prot_F-serratus_M_contig1318.2362.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1318.2362.1
Unique Nameprot_F-serratus_M_contig1318.2362.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length268
Homology
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BLAST of mRNA_F-serratus_M_contig1318.2362.1 vs. uniprot
Match: D8LSJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSJ7_ECTSI)

HSP 1 Score: 219 bits (558), Expect = 1.710e-67
Identity = 145/253 (57.31%), Postives = 163/253 (64.43%), Query Frame = 0 
Query:   18 ATTAVAVAGSLWWRKEKKGARKS-------ARKPPASSPGIRVAKIQDS--SGGSSSARGWGSLIGGSASSSQGRASKWEQSKKKGDLGYYFAHHTALKELAPEDYQMNGPRLLRKGGAPAXXXXXXXXXXXXXXXXXXXXXXXXRAQQITSYSWEDYGEEVRLTFRQSGWQWGKVEEEEIGIEWGTRRFRMSIDSREYGTHTIDLQNLAGEVGDVRVLKMKNRLSVTLVKGGR-GSHSKRAPWEKLQAPPEK 260
            A  A   A  LWW +     R S       ++KP A +PGIR   +QDS   G +           G        +SKWEQSK+KGDLGYYFAHH  +KELAPEDYQMNGP+LL KG   +          XXXXXXXXXXXXXX  QQI+SYSWEDYGEEVRLTFRQS W+W KV+ EEI IEWG+RRFRMSIDSREYG HTIDLQ L+G V  V   K+K RL V LVKGGR GS+S    W KLQA  EK
Sbjct:   16 ALAAALAALLLWWFRGMSEGRSSGGAGTSGSKKPLAHTPGIRAVCMQDSFTEGSNGGGXXXXXXXTGQGDRRAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSKGDTTSAPNGARPNGSXXXXXXXXXXXXXX-PQQISSYSWEDYGEEVRLTFRQSEWEWAKVDVEEIEIEWGSRRFRMSIDSREYGLHTIDLQRLSGVVAGVTARKLKTRLVVALVKGGRRGSYSHSPAWSKLQAALEK 267
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BLAST of mRNA_F-serratus_M_contig1318.2362.1 vs. uniprot
Match: A0A835Z330_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z330_9STRA)

HSP 1 Score: 104 bits (259), Expect = 5.320e-23
Identity = 79/235 (33.62%), Postives = 110/235 (46.81%), Query Frame = 0 
Query:   29 WWRK---EKKGARKSARKPPASSPGIRVAKIQDSSGGSSSARGWGSLIGGSASSSQGRASKWEQSKKKGDLGYYFAHHTALKE--LAPEDYQMNGPRLLRKGGAPAXXXXXXXXXXXXXXXXXXXXXXXXRAQQITSYSWEDYGEEVRLTFRQSGWQWGKVEEEEIGIEWGTRRFRMSIDSREYGTHTIDLQNLAGEVGDVRVLKMKNRLSVTLVKGGRGSHSKRAPWEKLQAPP 258
            WW     E  G  K       S+PG+ VAK + + GGS+ A    S   G+     GR   WE+SK K +LGYY AHH+ L +  +A  +++MN P+ L      A                           +ITSY++ED   EVRL FRQ GW W +V  +E+  +W  R  R++I+S +YG H     +L GE+  V V KMK  +   L+K   G+      W  LQ  P
Sbjct:   44 WWESKSVEGIGVPKPKTPVATSTPGVSVAK-KPAQGGSAKASPERSAAAGTG---DGRT-PWERSKAKSELGYYQAHHSKLPDDGIASHEFEMNRPKPLGTRIVTARPPT-----------------------KITSYTYEDTFHEVRLDFRQEGWDWSQVPAQELSADWNGRSARLTINSTKYGAHVAAFTDLYGELAGVAVRKMKRSVRFVLMKKAPGA------WPALQGSP 244
[Close]
BLAST of mRNA_F-serratus_M_contig1318.2362.1 vs. uniprot
Match: A0A6H5L1W9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L1W9_9PHAE)

HSP 1 Score: 97.4 bits (241), Expect = 1.210e-21
Identity = 60/119 (50.42%), Postives = 70/119 (58.82%), Query Frame = 0 
Query:   18 ATTAVAVAGSLWWRKEKKGARKS-------ARKPPASSPGIRVAKIQDSSGGSSSARGWGSLIGGSASSSQG-----RASKWEQSKKKGDLGYYFAHHTALKELAPEDYQMNGPRLLRK 124
            A  A   A  LWW       R S       ++KP A +PGIR   +QDS    S   GWGS     +S+ QG      +SKWEQSK+KGDLGYYFAHH  +KELAPEDYQMNGP+LL K
Sbjct:   16 ALAAGLAALLLWWSPGMSEGRSSGGVGTSGSKKPLAHTPGIRAVCVQDSFTQGSHGGGWGSSA---SSTGQGDGPAAASSKWEQSKQKGDLGYYFAHHITMKELAPEDYQMNGPKLLSK 131
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1318.2362.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LSJ7_ECTSI1.710e-6757.31Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835Z330_9STRA5.320e-2333.62Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5L1W9_9PHAE1.210e-2150.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 155..261
e-value: 2.7E-6
score: 29.6
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 31..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..30
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 10..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1318contigF-serratus_M_contig1318:44608..62847 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1318.2362.1mRNA_F-serratus_M_contig1318.2362.1Fucus serratus malemRNAF-serratus_M_contig1318 44322..63491 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1318.2362.1 ID=prot_F-serratus_M_contig1318.2362.1|Name=mRNA_F-serratus_M_contig1318.2362.1|organism=Fucus serratus male|type=polypeptide|length=268bp
MEEELWPTVVVWTIYLGATTAVAVAGSLWWRKEKKGARKSARKPPASSPG
IRVAKIQDSSGGSSSARGWGSLIGGSASSSQGRASKWEQSKKKGDLGYYF
AHHTALKELAPEDYQMNGPRLLRKGGAPAAAANGTTDTDVGSSSPPPPVA
PRRRAQQITSYSWEDYGEEVRLTFRQSGWQWGKVEEEEIGIEWGTRRFRM
SIDSREYGTHTIDLQNLAGEVGDVRVLKMKNRLSVTLVKGGRGSHSKRAP
WEKLQAPPEKRPDEDTK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone