mRNA_F-serratus_M_contig131.2324.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A0C2WN23_AMAMK (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Amanita muscaria (strain Koide BX008) TaxID=946122 RepID=A0A0C2WN23_AMAMK) HSP 1 Score: 142 bits (357), Expect = 8.530e-36 Identity = 74/180 (41.11%), Postives = 110/180 (61.11%), Query Frame = 1
Query: 1 KAEETELLGMVENFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLLTKPLD 540
KA E EL + V +V RP+D+ +IG+K ++K K G DG+VEKYK RL+AQGF QVEG+ Y E ++P + SIR+LLA AA D E+ D + AFL +++EEIY+++P + AV RL KA+YGL QA R W K ++ +GF + + ++ D+H ++ +D
Sbjct: 1012 KACEAELEMFKQLGVFEEVPRPRDRKIIGSKWVFKTKTGPDGQVEKYKARLVAQGFSQVEGIDYNETFAPVTKSNSIRLLLALAARHDWEIHQMDVKSAFLNGELEEEIYMKVPPGHKASADAVWRLKKALYGLKQASREWYKKLSAELKTLGFTRLQADHCVFYKNMDRHPPIIAVYVD 1191
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A1C7MSU6_GRIFR (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7MSU6_GRIFR) HSP 1 Score: 131 bits (329), Expect = 4.420e-32 Identity = 69/164 (42.07%), Postives = 101/164 (61.59%), Query Frame = 1
Query: 16 ELLGMVENFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSED 507
ELL V+ + ++V RP+D+ V+G K +++ K G DG++EKYK R++A+GF QVEGV YT+ ++P ASIR LLA AA D E+ D + AFL ++DEEI++ P FQ V +L KA+YGL QA R W K + ++GF + ++ED
Sbjct: 304 ELLTFVKAELYDEVERPRDRKVVGCKWVFRIKRGPDGEIEKYKARVVAKGFTQVEGVDYTDTFAPVTKFASIRALLALAAKLDLEIHQMDVKSAFLNGNLDEEIFMACPPGFQGARNIVWQLRKALYGLKQASREWYKKIRAEFESLGFTRSNADHSVFYKNED 467
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A5E8C1Z7_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1Z7_9ASCO) HSP 1 Score: 127 bits (318), Expect = 1.460e-30 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 37 NFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPE--EFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLL 525
N V V P + +GTK + K+K+ DG ++KYK RL+ QGF Q GV Y + ++P +++R++ A +AAK+ E+ H D + AFL D++E+IYV+ P + PG V +LNK++YGL QA CWN K D + A+G++A K P + + + ++
Sbjct: 608 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKINGKDFSII 772
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A5E8BZM0_9ASCO (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZM0_9ASCO) HSP 1 Score: 127 bits (318), Expect = 1.460e-30 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 37 NFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPE--EFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLL 525
N V V P + +GTK + K+K+ DG ++KYK RL+ QGF Q GV Y + ++P +++R++ A +AAK+ E+ H D + AFL D++E+IYV+ P + PG V +LNK++YGL QA CWN K D + A+G++A K P + + + ++
Sbjct: 921 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKINGKDFSII 1085
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A0C3AKI0_9AGAM (Uncharacterized protein (Fragment) n=1 Tax=Serendipita vermifera MAFF 305830 TaxID=933852 RepID=A0A0C3AKI0_9AGAM) HSP 1 Score: 127 bits (318), Expect = 1.470e-30 Identity = 61/157 (38.85%), Postives = 95/157 (60.51%), Query Frame = 1
Query: 70 DKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLLTKPLD 540
++ ++G++ ++ +K + GKV +YK RL+AQGF Q+ GV YT+ YSP ++R +A +A KD E+R D + A+L +++EEI++E PE F + G V RL +YGL QAGR WN K +T +GF P Y ++D +LT +D
Sbjct: 895 ERKLVGSRWVFAKKYDEHGKVNQYKARLVAQGFSQIPGVDYTDNYSPVVRLDAVRACIALSAIKDWEMRQIDIKGAYLNGELEEEIFMEQPEGFNDGSGRVCRLKLPLYGLKQAGRMWNKKLNAQLTTLGFNRTNADPCVYYNNQDGKITILTVWVD 1051
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A5E8C1N6_9ASCO (Integrase catalytic domain-containing protein n=3 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C1N6_9ASCO) HSP 1 Score: 127 bits (318), Expect = 1.520e-30 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 37 NFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPE--EFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLL 525
N V V P + +GTK + K+K+ DG ++KYK RL+ QGF Q GV Y + ++P +++R++ A +AAK+ E+ H D + AFL D++E+IYV+ P + PG V +LNK++YGL QA CWN K D + A+G++A K P + + + ++
Sbjct: 1901 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKINGKDFSII 2065
