDNPDEKDMDRYLKAHDDLQTVLRVYEGVLDGKNTLPLSNNLADVA
TGGARGPLGNGRYLDSSDEESLVAREVTRRAATAVVGQRSGEQSEGRGDD
SGGRLSPATGNLLDLDLEESAPMEAGVGGRASAGGSMLVAYNAGQFNANN
ARGASGSAAGFDSSSSAALGSTTASNFPSETGAVFGSNPAGSSYGGGGDS
GAGFAPSDLFAPFGSAPGSEAPQAPEPSQSNASIISVKRSSSRGPKRASS
SQDLSDFGSWMSSVQGTGLGADPFAPSPAAGYANGRLPVVRESPSFASNN
GGGGGSNPFGPSQPSTATSGGFPSQERQPAPGTGAGADTTPSTDVSDLFS
FTSSASGGGGVSGGDWTGGRSTKGGFPLQGASMSASGSTAFSDFSRAGPQ
QPVPLAPPMQQPLPQQQHQSATFWQAQQDPQQQRQQQQQRADPFAGTSIV
PADVGSGRGGSGGNPTPFTTDRNDPFTQLTVASTGAGAGGGHSASGSGNG
GSFSQALVLHGGGDGGVSGGGGRDATKFNPFDDQSGVTTTFVPQQQGQQQ
RQQQQQQQPNRFPHPGQGHRQQSQRWQQMQQPQQAPQAPFQQAPQLQSYG
QGYQPQQQLPPPQQQQRPQQPPDHHFV*