prot_F-serratus_M_contig1317.2361.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1317.2361.1
Unique Nameprot_F-serratus_M_contig1317.2361.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length310
Homology
BLAST of mRNA_F-serratus_M_contig1317.2361.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 6.320e-75
Identity = 162/330 (49.09%), Postives = 202/330 (61.21%), Query Frame = 0
Query:    5 GGGKDSSWVPPSEFPPGHEESPVEGGGTAAGTRCLANADESEGSGKHGDKSNGELASSNGTGHAEYLKALGPLKLRDEADPFSMDLGVTEKGDIVKVLEASAADARWVRVAYRGREDGWILSANKRGPTLVPHEDPASAAADFDAQEASHAVAAAAASVAAAENLDDRPLKSK--------------------GGNESSWVPPSEFPPGHEESSAAAGTVEVAKTGGEE----KEGSGKTLGSDPIGDSAESAGEIGRPEFMQTLGPLKIRDEPDPFSMDLGVTVTGEIVKVLEASATDTRWLRVAYRGREDGWILSANKRGPTLVPLDD 310
            GGGK  +WVPPSEFPPG E  PV  G         A+A     + + G+ S G+ A S     +EY+ ALG +K+R+EADPFSMDLG  +KGDIVKVLE S     WVRV YRGREDGW+L+ANKRGPTLVP ED  SAA +FDAQEA+ A ++  A    AE+  DRPL                       GG + +WVPPSEFPPG E+  A++G   V    G+E    K  +G+ + +    D A     I  PE++  LG +K+R+E DPFSMDLG    G+IV+VLE S     W+RV YRGREDGW+L+ANKRGPTLVP +D
Sbjct: 1217 GGGK-GAWVPPSEFPPGQEGGPVSSGDGGDALVKEASAGSVVDAARQGNDSAGDEAVS-----SEYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLETSEL---WVRVCYRGREDGWVLTANKRGPTLVPSEDQDSAAGEFDAQEAAFASSSGGA---VAEDPSDRPLTGAKPPPSAPTVATGDSEDRPLTGGGKGAWVPPSEFPPGEEDEPASSGGSGVV---GDEAFSVKPSAGEGVDAGGQADGAAGGAAIS-PEYLTALGFVKVREEADPFSMDLGSVKKGDIVRVLETSKL---WVRVCYRGREDGWVLTANKRGPTLVPSED 1527          
BLAST of mRNA_F-serratus_M_contig1317.2361.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 249 bits (636), Expect = 3.460e-71
Identity = 161/327 (49.24%), Postives = 188/327 (57.49%), Query Frame = 0
Query:    5 GGGKDSSWVPPSEFPPGHEESPVEGGGTAAGTRCLANADESEGSGKHGDKSNGELASSNGTGHAEYLKALGPLKLRDEADPFSMDLGVTEKGDIVKVLEASAADARWVRVAYRGREDGWILSANKRGPTLVPHEDPASAAADFDAQEASHAVAAA-------------------AASVAAAENLDDRPLKSKGGNESSWVPPSEFPPGHEES--SAAAGTVEVAKTGGEEKEGSGKTLGSDPIGDSAESAGEIGRPEFMQTLGPLKIRDEPDPFSMDLGVTVTGEIVKVLEASATDTRWLRVAYRGREDGWILSANKRGPTLVPLDD 310
            GGGK  +WVPPSEFPPGHE     GG  +                       G+ A S     AE+  ALG +K+R+EADPFSMDLG   KGDIVKVLE S     WVRV YRGREDGW+L+ANKRGPTLVP ED ASAA +FD QEA+ A                       AA  AA    +DRPL   GG + +WVPPSEFPPG E+   S   G   + K    E        G+D  GD A S+      E+M  LG +K+R+E DPFSMDLG    G+IVKVLEAS     W+RV YRGREDGW+L+ANKRGPTLVP +D
Sbjct:  851 GGGK-GAWVPPSEFPPGHE-----GGAPSXXXXXXXXXXXXXXXXXXXXXXAGDEAVS-----AEFFTALGFVKVREEADPFSMDLGSVRKGDIVKVLETSKL---WVRVCYRGREDGWVLTANKRGPTLVPSEDQASAAGEFDEQEAAFAANGGGALPEDPSDRPLTGAKPPPAAPTAATGASEDRPLT--GGGKGAWVPPSEFPPGQEDGPVSRGDGGDALVKKASAESVVDAPGQGNDSAGDEAVSS------EYMTALGFVKVREEADPFSMDLGSVKKGDIVKVLEASKL---WVRVCYRGREDGWVLTANKRGPTLVPSED 1152          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1317.2361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5L4T0_9PHAE6.320e-7549.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G7L6_ECTSI3.460e-7149.24Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003646SH3-like domain, bacterial-typePFAMPF08239SH3_3coord: 247..298
e-value: 2.1E-6
score: 27.9
coord: 76..127
e-value: 1.7E-6
score: 28.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1317contigF-serratus_M_contig1317:218712..221071 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1317.2361.1mRNA_F-serratus_M_contig1317.2361.1Fucus serratus malemRNAF-serratus_M_contig1317 218712..221073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1317.2361.1 ID=prot_F-serratus_M_contig1317.2361.1|Name=mRNA_F-serratus_M_contig1317.2361.1|organism=Fucus serratus male|type=polypeptide|length=310bp
PLNAGGGKDSSWVPPSEFPPGHEESPVEGGGTAAGTRCLANADESEGSGK
HGDKSNGELASSNGTGHAEYLKALGPLKLRDEADPFSMDLGVTEKGDIVK
VLEASAADARWVRVAYRGREDGWILSANKRGPTLVPHEDPASAAADFDAQ
EASHAVAAAAASVAAAENLDDRPLKSKGGNESSWVPPSEFPPGHEESSAA
AGTVEVAKTGGEEKEGSGKTLGSDPIGDSAESAGEIGRPEFMQTLGPLKI
RDEPDPFSMDLGVTVTGEIVKVLEASATDTRWLRVAYRGREDGWILSANK
RGPTLVPLDD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003646SH3-like_bac-type