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A5E8C8U5_9ASCO (Uncharacterized protein n=2 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8C8U5_9ASCO) HSP 1 Score: 127 bits (318), Expect = 1.540e-30 Identity = 62/165 (37.58%), Postives = 99/165 (60.00%), Query Frame = 1
Query: 37 NFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPE--EFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQHADLL 525
N V V P + +GTK + K+K+ DG ++KYK RL+ QGF Q GV Y + ++P +++R++ A +AAK+ E+ H D + AFL D++E+IYV+ P + PG V +LNK++YGL QA CWN K D + A+G++A K P + + + ++
Sbjct: 2393 NHVYQVVPLPAGRKALGTKWVLKKKLNTDGSIDKYKARLVVQGFRQKFGVDYVDTFAPVMRFSTVRLIFALSAAKNCEMHHVDVKNAFLNGDLEEDIYVKPPTGIDHNTPPGMVWKLNKSLYGLKQAPLCWNKKLVDKLEALGYKAAKKEPCLFYKINGKDFSII 2557
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A2R6NZJ8_9APHY (Integrase catalytic domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A2R6NZJ8_9APHY) HSP 1 Score: 126 bits (317), Expect = 1.990e-30 Identity = 67/170 (39.41%), Postives = 98/170 (57.65%), Query Frame = 1
Query: 4 AEETELLGMVENFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQH 513
AE E+ V+ + +V +PK + ++ K +Y K G DG+V KYK RL+A+GF Q+EGV Y E ++P SIR LLA AA + E+ D + AFL D++EEIY++ P F+ G V +LNK++YGL QA R W + C + +GF + + ED H
Sbjct: 987 AEIAEIEAFVKAKLFTEVNKPKGRRLVDCKWVYTIKRGPDGEVIKYKARLVARGFTQIEGVDYNETFAPVSKFTSIRSLLALAAVHNLEIHQMDVKSAFLNGDLNEEIYMQCPPGFKAKDGNVWKLNKSLYGLKQASREWYKRVCAEFKTMGFTRSDHDHAIFFKYEDGH 1156
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A4S4KBB0_9APHY (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hermanssonia centrifuga TaxID=98765 RepID=A0A4S4KBB0_9APHY) HSP 1 Score: 123 bits (309), Expect = 3.630e-30 Identity = 66/170 (38.82%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 4 AEETELLGMVENFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSEDQH 513
AE E+ V+ + +V +PK + ++ K +Y K G DG+V KYK RL+A+GF Q+EGV Y E ++P SIR LLA AA + E+ D + AFL D++EEIY++ P F+ G V +LNK++YGL QA W + C + +GF + + ED H
Sbjct: 163 AEIAEIEAFVKAKLFTEVNKPKGRRLVDCKWVYTIKRGPDGEVIKYKARLVARGFTQIEGVDYNETFAPVSKFTSIRSLLALAAVHNLEIHQMDVKSAFLNGDLNEEIYMQCPPGFKAKDGNVWKLNKSLYGLKQASCEWYKRVCAEFKTMGFTRSDHDHAIFFKYEDGH 332
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Match: A0A6H5FUQ5_9HEMI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Nesidiocoris tenuis TaxID=355587 RepID=A0A6H5FUQ5_9HEMI) HSP 1 Score: 125 bits (314), Expect = 4.660e-30 Identity = 62/169 (36.69%), Postives = 101/169 (59.76%), Query Frame = 1
Query: 1 KAEETELLGMVENFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVEGVHYTEKYSPTPPTASIRMLLATAAAKDGELRHFDAEQAFLKADIDEEIYVEIPEEFQEFPGAVGRLNKAIYGLVQAGRCWNNKFCDDMTAIGFEAGKGGPVPYVRSED 507
+A ++E+ + EN PK K I + ++ K+ DG ++KYK R++A+GF Q +G Y E +SP + +IR +L+ AAA++ + FD AFL ++DE IY++ P+ F + G V RL +++YGL QA RCWN +F D ++ IG A + P ++R +D
Sbjct: 349 RAMDSEIKSLKENNTWRLEHLPKGKKAIPCRWTFRVKLNPDGSIDKYKARVVAKGFTQKKGSDYDEVFSPVARSGTIRAVLSVAAAENLHMMQFDVSTAFLYGNLDETIYMQQPDGFNDETGRVCRLTRSLYGLKQAPRCWNKRFVDYLSKIGLHASEADPCLFIREKD 517 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig131.2324.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig131.2324.1 >prot_F-serratus_M_contig131.2324.1 ID=prot_F-serratus_M_contig131.2324.1|Name=mRNA_F-serratus_M_contig131.2324.1|organism=Fucus serratus male|type=polypeptide|length=171bp MVENFVCNQVTRPKDKLVIGTKMLYKRKIGQDGKVEKYKCRLLAQGFWQVback to top mRNA from alignment at F-serratus_M_contig131:582519..583972+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig131.2324.1 ID=mRNA_F-serratus_M_contig131.2324.1|Name=mRNA_F-serratus_M_contig131.2324.1|organism=Fucus serratus male|type=mRNA|length=1454bp|location=Sequence derived from alignment at F-serratus_M_contig131:582519..583972+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig131:582519..583972+ >mRNA_F-serratus_M_contig131.2324.1 ID=mRNA_F-serratus_M_contig131.2324.1|Name=mRNA_F-serratus_M_contig131.2324.1|organism=Fucus serratus male|type=CDS|length=1026bp|location=Sequence derived from alignment at F-serratus_M_contig131:582519..583972+ (Fucus serratus male)back to top |