mRNA_F-serratus_M_contig1307.2303.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1307.2303.1
Unique NamemRNA_F-serratus_M_contig1307.2303.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: D7FRF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF4_ECTSI)

HSP 1 Score: 107 bits (267), Expect = 5.340e-26
Identity = 45/69 (65.22%), Postives = 54/69 (78.26%), Query Frame = 1 
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVDGAIKYISAPAPRFFPEGSFKFQEASEDDD 207
            MVF GQDAWRKHPMLTGCYKR FPG  IA+G+FAGYCV+DG IK+ +AP    +  G+FKF+   EDD+
Sbjct:    1 MVFGGQDAWRKHPMLTGCYKRPFPGLGIALGLFAGYCVLDGTIKFATAPTKDLYAPGTFKFEAQGEDDE 69
[Close]
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: A0A662XPS6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPS6_9STRA)

HSP 1 Score: 62.0 bits (149), Expect = 6.280e-9
Identity = 31/68 (45.59%), Postives = 37/68 (54.41%), Query Frame = 1 
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVDGAIKYISAPAPR----FFPEGSFKFQEA 192
            MV A QDAWRKHP +TGC K+ F G  +A  IF  Y VVD      S   P     + P G FKF+ +
Sbjct:    1 MVLAHQDAWRKHPFITGCGKKPFTGLGMASAIFGVYLVVDLITSRSSPHDPHPQMDYIPRGKFKFERS 68
[Close]
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: A0A1V9Y7Y0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7Y0_9STRA)

HSP 1 Score: 60.8 bits (146), Expect = 1.520e-8
Identity = 33/67 (49.25%), Postives = 38/67 (56.72%), Query Frame = 1 
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVDGAIKYISAPAPRFFPEGSFKFQEASED 201
            MV A QDAWRKHP L+ C K+ FPG  IA GIF+ Y VVD      S+ A      GS KF    E+
Sbjct:    1 MVLAHQDAWRKHPFLSNCSKKPFPGLGIAAGIFSVYLVVDAVTGGSSSHAHGH--GGSSKFTYVKEE 65
[Close]
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: K3WAK3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAK3_GLOUD)

HSP 1 Score: 59.3 bits (142), Expect = 6.510e-8
Identity = 25/40 (62.50%), Postives = 28/40 (70.00%), Query Frame = 1 
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVD 120
            MV A QDAWRKHP ++GC K+ FPG  IA  IF  Y VVD
Sbjct:    1 MVLAHQDAWRKHPFISGCAKKPFPGLGIASAIFGAYLVVD 40
[Close]
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Match: A0A2D4BKS1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKS1_PYTIN)

HSP 1 Score: 52.8 bits (125), Expect = 1.460e-5
