mRNA_F-serratus_M_contig1311.2336.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: A0A6H5J7J9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J7J9_9PHAE) HSP 1 Score: 520 bits (1338), Expect = 2.410e-163 Identity = 286/590 (48.47%), Postives = 377/590 (63.90%), Query Frame = 1
Query: 1366 AVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERNSATIEGPAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGY---ADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVVLCHALGI 3126
AVE G+ EFI+ F N+A GGA+RL GTV + + SF NSAT G AI+ + + GA SF+ N C G + E D + R+ TVC CPE CDDC +T + P C L+HT+A E G++LE LD+ GYWRAT+ S +L CYNTDAC GG+TG +C +GY + G CSVCE G++ +L TC +CS S + YL+S + D+ H R+L+ +P+Q++K +VV+WQILTQFA VAN+TYP+ Y++FL IDV+N DLG L+AGC+WP IDFHDRL+ TLGPL A+ +L TY A+ + Q+ P +R KH+SALLL+ FL+YSSVSST+F+ FACE LDD YLR DY I CTD KH+A ++YAG+MVVVYPVGIPL+YA++L++ R +L G AR + A I LW PYRP +YYEVIEC RRIMLTGVV FIFP DAAQIA+T++++F F L+ + M PY S +TWLSR GH ++F S F ALL +VD++ E E SQ+ F V V HV+LIL ++ +GI
Sbjct: 461 AVETLSGRQEFISCDFEGNSAYVGGAMRLGGTVDVRNCSFLSNSATSRGLAIAVVAFANISGA-SFDRNELYCEAGLYRE--DTEGEPSARFETVCLDCPE---CDDCHVTRSSVTPACELPLEHTTAVEPGLTLETLDIHGGYWRATSESDKILACYNTDACTGGQTGADSFCASGYMGPCEEGEDCSVCETGFAPSLAHTCTRCSSSRRQGLLAVAVIAALVAVFAIVTIFKYLLSTEVDEGNAGCFHRRILRAVPVQTLKIIVVVWQILTQFADVANITYPQAYQDFLSAIDVVNFDLGSALAAGCLWPDIDFHDRLLLGTLGPLVAVGFLVMTYRVAVRRNGTAGGQT-PADNTR--------HKHLSALLLLTFLIYSSVSSTVFQTFACETLDDGIEYLRVDYTIHCTDAKHKAFEVYAGIMVVVYPVGIPLLYAILLFQRRDVL---GDARADKTVAQPIAGLWEPYRPERFYYEVIECGRRIMLTGVVAFIFPNDAAQIAITMLVAFFFSLVFEVMSPYTSESDTWLSRGGHVIVFLSMFDALLLKVDVSSESEQSQDVFAGVFVAGHVLLILAIVVEVVGI 1032
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: A0A6H5JWT9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWT9_9PHAE) HSP 1 Score: 514 bits (1325), Expect = 1.800e-160 Identity = 295/648 (45.52%), Postives = 403/648 (62.19%), Query Frame = 1
Query: 1201 YSFGNAIGQSYEGVVFDSNKAARGGAVATFSTGQESQ-----NXXXXXXXXXXXXXXXXXAVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERNSATIEGPAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGI--DFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVVLCHALG 3123
