prot_F-serratus_M_contig1307.2303.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig1307.2303.1
Unique Nameprot_F-serratus_M_contig1307.2303.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length73
Homology
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: D7FRF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF4_ECTSI)

HSP 1 Score: 106 bits (265), Expect = 7.380e-29
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 0
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVDGAIKYISAPAPRFFPEGSFKFQEASEDDD 69
            MVF GQDAWRKHPMLTGCYKR FPG  IA+G+FAGYCV+DG IK+ +AP    +  G+FKF+   EDD+
Sbjct:    1 MVFGGQDAWRKHPMLTGCYKRPFPGLGIALGLFAGYCVLDGTIKFATAPTKDLYAPGTFKFEAQGEDDE 69          
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: A0A662XPS6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPS6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 6.080e-11
Identity = 31/66 (46.97%), Postives = 36/66 (54.55%), Query Frame = 0
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVDGAIKYISAPAPR----FFPEGSFKFQ 62
            MV A QDAWRKHP +TGC K+ F G  +A  IF  Y VVD      S   P     + P G FKF+
Sbjct:    1 MVLAHQDAWRKHPFITGCGKKPFTGLGMASAIFGVYLVVDLITSRSSPHDPHPQMDYIPRGKFKFE 66          
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: A0A1V9Y7Y0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7Y0_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 2.290e-10
Identity = 26/40 (65.00%), Postives = 29/40 (72.50%), Query Frame = 0
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVD 40
            MV A QDAWRKHP L+ C K+ FPG  IA GIF+ Y VVD
Sbjct:    1 MVLAHQDAWRKHPFLSNCSKKPFPGLGIAAGIFSVYLVVD 40          
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: K3WAK3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAK3_GLOUD)

HSP 1 Score: 59.3 bits (142), Expect = 5.470e-10
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 0
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVD 40
            MV A QDAWRKHP ++GC K+ FPG  IA  IF  Y VVD
Sbjct:    1 MVLAHQDAWRKHPFISGCAKKPFPGLGIASAIFGAYLVVD 40          
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: A0A2D4BKS1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKS1_PYTIN)

HSP 1 Score: 52.8 bits (125), Expect = 2.120e-7
Identity = 23/40 (57.50%), Postives = 25/40 (62.50%), Query Frame = 0
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVD 40
            MV A QDAWRKHP +TGC K+ F G   A  IF  Y V D
Sbjct:    1 MVLAHQDAWRKHPFITGCAKKPFTGLGTASAIFGVYLVFD 40          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FRF4_ECTSI7.380e-2965.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662XPS6_9STRA6.080e-1146.97Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1V9Y7Y0_9STRA2.290e-1065.00Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
K3WAK3_GLOUD5.470e-1062.50Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BKS1_PYTIN2.120e-757.50Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3PFAMPF08122NDUF_B12coord: 7..42
e-value: 2.2E-5
score: 24.4
IPR012576NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 3PANTHERPTHR15082NADH-UBIQUINONE OXIDOREDUCTASE B12 SUBUNITcoord: 3..50
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1307contigF-serratus_M_contig1307:175216..183977 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1307.2303.1mRNA_F-serratus_M_contig1307.2303.1Fucus serratus malemRNAF-serratus_M_contig1307 175216..184689 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig1307.2303.1 ID=prot_F-serratus_M_contig1307.2303.1|Name=mRNA_F-serratus_M_contig1307.2303.1|organism=Fucus serratus male|type=polypeptide|length=73bp
MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVDGAIKYISAPA
PRFFPEGSFKFQEASEDDDDDE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012576NDUFB3