Identity = 23/40 (57.50%), Postives = 25/40 (62.50%), Query Frame = 1 
Query:    1 MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVD 120
            MV A QDAWRKHP +TGC K+ F G   A  IF  Y V D
Sbjct:    1 MVLAHQDAWRKHPFITGCAKKPFTGLGTASAIFGVYLVFD 40
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1307.2303.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FRF4_ECTSI5.340e-2665.22Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662XPS6_9STRA6.280e-945.59Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A1V9Y7Y0_9STRA1.520e-849.25Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
K3WAK3_GLOUD6.510e-862.50Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A2D4BKS1_PYTIN1.460e-557.50Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1307contigF-serratus_M_contig1307:175216..184689 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score107.1
Seed ortholog evalue3.6e-21
Seed eggNOG ortholog2880.D7FRF4
Hectar predicted targeting categoryother localisation
EggNOG OGs2E7JH@1,2SE52@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_000750.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size931
Cds size219
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1307.2303.1prot_F-serratus_M_contig1307.2303.1Fucus serratus malepolypeptideF-serratus_M_contig1307 175216..183977 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929264.3235254-CDS-F-serratus_M_contig1307:175215..1753571622929264.3235254-CDS-F-serratus_M_contig1307:175215..175357Fucus serratus maleCDSF-serratus_M_contig1307 175216..175357 +
1690962774.9256501-CDS-F-serratus_M_contig1307:175215..1753571690962774.9256501-CDS-F-serratus_M_contig1307:175215..175357Fucus serratus maleCDSF-serratus_M_contig1307 175216..175357 +
1622929264.34145-CDS-F-serratus_M_contig1307:183900..1839771622929264.34145-CDS-F-serratus_M_contig1307:183900..183977Fucus serratus maleCDSF-serratus_M_contig1307 183901..183977 +
1690962774.9417417-CDS-F-serratus_M_contig1307:183900..1839771690962774.9417417-CDS-F-serratus_M_contig1307:183900..183977Fucus serratus maleCDSF-serratus_M_contig1307 183901..183977 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929264.355941-UTR-F-serratus_M_contig1307:183977..1846891622929264.355941-UTR-F-serratus_M_contig1307:183977..184689Fucus serratus maleUTRF-serratus_M_contig1307 183978..184689 +