+S N GQ +EGV F N AA GGAVAT+ TG + VE++ G++ F++S F DN A GGAL+L G + +F NSA+ G AI+ +G V+ + F N F C GEF+E + + RY TVC CPE +C C++ + P CS LD+T ++E G+SLE L + +GYWRA+N+S +L CYN +AC GG+TG CD GY GPYC+VCE GY+S+L TC +CS S XXXXXX +L+S + + + H RL +PLQS K ++V+WQILTQFAS AN+++P VY++F+ +DV+N DLG ++++GC W I DFHDRL+ +TLGPL + L +TYA A Q SS + S+A E + KH+SA LL+ FLVYSSVS+T+F+MFAC++LDD YLRADY+ILCT KH ALQ+YA M+ +YPVGIPL+YA +L+ R +L M A + SA + +LW PYRP +YYEVIEC RR++LTGVVVFI+P AAQ+AVTI+I+F FL++ + + PY S + WLSR GH ++F S F LL +VD++DER SQ F V+V H ++ L V+ A+G
Sbjct: 499 FSSANTAGQYFEGVTFQYNSAAVGGAVATYGTGNGDEVTPVPASFVGCRFMSNAATETGGGVESAFGQENFVSSHFQDNYADVGGALQLGGKTNVDGCAFVANSASSRGLAIAAVGFVNISDTL-FEGNTFFCQAGEFVENKEQEEGDSGRYDTVCFDCPERSECYSCSVQEAAGRPTCSVALDNTVSEEAGVSLETLSMSRGYWRASNSSLIILACYNPEACLGGQTGVDNSCDNGYQ--GPYCAVCESGYASSLAHTCTQCSSSRRNGFVVAAAIAVVXXXXXXXXXCAHLIS--GEVSEQSCLHRRLSAMLPLQSFKIIIVVWQILTQFASAANISFPDVYQDFINALDVVNFDLGSLVASGC-WADINVDFHDRLLVSTLGPLLVVGGLASTYAVA------QRRNSSASGGSQAGV-EAIRHKHLSAFLLVTFLVYSSVSATVFQMFACDKLDDGHTYLRADYRILCTSAKHEALQVYAAFMIALYPVGIPLLYAYLLHHRRDVL-MDPTA--DKASAQSTADLWEPYRPERFYYEVIECGRRVLLTGVVVFIYPNTAAQVAVTILIAFFFLMVYEMLAPYRSDSDMWLSRGGHVIVFLSMFDVLLLKVDVSDERTESQRVFAGVIVAGHCLMFLAVIVEAVG 1130
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: D7FRV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRV1_ECTSI) HSP 1 Score: 483 bits (1242), Expect = 1.180e-149 Identity = 281/640 (43.91%), Postives = 383/640 (59.84%), Query Frame = 1
Query: 1201 YSFGNAIGQSYEGVVFDSNKAARGGAVATFSTGQES------QNXXXXXXXXXXXXXXXXXAVEASVGKDEFINSSFLDNAAGAGGALRLSGT-VGMWDVSFERNSA-TIEG-PAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVL 3093
Y A+G + G+ F N A GGAV ++G ++ A+++S G D +S F+ N A GGALRL+G V + +F+ N+A T++G PA+SN+GD+D ++ F NY C G F++Y Y S RY VC GCP + D T+ E VP C+ TL++T + S+E++ +D GYWRAT T+ VL CYN DAC GG TG GYC GY GPYC++C + Y T+ F C KCS A L YLVS + + V + + +S+K +VV+WQILTQF+ VANVTYP +Y+ FL VIDV+N D+GW++SAGC+ DFHD L+ T+GP+ + LGATYA A + R AIAR V RKH+SA+LL+ FLVYSSVSST+FRMF C+ L D YLRADY I C+ KHRALQI+A MV++YPVGIPL Y ++LY R L+ G R P A TI LW PY P YY EV+EC RR++LTGVVVFI+P AAQIA++++++F FL+IS+ + P+ S+ + W+SR GH ++F + F ALL +VD++DERE SQ F ++V+ ++VL
