prot_F-serratus_M_contig1308.2308.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1308.2308.1
Unique Nameprot_F-serratus_M_contig1308.2308.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length469
Homology
BLAST of mRNA_F-serratus_M_contig1308.2308.1 vs. uniprot
Match: D7FM87_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM87_ECTSI)

HSP 1 Score: 243 bits (621), Expect = 1.930e-71
Identity = 205/509 (40.28%), Postives = 253/509 (49.71%), Query Frame = 0
Query:    1 MASIDSEIMQQVAAARVEPPSSTGAIAPAPSNPPLSNGKLSTQAQVYVANKVATSPFCDMLQRRRSESIVHNGEWNSHFGGVGITDASESCLRLLRSHPSEFLRRYGHILSPIDLEALVPSLDPEVALHAKRLQTLMSKQRQESPASEQAAAMVAHPENRGTGRGYRNDRQGKRSCPADG---------------------ARVRNRRYRRLQQLDERGVWFSDEAMKERDPWLWYECVGRWAGEEEPAPRDATDQVPGSTSVRTYLQESLGFLSQAQV-GNWPTETTLGATSRGRGPC--------FGMAFLNGCATGAIGREQTMDEEPQEKLGSDDAPD--SSQSQTTPSPGVGRLPD-------DASSGGNTAEVVAAVAAIRIRDGSEGDAGGAGKEDRPDGVRRDRRVTFAEGTADEG-----QDQNVPDAGDVQVEEEDNXXXXXXXXXXXXEVARVLWERFLDGEEEDVNYTDVDGDERLDDLDQIDRDEEDRWFGGQEDD 465
            M S+  E+ QQ     V+PP         P +P   + +  + AQ+ VA+KVA SPFC++L    + S                 +A+E+CL+LL   P EFL R+GHIL+P DLE+L+PS DP VALH  RL+TLM  Q                                                             ARVRNRRYRRLQQL E GVWFSDEAMKERDPWLW+E VG+ AGEE+PAP+ A ++VPGSTSV TYLQESLGFLSQ Q  G WPT         G             GMAFL+G    A  R+    E     + S D P+  SSQ++ T  P    +PD       +       A V AAV AI ++D         GK+   DG    RRV F++    +G                       XXXXXXXXX   EVAR+L ERFL G E+ V+Y  VDGDERLDDLDQ+ RDE+DRWF G+E+D
Sbjct:   21 MDSLADEVTQQAEDDTVQPP---------PWSP---SSQQPSPAQLEVADKVAASPFCNVLPPATTSSSA---------------EAAEACLKLLLHQPGEFLSRFGHILTPGDLESLLPSQDPAVALHVARLKTLMLSQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXARVRNRRYRRLQQLAEGGVWFSDEAMKERDPWLWFEYVGKHAGEEKPAPKQAVEEVPGSTSVGTYLQESLGFLSQKQPNGGWPTGLPTSGAGAGXXXXXXXXXXTSLGMAFLSGVCADAGARDVAAGE----TVDSSDVPEAASSQAEVTAVPIASGMPDGRERHACEDDVDARAAAVTAAVGAIGLQDD--------GKKADVDG----RRVRFSDEMGSDGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGREEVARILSERFLAGLEQGVDYRSVDGDERLDDLDQLSRDEQDRWFLGEEED 486          
BLAST of mRNA_F-serratus_M_contig1308.2308.1 vs. uniprot
Match: F2TWH5_SALR5 (DUF2052 domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2TWH5_SALR5)

HSP 1 Score: 64.7 bits (156), Expect = 7.290e-8
Identity = 39/88 (44.32%), Postives = 50/88 (56.82%), Query Frame = 0
Query:  183 VRNRRYRRLQQLDERGVWFSDEAMKERDPWLWYECVGRWAGEEEPAPRDAT------DQVPGSTSVRTYLQESLGFLSQAQVGNWPTE 264
            VRNRRYRR+QQL + G +FS+EAMKER PWL+ + VGR+  + E   R  T      DQ+   T V     E L    QA + +W  E
Sbjct:   91 VRNRRYRRMQQLLQEGTFFSEEAMKERCPWLYDQFVGRYLSDAEVEQRVQTVTQCWSDQLLAHT-VGQRTTERLHLEQQAALASWEEE 177          
BLAST of mRNA_F-serratus_M_contig1308.2308.1 vs. uniprot
Match: A0A1D1YCT0_9ARAE (Coiled-coil domain-containing protein 97 (Fragment) n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1YCT0_9ARAE)

