prot_F-serratus_M_contig1317.2359.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1317.2359.1
Unique Nameprot_F-serratus_M_contig1317.2359.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length94
Homology
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BLAST of mRNA_F-serratus_M_contig1317.2359.1 vs. uniprot
Match: D7G7L6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7L6_ECTSI)

HSP 1 Score: 102 bits (253), Expect = 3.370e-23
Identity = 51/65 (78.46%), Postives = 56/65 (86.15%), Query Frame = 0 
Query:    1 MRAAGTSKLREEADSLSMEIGTVAAGELVRVVETSGLWVRVNYRGASDGWVLTANKRGPILSPAE 65
            MRAAG  KLREEADSLS+E+GTV+ GELVRV +TSGLWVRV YRG S GWVLTANKRG  L+PAE
Sbjct:  506 MRAAGQLKLREEADSLSLELGTVSRGELVRVEQTSGLWVRVLYRGDSSGWVLTANKRGASLTPAE 570
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BLAST of mRNA_F-serratus_M_contig1317.2359.1 vs. uniprot
Match: A0A6H5L4T0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4T0_9PHAE)

HSP 1 Score: 99.8 bits (247), Expect = 2.190e-22
Identity = 49/65 (75.38%), Postives = 56/65 (86.15%), Query Frame = 0 
Query:    1 MRAAGTSKLREEADSLSMEIGTVAAGELVRVVETSGLWVRVNYRGASDGWVLTANKRGPILSPAE 65
            MRAAG  KLREEADSLS+E+GTV+ G+LV+V +TSGLWVRV YRG S GWVLTANKRG  L+PAE
Sbjct:   67 MRAAGQLKLREEADSLSLELGTVSRGQLVKVEQTSGLWVRVLYRGDSSGWVLTANKRGASLTPAE 131
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1317.2359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G7L6_ECTSI3.370e-2378.46Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4T0_9PHAE2.190e-2275.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.30.30.40coord: 1..57
e-value: 2.9E-7
score: 32.1
IPR003646SH3-like domain, bacterial-typePFAMPF08239SH3_3coord: 8..53
e-value: 1.2E-8
score: 35.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1317contigF-serratus_M_contig1317:210747..213840 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1317.2359.1mRNA_F-serratus_M_contig1317.2359.1Fucus serratus malemRNAF-serratus_M_contig1317 210204..213967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1317.2359.1 ID=prot_F-serratus_M_contig1317.2359.1|Name=mRNA_F-serratus_M_contig1317.2359.1|organism=Fucus serratus male|type=polypeptide|length=94bp
MRAAGTSKLREEADSLSMEIGTVAAGELVRVVETSGLWVRVNYRGASDGW
VLTANKRGPILSPAEGARRRGPGVRGSGGSGGVGVGGRCFNGK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003646SH3-like_bac-type