Sbjct: 393 YISNTAVGPTLVGLTFTGNTAHTGGAVYVTASGVDAVFGDGYPTTFAGCYFADNFADLSGGAIDSSSGDDSIESSDFISNKAVIGGALRLAGNDVSIKYCTFDGNAAGTVDGGPAVSNVGDLDVWNSV-FRRNYIECPPGSFVDY---YESEGGRYEAVCDGCPAAD--DGITMGVENLVPTCTETLENTRSDGANTSIEDIRIDPGYWRATTTTTTVLACYNADACLGGITGEAGYCREGY--YGPYCAICTENYGRTMAFECTKCSSGEGVAVGVIFVSALAVGG---AALVAYLVSNEREGXXXXXLIVLVKDKVSFRSLKIVVVVWQILTQFSDVANVTYPHIYQRFLDVIDVLNFDIGWVISAGCV-VDFDFHDHLLTATIGPIIVVGVLGATYAAASYRNRGS---------DEAIAR--VFRKHVSAVLLVTFLVYSSVSSTVFRMFVCDPLADSNSYLRADYSIQCSSTKHRALQIFAVFMVLLYPVGIPLFYGILLYNTREALK-DGSCRQAHPQAKTISALWEPYTPKRYYNEVVECGRRMLLTGVVVFIYPNSAAQIAISLLMTFAFLVISEVLAPFASAWDCWVSRCGHILIFVTMFVALLLKVDVSDEREGSQRLFAGILVVTNLVL 1008
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: A0A6H5K0E9_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K0E9_9PHAE) HSP 1 Score: 492 bits (1266), Expect = 3.570e-149 Identity = 260/585 (44.44%), Postives = 368/585 (62.91%), Query Frame = 1
Query: 1366 AVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERNSATI-EGPAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVVLCHA 3117
A+ ++ G+D NS F N+AG GGALRL+G + + SF N++ EG A+SNIG + + SF+ N F C G F N + +C+GC CD C + + P+C+ +DH+++ ++L+ L +D+G+WRA+ +S VL CY+ DAC GG TG GYC+ GY GPYC +C GY+ L+F C KCS+++ A ++ Y+ S + R + +YIPLQS+K ++V WQILTQF SVANVTYP VY++ L V+DV N DL W+LSAGC+ ++FH RL+ +T+ P+ AL+ L TYA A R +P + + ++ KH++ +LL+ F VYSSVSST+FR FAC+ LD K YLRADY I C ++HR +Q+YAG M+V+Y VGIP +YA +L++ R +L+ P R P +I NLW PY+P ++YYEVIECFRR++L GVVVFI+P AAQIAVT++I+F F L+S+G+ PY S +TW+SR GH V+F S + ALL +VD++DER +SQE F V+V VHV +IL VL A
Sbjct: 922 AINSAAGEDAIENSVFEGNSAGTGGALRLAGEAYISNCSFRENTSDEGEGAAVSNIGFISSITNASFDGNGFDCPAGTFR----NVTGSVDHFEAICNGCETT--CDGCVFAEGSLAPICTEVMDHSTSDGGNVTLQTLSIDRGFWRASTSSTEVLACYHADACLGGVTGASGYCEEGYE--GPYCGICSDGYTEQLSFACSKCSENSAGGIAVAVVLALLIVFLAVAVVS-YVTSGEVGMGRKGGIVELVTRYIPLQSLKIVIVSWQILTQFTSVANVTYPDVYQDLLDVLDVFNFDLSWLLSAGCV-VDMNFHGRLLVSTISPIVALLLLACTYAAAARINRGEPEKLN-----------IIWNKHVTVVLLLTFFVYSSVSSTLFRAFACDDLDYSKDYLRADYSIECNSSEHRGIQVYAGFMIVIYTVGIPALYAELLFKSRDVLKDEDPDREEPPRVKSISNLWEPYKPAVFYYEVIECFRRVLLAGVVVFIYPNTAAQIAVTLLIAFAFALLSEGLAPYASRWDTWISRVGHIVVFLSMYVALLLKVDVSDERASSQEVFESVLVAVHVCMILFVLVEA 1485
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: D7G2Z8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2Z8_ECTSI) HSP 1 Score: 469 bits (1208), Expect = 6.730e-145 Identity = 273/642 (42.52%), Postives = 378/642 (58.88%), Query Frame = 1
Query: 1210 GNAIGQSYEGVVFDSNKAARGGAVATFSTGQE--------SQNXXXXXXXXXXXXXXXXXAVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERN-SATIEGPAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVVL 3108
