prot_F-serratus_M_contig131.2326.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig131.2326.1
Unique Nameprot_F-serratus_M_contig131.2326.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length195
Homology
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A836CNQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNQ4_9STRA)

HSP 1 Score: 120 bits (302), Expect = 3.480e-28
Identity = 69/107 (64.49%), Postives = 84/107 (78.50%), Query Frame = 0
Query:    1 MASTVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAP-KTGGLLAKMK-ALDAAAALQSTATYG 105
            MASTV +KFKSA+D+D V+F+G  I L DLKRAIVEQK LH+GM+FDL IVND+TKEEY +D+  + KN+SVVVKRVPA  K GGLLAK+K A  A+A L S+   G
Sbjct:    1 MASTVHYKFKSAKDFDAVAFSGMVISLFDLKRAIVEQKNLHKGMDFDLAIVNDQTKEEYTDDTQAIPKNTSVVVKRVPAKSKGGGLLAKIKQAARASATLNSSEPVG 107          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: D8LMD4_ECTSI (DWNN domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMD4_ECTSI)

HSP 1 Score: 103 bits (257), Expect = 1.210e-25
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 MASTVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKE 57
            MAS VKFKFKSAR+YD+VSF GTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKT+E
Sbjct:    1 MASMVKFKFKSAREYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A6H5LL05_9PHAE (DWNN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL05_9PHAE)

HSP 1 Score: 103 bits (257), Expect = 3.580e-25
Identity = 52/57 (91.23%), Postives = 55/57 (96.49%), Query Frame = 0
Query:    1 MASTVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKE 57
            MAS VKFKFKSAR+YD+VSF GTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKT+E
Sbjct:    1 MASIVKFKFKSAREYDSVSFPGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTRE 57          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A7S0ZB63_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZB63_9RHOD)

HSP 1 Score: 92.0 bits (227), Expect = 5.730e-20
Identity = 48/88 (54.55%), Postives = 67/88 (76.14%), Query Frame = 0
Query:    1 MASTVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAPKTGGLLAK 88
            MA+ V FKFKSA+DYDTV+F G  +K+ DLK AIVEQKKL  G +FDL I + +T +EY  +S +V +N+SV+V+RVP  + GG+L++
Sbjct:    1 MAAAVHFKFKSAKDYDTVTFDGEYLKVADLKVAIVEQKKLSFGEDFDLQIQDAQTGDEYVNESDLVRRNASVIVRRVPGLRPGGILSQ 88          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A7S3K214_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K214_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.690e-18
Identity = 49/92 (53.26%), Postives = 75/92 (81.52%), Query Frame = 0
Query:    1 MASTVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQG-MEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAP-KTGGLLAKMK 90
            M+ST++F+F S++  DT+SF+G  IKLL+LKRAIVE+++L +G M+FDL I N +T EEYK+D  ++ KN++V+V+RVPA  K GGLL++++
Sbjct:    1 MSSTIQFRFGSSKTMDTISFSGLMIKLLELKRAIVEKRQLIRGHMDFDLQISNVQTGEEYKDDDMMINKNTTVMVRRVPATSKGGGLLSRLE 92          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A2D4BW50_PYTIN (DWNN domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BW50_PYTIN)

HSP 1 Score: 85.9 bits (211), Expect = 4.760e-18
Identity = 45/95 (47.37%), Postives = 74/95 (77.89%), Query Frame = 0
Query:    4 TVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAPKTGG-LLAKMKALDAAAA 97
            ++ FKFK+A+++DTV+F GT I+++DLK+A V++KKL +G++FDL I + +  + Y +++  + +N+SV VKR+P+ + GG LLA+MKA  AAAA
Sbjct:    2 SIHFKFKAAKEFDTVTFPGTVIRVIDLKKAXVDKKKLXKGLDFDLVITDAQNGKVYDDENMQLPRNTSVTVKRIPSQQPGGGLLARMKAEAAAAA 96          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A5D6Y1K7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y1K7_9STRA)

HSP 1 Score: 91.7 bits (226), Expect = 4.870e-18
Identity = 48/95 (50.53%), Postives = 77/95 (81.05%), Query Frame = 0
Query:    4 TVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAPKTG-GLLAKMKALDAAAA 97
            ++ FKFKSA+++DTV+FAGT I++LDLK+AI+E+KKL++G++FDL I + ++ + Y +++  + +N+SV VKR+P+ + G GLLA+MKA   AAA
Sbjct:    2 SIHFKFKSAKEFDTVAFAGTVIRVLDLKKAIIEKKKLNKGLDFDLVITDAQSGKVYDDENMQLPRNTSVTVKRIPSQQPGSGLLARMKAEAMAAA 96          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A024GLF0_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GLF0_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 6.750e-18
Identity = 49/95 (51.58%), Postives = 78/95 (82.11%), Query Frame = 0
Query:    4 TVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAPKTG-GLLAKMKALDAAAA 97
            ++ FKFKSA+D+DTV+F GT I+++DLK+AIVE+KKL++G++FDL I + ++ + Y++++  + +N+SV VKR+P+   G GLLA+MKA +AAAA
Sbjct:    2 SIHFKFKSAKDFDTVNFPGTVIRVIDLKKAIVEKKKLNKGLDFDLVITDAQSGKVYEDENLQLARNTSVTVKRIPSMHPGSGLLARMKA-EAAAA 95          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A1X6P7B6_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7B6_PORUM)