1690962774.9520864-UTR-F-serratus_M_contig1307:183977..1846891690962774.9520864-UTR-F-serratus_M_contig1307:183977..184689Fucus serratus maleUTRF-serratus_M_contig1307 183978..184689 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1307.2303.1

>prot_F-serratus_M_contig1307.2303.1 ID=prot_F-serratus_M_contig1307.2303.1|Name=mRNA_F-serratus_M_contig1307.2303.1|organism=Fucus serratus male|type=polypeptide|length=73bp
MVFAGQDAWRKHPMLTGCYKRAFPGFRIAVGIFAGYCVVDGAIKYISAPA
PRFFPEGSFKFQEASEDDDDDE*
back to top

mRNA from alignment at F-serratus_M_contig1307:175216..184689+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1307.2303.1 ID=mRNA_F-serratus_M_contig1307.2303.1|Name=mRNA_F-serratus_M_contig1307.2303.1|organism=Fucus serratus male|type=mRNA|length=9474bp|location=Sequence derived from alignment at F-serratus_M_contig1307:175216..184689+ (Fucus serratus male)
ATGGTGTTTGCCGGTCAGGATGCGTGGCGAAAGCACCCGATGCTCACGGG
TTGCTACAAACGGGCCTTCCCGGGGTTCAGGATCGCGGTAGGCATCTTCG
CGGGTTACTGCGTTGTCGACGGGGCTATCAAGTACATCAGCGGTGAGTAC
GAGCTACGAATGCTGCTCTTGGCATGTGGGTAGGTACGGCGAACGTCAAG
GTTCTTTGATGGACATTACAAATACCTCCCAAACGTTGAAAGTGGCAAGC
AATCCGTCGCCTTCTCGCGTACAAATTCCCTTGGGGAGCTCCCAACCAAT
CTACGACAGGGTGTACTATAGGATGTACTATGTACACTCTGTTTTATCTT
ACCTTCTACAGGCAGAACAAGGTGTACAATGCAGCAGTATAATAGTACAC
ATATGTTTCTTCCCGAGTAGATACTGACTCTTGTATAGAACTTGTATGAC
CACGATTCATAAGTACATAACCACTTGTAGACGTGTCAGATCAACGGCAC
CTTCGTTTTCACTGCCTCCCTCCTCCATGATTATAGATCTATAGAGCTAT
CTATGATGCCGTAACAGCAATCATTCTACTCTAGGCTACTCCAAGCTGTT
ATGTTACAACATATTTATACTGTAGAAACAGAAAGGCCTATTATTATATA
CTGTAACGTAATATGATTAGCTACGGCACACCACTGTGTGTGTGTGTGTT
TTCTTCCCATCCATTCTGGACATCAAGTTTGTTGGACGTaccagcCGGGG
TCACACAGGAGGAAGGTCACACAGGATTTCTCATCCACCTTCCTTCTGCG
GTGCGTGCCTTAATTTTTATCGCGAGAAGGATTCAGCCGTTCCTTTCCCT
CGGCGACCGTGAATTCGAATTTTGTGTACTAACGAATTCATCGTTCTCCA
CCCGGTGGGCATTTTTATTTTAGTTTTTAGTATTTTGGTGAGAAAAATTC
CGTTTGCCGGGATCGAACTCACCTCCCAACGTGTCAGAAGGTTACGAGGT
ACCTCTGAGCTACCGGGGCGACCGGCTATTTTACATCATCTTTATACTGT
AGGAACAGAAAGGCCTATATATTATTATATGCTGTACCTAATATGATTAG
CTACGGCACCACTGTCTTATTTGTATTACGAGCTGAACATCTTGGTTTTG
ATACTAATAGTTGGTCCTCCCCTCTATTACAGGGTAAGAGCCTCATTGGC
GAATCAGAACGCACCTAGACCTTCTGAGCATACCCCGGTTAGGGGGTAGA
AAATGTCAAAACGATGAGGTGGAATCAATGGCTGCAATTACAAAACGTCT
TCATGGCATTTCAACGGGTTCCCCCATGCAAATAACATTGGGTCAACAGT