G A+G ++ + SN A GGA++ +G + AV+ + G+D+F+NS F N AG GGALRL+GT + + SF N S G A+SNIG V + +SF+ N + C G FLE + SGT Y +C GCP +C+ C+ + VP CS L+H+++ ++L+ L ++ GYWRAT +S+ VLECYN DAC GG TG+ YC GY GPYC+VC GY++ L C KCSD L Y VS + + R R +++PLQS+K ++V WQILTQF SVAN+ +P VY+ FL +++ N DLGW+LSAGC++ +DFHDRL+ +T+ P+ L++L A YA A AR S Q V KH+S +LL+ FLVY+SVS+ +F+ FACE LDD K YLRADY+I C KH A Q+YAG M+V+Y VGIP +Y L+R +LR R + +LW PYRP+++YYEVIEC RR++L GVVVFI+P AAQIAV ++I+ VF +IS+ + PY S +TWL R GHAV+ S + ALL +VD++DER +SQ F ++V HV ++ VVL
Sbjct: 329 GTAVGPTFVNISLVSNSAQVGGAISLIGSGTSFNPEDYTPAPTTFEQCRFTSNRAIATGGAVDTAAGQDKFVNSVFEGNTAGTGGALRLAGTAEVNNCSFVENVSDDGGGAAVSNIGFVSSVSNLSFSRNVYGCQEGMFLECEE---SGT-LYEAICDGCPV--ECEGCSFEEPQLVPKCSDALEHSNSSGGTVTLDALVIEPGYWRATPSSENVLECYNADACLGGVTGSESYCLEGYE--GPYCAVCSGGYTARLGMACSKCSDRAGSIALGVSVSVAGLLFT--VALVSYAVSGESE-GRARGVVERTGRFVPLQSVKIVIVAWQILTQFTSVANIRFPHVYQRFLDALELFNFDLGWVLSAGCVFD-VDFHDRLLVSTIAPIVGLLFLAAVYAAA---ARNSHRSSEDLQR--------VWHKHVSLVLLLTFLVYASVSAVLFQTFACEELDDRKNYLRADYRIECDSPKHSAFQVYAGFMIVLYTVGIPALYGGFLFRDSDVLRRDEADREQLARIAPTADLWKPYRPSVFYYEVIECARRVLLAGVVVFIYPNTAAQIAVALLIAVVFAMISEALAPYASRWDTWLCRMGHAVVAVSMYVALLLKVDVSDERASSQRVFESLLVAAHVCMVGVVL 947
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: D7G301_ECTSI (Polymorphic Outer membrane protein G/I family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G301_ECTSI) HSP 1 Score: 474 bits (1220), Expect = 1.910e-144 Identity = 271/643 (42.15%), Postives = 383/643 (59.56%), Query Frame = 1
Query: 1210 GNAIGQSYEGVVFDSNKAARGGAVATFSTGQESQNXXXXXXXXXXXXXXXXX---------AVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERNSATIEG-PAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVVL 3108
G G + G F SN A GGAV+T +G +N A++++ G+D F+NS+F N AG GG LRL+GT + SF N + +G A+SNIG + + I+F+ N F C+ G +L+Y SG P Y C GC CD C + P C+ ++H ++ ++LE+L V++GYWRA+ +S+ V CYN+DAC GG TG GYC GY GPYC+VC GY++ L F C +CS + Y +S + R + RL QYIPLQS+K ++V WQILTQF SVANVTYP VY+ FL +DV N DL W+LSAGCI+ IDFHDRL+ +T+ P+ L++L TYA A+ R +A + +++ KH+S +LL+ FL+YSSVS+T+F+ F CE L+D YLRADY I C +KH+A Q+YAG MVVVY VGIP +YA +L+R R +L+ R ++ +LW PY+P+++YYEVIEC RR++L GVVVFIFP AAQIA+T++++F F+++S+G+ P+ S + WL+R GH V+F S + ALL +VD++ ER SQ + IV+V H +IL V+