HSP 1 Score: 56.6 bits (135), Expect = 1.920e-5
Identity = 55/182 (30.22%), Postives = 81/182 (44.51%), Query Frame = 0
Query:   81 GVGITDAS---ESCLRLLRSHPSEFLRRYGHILSPIDLEAL-VPSLDPEVALHAKRLQTLMSKQRQESPASEQAAAMVAHPENRGTGRGYRNDRQGKRSCPADGARVRNRRYRRLQQLDERGVWFSDEAMKERDPWLWYECVGRWAGEEEPAPRDATDQVPGSTSVRTYLQESLGFLSQAQV 258
            G    DAS    + L LL    S FL RYG  L+  +L        D EV  H  R++      R  SP +E+A +  A                           V+NRR   L+QL + GV+FS+EAM+ER+P+L +E VGR+   ++P  R  +   PG     T ++ S   +  A++
Sbjct:   59 GEAPPDASLRKTALLDLLSRDASLFLERYGTDLTAAELSEFDALKQDYEVCWHLDRIR------RSRSPTAEEARSRSAT--------------------------VKNRRRAYLEQLVQGGVYFSEEAMREREPYLHHEYVGRF---QDPGGRGMSR--PGERWSETLMRRSEEAILMAKI 203          
BLAST of mRNA_F-serratus_M_contig1308.2308.1 vs. uniprot
Match: A0A0D9WLK8_9ORYZ (DUF2052 domain-containing protein n=1 Tax=Leersia perrieri TaxID=77586 RepID=A0A0D9WLK8_9ORYZ)

HSP 1 Score: 56.6 bits (135), Expect = 3.650e-5
Identity = 43/137 (31.39%), Postives = 60/137 (43.80%), Query Frame = 0
Query:   86 DASESCLRLLRSHPSEFLRRYGHILSPIDLEALVP-SLDPEVALHAKRLQTLMSKQRQESPASEQAAAMVAHPENRGTGRGYRNDRQGKRSCPADGARVRNRRYRRLQQLDERGVWFSDEAMKERDPWLWYECVGRW 221
            D   + L LL      FL RYG  L+P +L A  P + D EV  H +RL++  S                                      P   +RVRNRR   L +L   G +FS+EAM+ER+P+L +E +GR+
Sbjct:   36 DRKATLLALLARDAPLFLERYGESLTPSELAAFDPLAADYEVGWHLRRLRSAAS--------------------------------------PPGASRVRNRRRAYLDRLVREGDYFSEEAMREREPYLHHEYLGRF 134          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1308.2308.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D7FM87_ECTSI1.930e-7140.28Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F2TWH5_SALR57.290e-844.32DUF2052 domain-containing protein n=1 Tax=Salpingo... [more]
A0A1D1YCT0_9ARAE1.920e-530.22Coiled-coil domain-containing protein 97 (Fragment... [more]
A0A0D9WLK8_9ORYZ3.650e-531.39DUF2052 domain-containing protein n=1 Tax=Leersia ... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 396..416
IPR040233Domain of unknown function DUF2052PFAMPF09747DUF2052coord: 185..459
e-value: 1.0E-31
score: 110.7
IPR018613Ccdc97-likePANTHERPTHR31840FAMILY NOT NAMEDcoord: 91..465

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1308contigF-serratus_M_contig1308:191206..193946 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1308.2308.1mRNA_F-serratus_M_contig1308.2308.1Fucus serratus malemRNAF-serratus_M_contig1308 191176..194106 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1308.2308.1 ID=prot_F-serratus_M_contig1308.2308.1|Name=mRNA_F-serratus_M_contig1308.2308.1|organism=Fucus serratus male|type=polypeptide|length=469bp
MASIDSEIMQQVAAARVEPPSSTGAIAPAPSNPPLSNGKLSTQAQVYVAN
KVATSPFCDMLQRRRSESIVHNGEWNSHFGGVGITDASESCLRLLRSHPS
EFLRRYGHILSPIDLEALVPSLDPEVALHAKRLQTLMSKQRQESPASEQA
AAMVAHPENRGTGRGYRNDRQGKRSCPADGARVRNRRYRRLQQLDERGVW
FSDEAMKERDPWLWYECVGRWAGEEEPAPRDATDQVPGSTSVRTYLQESL
GFLSQAQVGNWPTETTLGATSRGRGPCFGMAFLNGCATGAIGREQTMDEE
PQEKLGSDDAPDSSQSQTTPSPGVGRLPDDASSGGNTAEVVAAVAAIRIR
DGSEGDAGGAGKEDRPDGVRRDRRVTFAEGTADEGQDQNVPDAGDVQVEE
EDNEEEEGNREEGREEVARVLWERFLDGEEEDVNYTDVDGDERLDDLDQI
DRDEEDRWFGGQEDDTVG*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040233DUF2052
IPR018613Ccdc97-like