ATAATGTCGGGGAGAAGCCCACCGTTATACTGTACATCTGCATTAATCGC
CATGCAGAGACACCAGAAAATCATTAAAAACAAACCAGAGACAATGTAGT
ACACCATCACACATGGTAGTAGTAATATACATTACATAGGCTATAAATAC
AAAGCCATTACATAGTATTTAATCGGGTTCCCCAATGGTAGTAACCTTGG
GTCGACAGTATAATGTCGGGGAGAACACATATGAATAACCACTATCCGCA
GAGAGGCTGAGAGGGCCATAAGCCACACTGTACCAGTATGCCACCCCTTC
ACCGAAGTCATGGGCGTCCAGCACTACGGATCTTACCAAGCATTGCTCTT
GGGCGCGCGTTGGTCGCTTGTCGTGTTTAAAGAAAAATCTGAATGCACCT
AAACCATCTGATCCGCCCCCGGTAGGGGGAAAAAAATCAAAACGTTTAGG
TGGGATCAAAGGCTGCAGATACAAAACCTCTTCATGGCATTTAAACGGGT
TCCCCAATGCAGATAACATTGGGTCAACAGTATAATGTCGGGGAGAAACC
CACCGTTATACTCTACTCTTACATTAATCGCCATGCAGGGACACCAGAAA
AACAGCAAAGACAAAACAGTACATCATCAAACAATTATTTTTTCCCGTTC
AGTTAACCACGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTCTG
CTATATGTGATGACCATACCATACATACATATACACTCTTCCCCGCTCAC
TTCCTAGGCCGTCTTGTGTGGTCATACATATAGCAAGTTTATGGATCAAC
CGGGTAAGGTTGACAGTCTTGCACGTGGTCAGCTGGACAGGGAAATGAAA
ATTTCCCTGTCCGCGTTCGCGCCTGAGAATTTGGTCTCGCGAGACGGGTC
CGGCAGTCCCGTCCCGCGTCAGTCTACTCATCTCCATACTCAGGCTGAAT
CTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGGCGTCCAATT
ATTCATTTAAAACATCATACGCCATTGGGCCAGTCCCGAGTTTATCGGGT
CACGCATTTACGTACTGATGGCGTTCACTGCCGAGAGTCCGCCGGCACAG
GGCCAGTGATCTTCAAGGTAGTTGCGAACGAGTGCTGCCTTGGCAGGTCA
CCGTGGGCCAATTTATATGCGCCTCTCTTTCCCACACCCACTATTGGCAT
GAAGTGGGCATATTGAAAGTACCGACGATTTGTCCAGTGCGGGCTGAAAA
AGGCAAGTCGCTAAAAATGAAACCGCCATTTTTCATGAGCCCATTTTTTA
CGCGCGCCCGCTGAAAAATGAGCCCCTATTTTTTGAGCGATTCCCAACCA
ATTTTTAATATAATTGGGCGCTGAAAGACGATTTTTTTAACTGGCGATGT
ATTCCTTGGGGTAGCTTCTGTTGATGCTTCAAACCATGAATACATGTATC
TGGGACCCAGGGAGTTAATAGTACGGTTCCTGCAGGTATTCATTATTAAC
AATTATTAACAATACTTGGGCAGTATTATAGTGCTACAGCGCCACCCTTC
CATGGCTGGCTACTTTTGATTTTTTGCAGCTCATGCTTGTAGAGTTGGTT
AACTCCAGCAGCAAACAACAACACCCGAGCAAATAGTATCATAGAGAGAT
TAGCCATTCCCGTAGACCTATTATTATATGTAGCTGCTTTTACCCCCCCC
CCTAGAGCGAGAGAGCCACCGCGACGAGGCACCCATCGGCCCGCGCGCGA
GATTTGTATGTGATCTCGCCCCAACTTACTCATAACCAAAGCGTGTGGTG
TTGAATGCTCCGTGCTGAAGCGCTGCAACGTGGGACCCATAGCTAATATA
ATACTAGTAATAGTGTGTTCTGAGATAAAGTCGCCACTGGGCAGGATGTG
ATTTTCTTTTATATTTAATATTAATGCCACAAACGACGCAGTCGGCGCCA
TAGCTACTTCACTTCAACACCAATTTCAATTTTAGGTCGCCCATCTACGA
GATGGTCTTTTTACGGTTACAGTAGCACAAAAACCAGGACTGTTTTTTGT
TTTCTTTGAAGTGTGCCCCAAAAATCTGGGAAAAAAAATATCTGCGAGTT
TTTTCGCGCACTTGTATGGTCACACATATAGCAAGAGTATGAATCAACCG
GGTAAGGTTGCCAATCCTGCTCGTGGTCAGCTGAACAGGGAAAATGAATA