Sbjct: 608 GTGFGPIFTGARFISNSAQVGGAVSTVGSGNLKENADISPPNPTTFDHCHFIDNRATATGGAIDSAAGQDAFVNSTFQGNRAGTGGGLRLAGTASLDTCSFVDNISDDQGGAAVSNIGSLLSVENITFSGNVFDCDPGMYLDY---NASGNP-YEAACGGCETA--CDGCFF-EPPVPPTCTDVMEHITSAGGTVTLEDLPVERGYWRASPSSEEVFACYNSDACLGGVTGRAGYCLKGYE--GPYCAVCSDGYTTELAFACTRCSGGAGRIALAAVLAVVVLCVAF--AVASYAMSGRVGDVR-SGVVARLGQYIPLQSVKIVIVAWQILTQFTSVANVTYPDVYKRFLDGLDVFNFDLSWVLSAGCIFD-IDFHDRLLASTVSPVIGLLFLAGTYAAAVSMNR-----------GKAESLQVIWNKHVSLVLLLTFLIYSSVSATLFKAFVCEELEDGTNYLRADYTIDCDSSKHKAFQVYAGFMVVVYVVGIPALYAFLLFRDRHVLKDHHADREQTARTTSTSDLWKPYKPSVFYYEVIECGRRVLLAGVVVFIFPNTAAQIAITLMMAFAFVMVSEGLAPFASKWDAWLNRTGHTVVFVSMYIALLLKVDVSGERAGSQRVYEIVLVAAHACMILAVM 1226
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: D8LSC0_ECTSI (Polymorphic Outer membrane protein G/I family n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LSC0_ECTSI) HSP 1 Score: 479 bits (1233), Expect = 1.310e-143 Identity = 272/645 (42.17%), Postives = 386/645 (59.84%), Query Frame = 1
Query: 1210 GNAIGQSYEGVVFDSNKAARGGAVATFSTGQE---------SQNXXXXXXXXXXXXXXXXXAVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERNSATIEG-PAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPH---VRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPS-ASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILV 3102
G G ++ F SN A GGAVA F +G + A++++ G D F++++F DNAAG GGALRL+GT + SF N + EG A+SNIG V+ ISF+ N F C G FL YN+ + VC+GC C C D VP C+ L+H+++ + +LE L + GYWRAT + VL CY+ DAC GG TGT GYC GY GPYC++C +GYS+ ++FTC+ CSD+ L V +VS R + R+ +YIPLQS+K +VV WQI+TQF +VANVTYP VY+ FL ++V N DL WMLSAGC+ +DFHDRL+ T+GP+ A + L TYA A+ R ++ T E+ V KH+ +LL+ F VYSSVS+T+FR FACE L+D K YL ADY+I C +KH+ ++YAG MV++Y GIP +Y+ +L+R R +L+ A + S A++ +LW PY+P+++YYEV+EC RR++L GVVVFI+P +AQIA+T++++F F+LIS+G+ PY S +TW++R GH V+ S + ALL +VD++ ER +SQ F V+V+ HVV+++V
Sbjct: 962 GAGAGPAFANTTFTSNSAQVGGAVAVFGSGNSKGVADIEPPNPTTFERCWFVGNRATATGGAIDSAAGHDYFVDTTFEDNAAGTGGALRLAGTASINSCSFVENFSDDEGGAAVSNIGTVESTENISFSANGFDCPSGTFL----GYNASADLFEAVCNGCQTA--CVGCAFADPLLVPTCTDLLEHSTSSDGRDTLETLSIQAGYWRATTSGTEVLACYHADACLGGVTGTSGYCLEGYE--GPYCAICSEGYSAQMSFTCRTCSDNAGGIALAAALAVVGLV------LLVAVVSYVSSGERNGKGRGIVERVGRYIPLQSVKIVVVAWQIMTQFTNVANVTYPHVYQNFLNGLEVFNFDLSWMLSAGCV-VDVDFHDRLLMATIGPIFAALLLVCTYAAAVRIHRG----ATETLEN-------VRHKHVFMVLLLTFFVYSSVSATLFRTFACETLEDGKTYLLADYRIECDSSKHKRFEVYAGFMVLLYTAGIPALYSFLLFRDRDVLKGREAAGQDLRSRATSTSDLWKPYKPSVFYYEVVECARRVLLAGVVVFIYPNSSAQIAITLIVAFTFVLISEGLAPYASRWDTWINRMGHVVVVASMYLALLLKVDVSKERSSSQGVFEAVLVVAHVVMVVV 1580
