prot_F-serratus_M_contig1312.2339.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1312.2339.1
Unique Nameprot_F-serratus_M_contig1312.2339.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length231
Homology
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5KAK0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAK0_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 2.710e-37
Identity = 84/234 (35.90%), Postives = 136/234 (58.12%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +YV  SG+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V TPG G  + T +P+ ++  P +K+    Y ++TG ++      RFD+ Y A+  +   S P  ++M A KH+L Y RG P L I Y R   F L    D+++G  NP    ST G  + L+G ++ +    Q + AQST E E+
Sbjct:   41 VYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKKN---YQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVETEI 269          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5KUJ3_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUJ3_9PHAE)

HSP 1 Score: 139 bits (349), Expect = 1.150e-35
Identity = 83/234 (35.47%), Postives = 135/234 (57.69%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +YV  +G+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+ + +D E+GT++ISQ  ++ + L+++ M + N V TPG G  + T +P+ ++  P  K+    Y ++TG ++      RFD+ Y A+  +   S P  ++M A KH+L Y RG P L I Y R   F L    D+++G  NP    ST G  + L+G ++ +    Q + AQST EAE+
Sbjct:   41 VYVYTTGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIGVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTEKKN---YQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPGLPIVYKRGQ-FRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEI 269          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5KE92_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE92_9PHAE)

HSP 1 Score: 141 bits (355), Expect = 8.060e-35
Identity = 85/234 (36.32%), Postives = 137/234 (58.55%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +YV  SG+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V TPG G  + T +P+ ++  P +K+    Y ++TG ++      RFD+ Y A+  +   S P  ++M A KH+L Y RG P L I Y R   F L    D+++G  NP    ST G  + L+G ++ +    Q + AQST EAE+
Sbjct:  524 VYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKK---IYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEI 752          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5JF89_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF89_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 2.840e-34
Identity = 84/234 (35.90%), Postives = 136/234 (58.12%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +YV  SG+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V TPG G  + T +P+ ++  P +K+    Y ++ G ++      RFD+ Y A+  +   S P  ++M A KH+L Y RG P L I Y R   F L    D+++G  NP    ST G  + L+G ++ +    Q + AQST EAE+
Sbjct:  368 VYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKK---IYQSMAGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEI 596          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5KQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQD0_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 7.820e-34
Identity = 83/234 (35.47%), Postives = 136/234 (58.12%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +YV  SG+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V T G G  + T +P+ ++  P +K+    Y ++TG ++      +FD+ Y A+  +   S P  ++M A KH+L Y RG P L I Y R   F L    D+++G  NP    ST G  + L+G ++ +    Q + AQST EAE+
Sbjct:  160 VYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTRLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKK---IYQSMTGSILYLAQCTQFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEI 388          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5K7T8_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7T8_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 4.360e-33
Identity = 83/234 (35.47%), Postives = 139/234 (59.40%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +YV  SG+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V TPG G  + T +P+ ++  P +K+    Y ++TG ++      RFD+ Y A+  +   S P  ++M A KH+L Y RG P L I  S+  +F L+ L  +++G  NP    ST G  + L+G ++ +    Q ++A ST EAE+
Sbjct:  567 VYVYTSGNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKK---IYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYRRGNPVLPIV-SKRGHFRLVALTGSSFGA-NPGNGRSTTGYLFFLAGGLISYGAKTQTLSAHSTVEAEI 795          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5JJR8_9PHAE (Integrase catalytic domain-containing protein n=11 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJR8_9PHAE)

HSP 1 Score: 134 bits (338), Expect = 1.630e-32
Identity = 82/240 (34.17%), Postives = 136/240 (56.67%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNS------NFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +YV  SG++ ++ ++YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V TPG G  + T +P+ ++  P +K+    Y ++TG ++      RFD+ Y A+  +   S P  ++M A KH+L Y RG P L I Y R           L    D+++G  NP    ST G  + L+G ++ +    Q + AQST EAE+
Sbjct:  747 VYVYTSGNSIVISSVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVPRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKK---IYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKREQIRLAAEQIRLAAFTDSSFGA-NPDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEI 982          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5KGS8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGS8_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 1.290e-29
Identity = 75/206 (36.41%), Postives = 120/206 (58.25%), Query Frame = 0
Query:    7 GDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSG 208
            G+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V TPG G  + T +P+ ++  P +K+    Y ++TG ++      RFD+ Y A+  +   S P  ++M A KH+L Y RG P L I Y R   F L    D+++G  NP    ST G   +LSG
Sbjct:  122 GNIIVILTVYVDDILITGGDQQLVDQKKKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEHYVNTLLERFGMQEANPVSTPGYGAEISTNQPQDQILGPTDKK---IYQSMTGSILYLAQCTRFDLSYAALQLSKACSNPAQVNMTAAKHVLRYLRGNPVLPIVYKRGQ-FRLAAFTDSSFGA-NPDNGRSTTGYISLLSG 322          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6H5JDU8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDU8_9PHAE)