TTCCCCTGTCCCGCGTTCGTGCCTAATAATTTGGTCTCGCGAGACTGTTT
CGGCAGTCCCGTCCCGCATCAGCCTGCTCATCTCCATACTCAGGCTGAAT
CTGGTGCTTACTCACGGGATTATTCCCGAGTTCCGCGGCGGCGTCCATAA
ATTTGTTTTAAACCGACATACGCCATCGGGTCAGTCCCAAGTTTATCGGG
TGACGCAATTGCGTACCGATGGCGTTCTCTGCCGAGAGTCCGCCGGCACA
GGGCCAGTAAACCCCAAGATAGTTCCGAACGAGTGCTGCCTCTCTTTCCC
ACACCCACTGTTGGTATGAAGTGGGCATGTTGAAAGTACCGGCAACTTGT
AATGGTGTCATCAAGAAGTTGTACCAAAAAAATGTTGAAAGGAATTTTAA
GGAAGCCGAAGAAACAACCCCGACGATGATGATTGGATGATGGATGGTTG
GGTTTTGTATAGAGCTAGGGGCAACATGGGGAAGAGTGCGTTAATGCCAG
CGAACAGCTGCTCGACCTCGACTAAGATGGTGCTGTGTCCGCTTGTGTCT
TGCGGCACCTCTACGAACTCTGCTTCTGTGTTATACCTGGTATATATTTA
TATTATGTCGACTGAGAGGATAGTCACATGCCCATCCCGAGCTGCTTGTC
GTGTTTTGGGCATGTACAGTAGAAGGAGAACGTTCACCTTGATCCTTGAT
CGTTGATACCGGTGAAGAGCCTAACCTTCGCTGACTAAAAGGGGTCTGCA
TTTGCCCGAATGTAAAAAAAAAGGTATATATATATAGACAGGTTCTTGCC
TTCCTCCTTTCGACGTATTGGGTGCGGCGATCCCACCACGCCTCGACTTC
TCCGTCGTCGACACCGTCGCTTACTCGCGTGTGCCCTCCGAACATTCCTC
CTCTCCTCGCTTCGGGATAGATATAGATATAGATATATATATTATCAGGT
ATATATATGTATATTCATATCACTTATAGCCGATGGGTCTCATTCCATCC
TGCCTGTGGTCACTGAGGATCTTCCCGTCTCTCCCCGGTTCACCCCTTTC
GAATTTTTATCGCGATGCAAGTTCAGCACTCTTTACAGCTCGTCAGTCAA
TGGTTGAATTTTACCTACTCACGTTCTCTCTCACGCTTTCCGCTACGGAA
GCACAGCAAGAATTAAAAAATCCTGATTTAGCCAAGAATCAAACTTACGA
CCTCCGCACTATTAAGAGCAGGTGTGCAGGTTATCTATTATTAGTAGACC
ACTCGGGCGATACATATATActtagaagtatatgTATTccagtgtatacA
CTGTATCGCACTGATCTTTTTTGCCTCTTATTTGTAGAACCCTTAACAAC
CACTGTACCCTTTAATTCAAAAGTTGTAACGAAGAACCATAACTCTGATT
TTGCGAAGACCACACAAAAAAATACTACTGCTGCGAGTACAACAAAACGG
GTTCGGGTTAATAATATCTTAGTTTAGTTTAACCTGTTACTATTTTGTAA
GACAGCAGAGTACATTACCACACAAAACCGTATTCGAACATTTCATGGAC
ATATTTTGTATTATATTCTATGCAAGTGTTTATTTTAGTGAGCTACAGTA
TTTTATTTTGTCTACTATTTTAGTGTTAGTAACTACCCTATCACACAAGA
GTCCCCTGTGCTCTCATCATCCATGCTGTATTGTGGAAACCCCTAGTACG
AGGGGGATGACAGGGAAGGGACTAATAATATGAATATTAATATTAATAGC
TGGAGGTGGTTTTTATTTCTACAAAGCTAGACTTCCTCTCGTACCCATTA
TGGAACAAGCAAAGAAAAAAACGTACTCTGTGTAAACGCCAGCGGACAAC
AGCCATCAGCTCCGACCTCAAAAGAAATGATTGATGCAGCGTCCGATTAT
GTACACTGCTACGCCTCTTTGAGTAACAGTAACAATGGTAAGAATCGGAC
GATTGGAACGGTCGTCGGATGCTCTCAGTGGACTGCTTCGTGACACGACT
CTCGTAATACAGGTGTATGATATAGTGCTATTCGTGTTTGGGAATACCCA
CGACCCGCCGTGTAGGAGATTCCCAGTCCCACGGGCGCCGCCCCGGTGGT
TCTTCAGTTGGTAATAATAACCTCGAAACCTTCTGACGTTGGGACGTGAG
TTCGAATCTCGGTGCAGTCACACGAACTGGGTTTTTGGTTTTTGCAACAA
GTAATAACGGTTTTTATGGGAACAAAATCTCGTACAAAAATTTTGATCTT