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: D7FHH1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHH1_ECTSI) HSP 1 Score: 464 bits (1193), Expect = 1.030e-142 Identity = 266/644 (41.30%), Postives = 375/644 (58.23%), Query Frame = 1
Query: 1201 YSFGNAIGQSYEGVVFDSNKAARGGAVATFSTG--------QESQNXXXXXXXXXXXXXXXXXAVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERN-SATIEGPAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVV 3105
Y AIG ++ V+FDSN A GGAV++ +G Q AV+++ G+D F ++ F N A GGALRL+G + + SF N S EG A+SN+G + + +F+ N F+C FL NY SG C GC CD C VP+CS + H+ + ++LE L +D GYWRATN+S VL CYN DAC GG TG YC GY GPYC++C YS+ L FTC KC + A ++ + P+ H++ +Y+PLQ++K LVV WQI+TQF S ANVTYP VY+ FL +DV N D+ W+LSAGC+ +DFHDRL+ +T+GP+ AL++L ATY S A ++V +H+S +LL+ FLVYS VSS +F+ FAC++L+ YLRADY+I C +KH+ ++YAG M+++YPVGIP Y +L R R +L R + P ++I NLW PYRP++YYYEVIEC RRI+LTG+VVFI+P AAQIA+T++++ VF ++S+ +RPY + +TW+SR HAV+F S + ALL +VD+++E+ +SQ+ F V+V H +IL V
Sbjct: 369 YVSDTAIGPTFSDVIFDSNSAQVGGAVSSLGSGNVKGGENDQLLPTTFSRCRFTFNRATATGGAVDSASGQDLFEDTVFRGNQAVTGGALRLAGRASLVNCSFVENLSDDGEGAAVSNVGVISEISNTTFSGNVFNCAPDTFL----NYTSGD-ALDEACSGCQTT--CDGCV--QPPVVPLCSDVIPHSRSDGGLVTLETLSIDPGYWRATNSSTEVLACYNVDACVGGITGATEYCVEGYE--GPYCAICSDDYSAQLGFTCSKCPNRAGGILLATALAVIGLFTVV-AVVSYVAWRVDPNTGCAMAGHLK--RYLPLQTLKILVVAWQIVTQFTSAANVTYPDVYQRFLNGLDVFNFDISWVLSAGCVMD-LDFHDRLLLSTIGPIMALLFLAATYRAG-----------SRINRGNAATLQLVWDRHVSMVLLLVFLVYSGVSSVVFQTFACDQLEGGGEYLRADYRIECDSSKHQGFRVYAGFMILLYPVGIPAFYGALLLRDRDVLEKDPDGREDPPRVASISNLWQPYRPSVYYYEVIECGRRILLTGLVVFIYPNTAAQIAITLIMTVVFAVLSEALRPYAQAWDTWVSRVSHAVVFMSVYVALLLKVDVSNEKGSSQKVFEAVLVAAHACMILAV 986
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: A0A6H5JY65_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY65_9PHAE) HSP 1 Score: 478 bits (1230), Expect = 1.320e-142 Identity = 280/641 (43.68%), Postives = 380/641 (59.28%), Query Frame = 1
Query: 1210 GNAIGQSYEGVVFDSNKAARGGAVATFSTGQESQNXXXXXXXXXXXXXXXXX--------AVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERNSATIEGPAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSGTPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRPHVRLLQYIPLQSIKTLVVLWQILTQFASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPA-RYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVV 3105
