mRNA_F-serratus_M_contig1313.2342.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1313.2342.1 vs. uniprot
Match: D7FTX5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTX5_ECTSI) HSP 1 Score: 254 bits (650), Expect = 1.460e-75 Identity = 165/424 (38.92%), Postives = 216/424 (50.94%), Query Frame = 3
Query: 411 MFTDEHSVDIDRKIQHGWDSVLQLDALLKAWDIHSFNSTQARQALNVLHRLEEGYRQGVGDLDKECNRHRILLVTESVRRSMSSSEGRPQDGQSPCNPLLWQMKNAGLVDQKVAKARVTVVRHSVKQDTSARKPGHQGLGRFEDDPWGVSQGLSGIQGIHCRPGSASRQEEN--ISVTVVVMPKMNLGYRARDKLWTGYLAHRQLAAGSCVMYSLGFSDRDPMETLFYYEHVKARPAVTLLSRRRLREEDVLFRYWARCALICLAQISEQSTFYLVRQISISNLMIAEQGTVVRLGGLLWGPEMCGAGKAIEECLQAREAELCLSYAGVLEDLLGIGQARG----GSNDTSPP-----------RPSVMLVNILACLRLPPVEREGISLKGLLGHRYFAPLHLEDMDNCLGIAWKTFINQESDV 1631
M+ D+ S I+ KI + +S L ALL AW++ SFN TQ RQAL V+HRLE R+GV L KE D++VAK RV + + + S + G G +DDPW VSQGL+G + I CR G A+R N + VTVV MPK+ GY AR+KLW +LAHRQLA G R AL C+AQ+SEQSTF L R+IS +NLMI EQG V+RLGGL WG E+ G G+A E L+ R+ +LCL A LE LLG G+++ G+ D +P + S+MLVN+L+ LRLP REGI+LKGLLGH+YFAPL D+++ + AWKT ++Q +V
Sbjct: 1 MYRDDASTGIESKISNAHESAKDLQALLHAWNMESFNHTQTRQALKVIHRLEMSRRKGVEGLRKEQ-------------------------------------------DRQVAKLRVQSISYPGALNASRKHSATHGYGGTQDDPWEVSQGLAGREAISCRRGLANRPNSNEELPVTVVAMPKVETGYSAREKLWRAFLAHRQLALG-------------------------------------------------RGALACVAQLSEQSTFTLERRISTANLMIGEQGCVLRLGGLRWGAEIHGVGQATETALRRRDTDLCLGLAETLEGLLGFGRSKDDDETGAEDNNPADSKELGSNTQDKMSLMLVNVLSWLRLPAGSREGITLKGLLGHQYFAPLRHTDVESEIPSAWKTLMDQGKEV 332
BLAST of mRNA_F-serratus_M_contig1313.2342.1 vs. uniprot
Match: A0A6H5KMA3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMA3_9PHAE) HSP 1 Score: 73.6 bits (179), Expect = 7.600e-12 Identity = 34/58 (58.62%), Postives = 46/58 (79.31%), Query Frame = 3
Query: 1458 SVMLVNILACLRLPPVEREGISLKGLLGHRYFAPLHLEDMDNCLGIAWKTFINQESDV 1631
S+MLVN+L+ LRLP REGISLKGLLGH+YFAPL D+++ + AW+TF++Q +V
Sbjct: 82 SLMLVNVLSWLRLPAGSREGISLKGLLGHQYFAPLRHTDIESEIPSAWRTFMDQGKEV 139 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1313.2342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1313.2342.1 >prot_F-serratus_M_contig1313.2342.1 ID=prot_F-serratus_M_contig1313.2342.1|Name=mRNA_F-serratus_M_contig1313.2342.1|organism=Fucus serratus male|type=polypeptide|length=514bp MDGVPQSLGGGGSDDPLVRLFKAACTSGNTQLAEENDSPGRHIFITSEQQback to top mRNA from alignment at F-serratus_M_contig1313:63321..92195- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1313.2342.1 ID=mRNA_F-serratus_M_contig1313.2342.1|Name=mRNA_F-serratus_M_contig1313.2342.1|organism=Fucus serratus male|type=mRNA|length=28875bp|location=Sequence derived from alignment at F-serratus_M_contig1313:63321..92195- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1313:63321..92195- >mRNA_F-serratus_M_contig1313.2342.1 ID=mRNA_F-serratus_M_contig1313.2342.1|Name=mRNA_F-serratus_M_contig1313.2342.1|organism=Fucus serratus male|type=CDS|length=3084bp|location=Sequence derived from alignment at F-serratus_M_contig1313:63321..92195- (Fucus serratus male)back to top |