ACACGAAGATTTTCCTTCCCAACAAGATTTTGTTTCACTTTTTTATGGGA
ACAAAATTTTGTACAAAAATCTTCCAAGATTTTCAGATGGCCGGAAACGT
GCTCTCTTGGCAAAATGCTAGCCCGAGATTTTCAAATGGCGGCTGTCACG
AATATCTTGGTGCGGCGGTGCGGCGAGACAAAACAATTGCGCCGCTTCTT
TCCTTGGGGGATATTTTCTTTAAAAAACACTTATTTAAAACACAAAAACG
CACACGGCGATTGCGATGCAGCGATAGCCAAAGCTGCTGCCGCTGTGAAC
CATGTACAGAGAGCCTGAGTCCGGAGGTTGGTTCTGGGGATGAGGGCTTG
GGCTTGATTGGTTTCAATTTATCATGAGCAGAAACGGGCTTTTGGTGGCA
AGAGGAGGAATCGGAGCCAATACATGACATGACACGACCTGGGGACTTGG
CTTCAGATAAAGCTGGAGAATTTGAGTACTGCTCCAGATGAGCATTAAAT
AACTTTATACCAGTATAATATTTTGGGGCTTGATGATGATGATGATGCTT
GCCGGCCTCCCATTTTCGTATGACAATCCGGCCTCCCCGTGTTTTCAGTA
TGTACCCATGACGGTGGTTGTGCTTATTAGGCAGCCGAGCCAAAATATAC
ACACTTCAAGGGAGACATAGCCGTTTTGTCGGCGATTCCGCATTCCATAC
GTATTTTGGTTGAGCTACTCTCCTTGTTGGCGAGAAAATGAAAGTGGTAT
CACCATCTGCGACAAGCACAGAGGTTGATTCCATATAAATACATATGGTA
CCATATACAGTATGTACGCTGGTGGTGTACAGCAGTCTGTACTGTACTTT
TTGAGTACTGTACTTTTGTACACAAAAGAAAAATCTGAAAGCGCTTAGAC
CTTCTGAGCATCCCCCAGTTAGGGGGGAAAATGTCAAAACGTTTAGGTGG
GATCATAGGCTGCAAAAACAAAACCTCTTCATGACATTTAAACGGGTTCC
CCAATGGTAGTAACATTGGGTCAACAGTATAATGTCGGGGAGAAGCCCAC
CGTTATACTGTACACTTACATTAATCGCCATGCAGGGACATCATAAAACT
TTAACAAACAAAAGCATTATTCTAATATTATTAGTTGTTGTACACCAGTC
TGTATTTGTCGAGCACTACTACTCTTGTGTTGATATCAATTCTGGTACAA
CCATCCTAGGTCCCGTTATTGTTATCCGCTGTGCACCGCTCATCCCCAGT
GAAGCGAGTTTAAAATTCGTGGAATTTTGGCAGCCAACAAACCACAAAAC
ATCGGTGCGGCGTCTGTCTGTAGTTCTAAACATAGTGCACAAAAGTTTAT
TAGAGTGGCATTTTCTTGTCGGGCTGTGCTTGTATTGATCCACCGACAGT
GCGTGAACGACGGTAAAACCTCCACATACGTTGGTGTCTGTGCTTCACTG
TCTGTTCGTGGTACAGTACAGTACATTACAGTAGAGCAACACCTTTGGCT
TCTCCTGCAAATACTGTAGACCAACGTGTCTGTGCTTCACTGTTTGTTCG
TGGTACTGTAGAGCAACACCTTCGGCAATTTAATTTTGTATCTCCCCCCC
CCCCTCCATATCTTGTCGAAACCGCGTGCCCAAACATAACATTTCCCCAT
CGACAAGATTTTTTCCCCGTGAAGGGCATTACGAAATCTTTGACGGCAAA
ATGTTGGCACGAAAATCTTGTCGAAAAAAAAAATATATATATATATATAT
ACAAGTCTTTGTCGCCATAAAAACCGGTATAAAGAACGATAGTACACGAA
ATTCGACTTCACGGTCGACGGGGGAAAAGAACGGCTGGATGCTTCTCGCG
ATAAAAAAATTGGCAAGCACCGCAGAAGGAAGGTTGGCGAGAAATCCTGT
GTGGCCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCACAAACCTGACGT
CCAGAATAAATGGGATGACAACACACACACACACACACACCAGGTAGCGC
CCTGGCAGCACAACCGTTGGTATGCAATGTTTGAATCGAAACTAAACTTT
CCTGCTTCTCGCTGTATCCCCTGCGGCCGTTGGTCGAGCTAAAAGCAATG
GACCTACAGTATGTACACAGCACTCAGGACGGACTTGATCGAGCAGCAAA
CGATTGACCCAGCGGCAGCAAAGGCATAGTCATAGACATTCGACTGTGTT