G IG + + F +N+A RGGAV + S+G E+ A+E + G D INS F NAAG GGALRL G+ + + +F N+A EGPA+SN+G +D G F+ N SC G +L+ D RY TVC GCP ++ + VP+C LDHT ++ ++E L++ GYWRATN S VL CYN DAC GG T P +C GY GPYCSVC +GYS +L FTC +C D C+ +LVS + + AR H R+++ +PLQSIK +VV+WQILTQF+SVANVTYP VY+ FL ++++N D+ W+ SAGC+ +DFH RL+ T+GPL AL L TY A RR + Q+ R KHMS +LL+ FLVYSSVS+T+F+ FACE LDD K YLRADY+I C ++H+A Q++AG+M++VYPVGIPL Y +LY+ R +L+ R P I +LW PY+P +YYEVIEC RR+ LTGVVVFI+P AAQ+AVT++I+F F++ S + PY S + +S GH ++F S + ALL +VD++DER SQE F V+V H +++ V
Sbjct: 1127 GVVIGPEFIQINFTANRAPRGGAVYSVSSGIETNGGGDPLFPVGYKDCLFRDNEASVTGGAIETAAGYDFAINSVFEANAAGVGGALRLGGSAILTNCTFIDNTAEDEGPAVSNLGVLDLEGTSRFSGNVLSCENGMYLDSVDG-----DRYQTVCDGCPVNNSDWIVSVENGDRVPICVVQLDHTRSEGGDTTIETLELSSGYWRATNDSANVLACYNEDACVGGMTNDPAFCQRGYE--GPYCSVCSEGYSMSLAFTCTECVDDHGGIAIMVVVGVFVLGAAIALCM--HLVSGEMEGARRGVIH-RVVKRLPLQSIKIVVVVWQILTQFSSVANVTYPDVYQRFLDGVNILNFDVLWIPSAGCLVE-VDFHGRLLVATIGPLVALALLAITYTVAK---RRSSGSEAALQKIR--------HKHMSMVLLITFLVYSSVSATVFQSFACEDLDDHKKYLRADYRIECDSSEHQAFQVFAGIMILVYPVGIPLFYGYLLYKHRRVLKSEDAGKRQTSPQVQPISDLWFPYKPGRFYYEVIECVRRMSLTGVVVFIYPNTAAQVAVTLMIAFSFVVTSVVLAPYVSKWDASISLVGHVIVFTSMYTALLSKVDVSDERADSQEVFAGVLVAAHACMVVAV 1745
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Match: A0A6H5KX12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX12_9PHAE) HSP 1 Score: 462 bits (1188), Expect = 1.260e-141 Identity = 286/748 (38.24%), Postives = 391/748 (52.27%), Query Frame = 1
Query: 1021 GGGINVRDQGNISWDGHMTISENMASEDGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYSFGNAIGQS-------YEGVVFDSNKAARGGAVATFSTGQESQNXXXXXXXXXXXXXXXXX---AVEASVGKDEFINSSFLDNAAGAGGALRLSGTVGMWDVSFERNSATIEGPAISNIGDVDRMGAISFNDNYFSCNVGEFLEYFDNYNSG-TPRYTTVCHGCPELEKCDDCTITDETTVPVCSTTLDHTSAKETGMSLEELDVDKGYWRATNTSKFVLECYNTDACKGGKTGTPGYCDTGYADVGPYCSVCEKGYSSTLTFTCKKCSDSTXXXXXXXXXXXXXXXXXXXACLTVYLVSMKPDKARMTRP-HVRLLQYIPLQSIKTLVVLWQILTQ----------------------------------FASVANVTYPKVYEEFLKVIDVINLDLGWMLSAGCIWPGIDFHDRLIFTTLGPLGALVYLGATYAFAMDKARRQPMQSSPTQESRAIAREMVDRKHMSALLLMYFLVYSSVSSTIFRMFACERLDDDKIYLRADYQILCTDNKHRALQIYAGLMVVVYPVGIPLVYAVMLYRLRGILRMGGPARYNCPSASTIINLWSPYRPTIYYYEVIECFRRIMLTGVVVFIFPGDAAQIAVTIVISFVFLLISDGMRPYNSSLETWLSRAGHAVLFFSFFAALLYRVDIADERETSQEAFGIVVVLVHVVLILVVLCHALGI 3126