HSP 1 Score: 90.9 bits (224), Expect = 9.040e-18
Identity = 48/88 (54.55%), Postives = 66/88 (75.00%), Query Frame = 0
Query:    1 MASTVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAPKTGGLLAK 88
            M+S V F+FKSARD+DTV+F G  I + DLK  IVE KKL+ G  FDL+I + +T E+Y E++ +V KN+SVVV+RVP  K GG+L++
Sbjct:    1 MSSAVHFRFKSARDFDTVTFDGDFISIADLKVGIVEVKKLNYGEGFDLDISDAQTNEDYSEEAYLVPKNTSVVVRRVPGLKPGGILSQ 88          
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Match: A0A1V9ZWH9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWH9_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.230e-17
Identity = 44/88 (50.00%), Postives = 68/88 (77.27%), Query Frame = 0
Query:    4 TVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNIVNDKTKEEYKEDSAIVTKNSSVVVKRVPAPKTGGLLAKMKA 91
            +V FKFKS +++ TV+F GT I+++DLK+AI+EQKKL++G++ +L I + +    Y++DS  + KN+SV+VKRVPA    GLLA++KA
Sbjct:    2 SVHFKFKSEKEFGTVNFPGTAIRVIDLKKAIIEQKKLNKGLDLELVITDAQNNTVYEDDSLQLPKNTSVIVKRVPAKNNNGLLARLKA 89          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig131.2326.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CNQ4_9STRA3.480e-2864.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LMD4_ECTSI1.210e-2591.23DWNN domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A6H5LL05_9PHAE3.580e-2591.23DWNN domain-containing protein n=1 Tax=Ectocarpus ... [more]
A0A7S0ZB63_9RHOD5.730e-2054.55Hypothetical protein (Fragment) n=1 Tax=Timspurcki... [more]
A0A7S3K214_9STRA4.690e-1853.26Hypothetical protein n=2 Tax=Aureoumbra lagunensis... [more]
A0A2D4BW50_PYTIN4.760e-1847.37DWNN domain-containing protein n=1 Tax=Pythium ins... [more]
A0A5D6Y1K7_9STRA4.870e-1850.53Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A024GLF0_9STRA6.750e-1851.58Uncharacterized protein n=1 Tax=Albugo candida Tax... [more]
A0A1X6P7B6_PORUM9.040e-1854.55Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1V9ZWH9_9STRA1.230e-1750.00Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014891DWNN domainSMARTSM01180DWNN_2coord: 5..78
e-value: 6.1E-32
score: 122.1
IPR014891DWNN domainPFAMPF08783DWNNcoord: 5..78
e-value: 2.3E-28
score: 98.3
IPR014891DWNN domainPROSITEPS51282DWNNcoord: 5..78
score: 27.805
NoneNo IPR availableGENE3D3.10.20.90coord: 1..82
e-value: 1.5E-29
score: 103.5
NoneNo IPR availablePANTHERPTHR15439:SF0E3 UBIQUITIN-PROTEIN LIGASE RBBP6coord: 1..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 134..194
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 91..110
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..133
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 111..115
NoneNo IPR availableTMHMMTMhelixcoord: 139..161
NoneNo IPR availableTMHMMTMhelixcoord: 107..129
IPR033489E3 ubiquitin-protein ligase RBBP6 familyPANTHERPTHR15439RETINOBLASTOMA-BINDING PROTEIN 6coord: 1..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig131contigF-serratus_M_contig131:651140..652494 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig131.2326.1mRNA_F-serratus_M_contig131.2326.1Fucus serratus malemRNAF-serratus_M_contig131 639958..653884 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig131.2326.1 ID=prot_F-serratus_M_contig131.2326.1|Name=mRNA_F-serratus_M_contig131.2326.1|organism=Fucus serratus male|type=polypeptide|length=195bp
MASTVKFKFKSARDYDTVSFAGTGIKLLDLKRAIVEQKKLHQGMEFDLNI
VNDKTKEEYKEDSAIVTKNSSVVVKRVPAPKTGGLLAKMKALDAAAALQS
TATYGVILYLMFFPTFFYHCAIHLQYLFIFSHIHKRANFLHYRHYSCFIF
IFQPFFFTTVPRHQFCLAVKILAGDGKKQQAAVVRLLRDIYIII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014891DWNN_domain
IPR033489RBBP6