HSP 1 Score: 122 bits (305), Expect = 2.090e-28
Identity = 80/234 (34.19%), Postives = 134/234 (57.26%), Query Frame = 0
Query:    1 MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGL-TAEPEGRV--PFNKEGTTEYHNITGPLIIFYVFARFDI-YFAVHAALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAEL 230
            +Y+  SG+  ++LT+YVDD+LITG +   V +  K L D F M  + +V R++G+D+ +D E+GT++ISQ  ++ + L+++ M + N V T G G  + T +P+ ++  P +K+    Y ++T  ++      RFD+ Y A+  +   S P  +++ A KH+L Y RG P L I Y R   F L    D+++G  N     ST G  + L+G ++ +    Q + AQST EAE+
Sbjct:  261 VYMYTSGNIIVILTVYVDDILITGGDQQLVDQ-KKELTDRFEMTDMGEVKRILGIDVQRDYEQGTLAISQEYYVNTLLERFGMQEANPVSTLGYGAEISTNQPQDQILGPTDKK---IYQSMTRSILYLAQCTRFDLSYAALQLSKACSNPAQVNLTAAKHVLRYLRGNPVLPIVYKRGQ-FWLAASTDSSFGA-NLDNGRSTTGYLFFLAGGLISYGAKTQTLTAQSTVEAEI 488          
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Match: A0A6D2K0I3_9BRAS (Uncharacterized protein n=1 Tax=Microthlaspi erraticum TaxID=1685480 RepID=A0A6D2K0I3_9BRAS)

HSP 1 Score: 122 bits (305), Expect = 4.300e-28
Identity = 77/235 (32.77%), Postives = 132/235 (56.17%), Query Frame = 0
Query:    1 MYVKGSG-DNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVTRLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTP-GIGNGLTAEPEGRVPFNKEGTTEYHNITGPLIIFYVFARFDIYFAVH-AALFISKPTPIHMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAY-GTVNPQKSWSTPGSTYVLSGRVVYFRTIIQRIAAQSTTEAELI 231
            +YVK  G ++Y+ L LYVDD+ +   +   + K+   L  EF M  +   +R++G+DI +D+E+GT+ +SQ  ++   + +++MS   +V TP G    L++  E     + E    Y +  G ++   V  R D+ +A+   + F+SKP  +H  AVK +L Y R   DL++ Y++  NF +   CD+ Y G ++ ++S S  G  + + G  V +++ +Q IAA STTEAE I
Sbjct:  998 VYVKEVGHEDYIYLLLYVDDMFLAARSMTEIRKLKNVLSQEFEMKDMGAASRILGIDIKRDREKGTLCLSQSRYIEKVIQRFNMSGAKIVTTPIGAHFRLSSTKEDEEGVDIE-IVPYSSAVGSIMYAMVGTRPDVAYAIGLVSRFMSKPGAVHWEAVKWLLRYLRSSTDLNLVYTKGENFRVQGYCDSDYAGDLDRRRSIS--GYVFTVGGNTVSWKSSLQSIAALSTTEAEYI 1229          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1312.2339.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KAK0_9PHAE2.710e-3735.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KUJ3_9PHAE1.150e-3535.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KE92_9PHAE8.060e-3536.32Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JF89_9PHAE2.840e-3435.90Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5KQD0_9PHAE7.820e-3435.47Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K7T8_9PHAE4.360e-3335.47Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JJR8_9PHAE1.630e-3234.17Integrase catalytic domain-containing protein n=11... [more]
A0A6H5KGS8_9PHAE1.290e-2936.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JDU8_9PHAE2.090e-2834.19Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6D2K0I3_9BRAS4.300e-2832.77Uncharacterized protein n=1 Tax=Microthlaspi errat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..92
e-value: 7.2E-15
score: 55.3

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1312contigF-serratus_M_contig1312:93277..93969 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1312.2339.1mRNA_F-serratus_M_contig1312.2339.1Fucus serratus malemRNAF-serratus_M_contig1312 93277..94155 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1312.2339.1 ID=prot_F-serratus_M_contig1312.2339.1|Name=mRNA_F-serratus_M_contig1312.2339.1|organism=Fucus serratus male|type=polypeptide|length=231bp
MYVKGSGDNYLMLTLYVDDLLITGPNNNTVAKVPKTLIDEFPMAYVWDVT
RLVGVDIIQDKERGTISISQVPHLLSPLDKYDMSDYNLVRTPGIGNGLTA
EPEGRVPFNKEGTTEYHNITGPLIIFYVFARFDIYFAVHAALFISKPTPI
HMGAVKHILHYFRGRPDLHITYSRNSNFELIDLCDAAYGTVNPQKSWSTP
GSTYVLSGRVVYFRTIIQRIAAQSTTEAELI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2