GG ++ +SW+G T N A +GG +FG A+ S + VF++N A GGAVA + +G E+ AVE G+ +FI+ F N+A GGA+RL G+ + N +C VG + D G T R+ TVC CP + IT T P C+ L+H+SA G +LE L +DKGYWRATN S +L CYN DAC GG+TG+ +C +GY +GPYC+VCE +SS+L C +CS S A ++ YL+S + D+ H R+++ +P Q++K +VV+WQILTQ FA ANV+YP VY++FL IDVIN DLG +L+AGC+W IDFH RL+ +TLGPL + +L TY AM ++ + S A E + KH +ALLL+ FLVYSSVSST+F+ FACE LDD YLRADY+I C D H A +++AG M+ VYPVGIPL+YAV+L++ R +L G + +A +I LW PYRP +YYEV+EC RR+MLTGVVVFIFP DAAQIA+T++ +F F I + + PY S + WLSR GH ++FFS F LL +VD++DERE SQ F V+V HV+++L ++ +GI
Sbjct: 287 GGAVSTWFSSVVSWNGTATFENNEAGVNGGGLHANGCDSTSDSGGEVGEAAGATFINNRA-NFGGALYLSTCENAFNFAQFVFENNSALDGGAVAVYQSGSETFGLPVVFFECTFLDNVASGNGGAVETLAGQQQFISCDFEGNSADVGGAMRLGGSAVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNDLTCAVGSYRN--DTEEEGATARFGTVCFDCPPWDDSAGNDITRGTVTPECAAPLEHSSADAVGATLETLSIDKGYWRATNESDRILACYNADACSGGQTGSESFCASGY--MGPYCAVCEPRHSSSLAHNCTRCSGSRRQGLLAATVIAAIAAVLAIAAVSRYLLSTEHDEEGNAEWFHRRVVRAVPFQALKIIVVVWQILTQHRPKQKALEIVSGTYSSQPNQTYIFRATSLIPAQFADAANVSYPGVYQDFLSAIDVINFDLGSLLAAGCVWSEIDFHHRLLVSTLGPLIVVAFLAMTYRIAMHRSSSRADHHS--------AAEKIRHKHQAALLLLTFLVYSSVSSTVFQTFACETLDDGVEYLRADYRINCKDAAHEAFEVFAGFMIFVYPVGIPLLYAVLLFQRRDVLADAGDD--DKATAKSISGLWEPYRPERFYYEVVECGRRVMLTGVVVFIFPNDAAQIAITLLSAFCFFAIFEMVSPYKSDSDMWLSRGGHVIVFFSMFDLLLRKVDVSDEREESQAVFAGVLVAGHVLMVLAIVVEVVGI 1019 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1311.2336.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1311.2336.1 >prot_F-serratus_M_contig1311.2336.1 ID=prot_F-serratus_M_contig1311.2336.1|Name=mRNA_F-serratus_M_contig1311.2336.1|organism=Fucus serratus male|type=polypeptide|length=1042bp MLVFANNHAALGGAVRVEKSNMSWDGHATFANNTAAGDSSSGPDGGALSCback to top mRNA from alignment at F-serratus_M_contig1311:114146..124963- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1311.2336.1 ID=mRNA_F-serratus_M_contig1311.2336.1|Name=mRNA_F-serratus_M_contig1311.2336.1|organism=Fucus serratus male|type=mRNA|length=10818bp|location=Sequence derived from alignment at F-serratus_M_contig1311:114146..124963- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1311:114146..124963- >mRNA_F-serratus_M_contig1311.2336.1 ID=mRNA_F-serratus_M_contig1311.2336.1|Name=mRNA_F-serratus_M_contig1311.2336.1|organism=Fucus serratus male|type=CDS|length=6252bp|location=Sequence derived from alignment at F-serratus_M_contig1311:114146..124963- (Fucus serratus male)back to top |