GTAGTGACTTGGGTTGGAGTGTTGGGAAAATGATGTGGGAGCATTATTTT
GTGGATGGAGTCGGCTTCCAGAAATGGGTAAATTGTTTTGGGAGCCGGTA
CTACACAAAAATTCGTGTGTCCCAAAAAATCCCAACACCAAAAAAATATC
ACGGATTTGTGACGATAACAACGCTTCACTGCTCCCTCCCACCCTCTCAA
TAAATTACCCCAAAAAAAAACGGATTGTTTGGGTGCCACAGTTCGGAGAT
TATTATTGATATTACTAGTATGTGTATCCATTCTGTAGTAGCCTATCGTA
TGCCTGCGCGGAATCGGTGGACGTGAATGCGCGGTGTGTTTGAGGATGAA
ACACCCTCCTGAATGATGCGAGGAGCACAAACAGTCCGCATTCCTTTTTT
CCTTTCTATCGTGTACCAGGCATAATAGTCATAGCTCGAGCTTTAAGCCG
GGGGAACCGCCCCTCAAGTCAAAGGACTTGTGCCGCTCAACGAGATTTTA
TTCACGTACAGAACGGTAAAGGAAGAAAACATATCTAATGTAGATACGCA
TCAGTTTTAAGTACAGTACAGTTTGACATTCGCAAGGAAATTTTCCGCTT
CCGACCTTTGCTCAGCCCACTTCCCCCCCCTTCCCATTCCCCCCTACAAC
GAAACCCGACCAACGTCAACGTCAACGTCCTACAGCACCGGCACCGAGGT
TCTTCCCGGAGGGTTCTTTCAAGTTCCAGGAAGCTTCAGAAGACGACGAT
GACGACGAATGATGCAAAATGCCCATTTTTATTCTACAGTGCAAGCAGTA
GCATATATATATATATAACATAATTAGACGAGACGCCAGCCGCCGATCGC
AATCGTCACGCCCCTAGGGTTTTTGGCTTGAGCTTGGTTGGCGGGTCTGC
GTCGCTAGTCCCTTCTCTCGAACTGCTGTGTGTCGGGATATAGCTGTGCG
AGCACTGGCTAGACACACAAGAGTGTGTGATGCGTACTGCAGTATGATGT
AATGCTTTTGACGGCTATGGTGCAGTTGCTGTAGGTCCGCTCAAGCTTGC
AGCGCTCGGAAATGTTGGTGTTGGAATCGATTGGTCGTGGTTTTCCCATT
ATTTGTAGGGGCGTGTTGGAAACGACGGGTCGGGGGATACTGTCCGTAGA
AGGTTGACAGGCTTGAAGTCGTGGTTCATGACAGCGGGCCTTGATCCCGT
CCTCACCTACGCGTACGGCAGGGTTGATAAACACCATCTGAGAGAACGAT
TCTGATTTGTAAGCCCATGGTACGGCGGAAGGAAACGTTGTGGTGCTTGA
ATCCTTTGCTCATGAGAGAGGAGATGAAGGTGCGTGATGTTGATTCAACC
ATTGTTTCTAGGACACACGACACCAATTCACACATACCGTCTGTATCACA
CATGTCCCCTACTATGTCAGTAATGTGTGTAAGAAAAGAGAGGCGCAAAA
AAAAATATGGTGAAATCCGAAAAA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1307:175216..184689+

>mRNA_F-serratus_M_contig1307.2303.1 ID=mRNA_F-serratus_M_contig1307.2303.1|Name=mRNA_F-serratus_M_contig1307.2303.1|organism=Fucus serratus male|type=CDS|length=438bp|location=Sequence derived from alignment at F-serratus_M_contig1307:175216..184689+ (Fucus serratus male)
ATGGTGTTTGCCGGTCAGGATGCGTGGCGAAAGCACCCGATGCTCACGGG
TTGCTACAAACGGGCCTTCCCGGGGTTCAGGATCGCGGTAGGCATCTTCG
CGGGTTACTGCGTTGTCGACGGGGCTATCAAGTACATCAGCGATGGTGTT
TGCCGGTCAGGATGCGTGGCGAAAGCACCCGATGCTCACGGGTTGCTACA
AACGGGCCTTCCCGGGGTTCAGGATCGCGGTAGGCATCTTCGCGGGTTAC
TGCGTTGTCGACGGGGCTATCAAGTACATCAGCGCACCGGCACCGAGGTT
CTTCCCGGAGGGTTCTTTCAAGTTCCAGGAAGCTTCAGAAGACGACGATG
ACGACGAATGACACCGGCACCGAGGTTCTTCCCGGAGGGTTCTTTCAAGT
TCCAGGAAGCTTCAGAAGACGACGATGACGACGAATGA
back to top