mRNA_F-serratus_M_contig1307.2302.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: D7FRF5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF5_ECTSI) HSP 1 Score: 301 bits (771), Expect = 6.590e-96 Identity = 145/198 (73.23%), Postives = 177/198 (89.39%), Query Frame = 3
Query: 207 SSSNDGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKI--AEKEREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQALKSPAEDEVELNVDMLDPLTFRVVERIVRDALQG 794
S ++GLQQ++++VN+FFN+P+TLAFR PV+PKAM IPDY QIVK PMDLGTV+ KLE+G+Y+ E+VARD+RLIWSNCILYNSPGSEFG+LAAGLAKKFEER+S++ AEKER++K K +PV+ +AP LDEK+RFTYDLYRTTK +VG+VM QVDARCPQALKSPA+DEVELNVDMLDPLTFR VER++R +LQG
Sbjct: 3 SGDSNGLQQVSKIVNSFFNKPETLAFREPVNPKAMGIPDYPQIVKNPMDLGTVRTKLEEGRYERAEDVARDVRLIWSNCILYNSPGSEFGLLAAGLAKKFEERFSRVKTAEKERDRKPSAKSEPVNTKAPTLDEKVRFTYDLYRTTKVDVGQVMEQVDARCPQALKSPADDEVELNVDMLDPLTFRFVERLLRQSLQG 200
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A8J2WSU6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WSU6_9STRA) HSP 1 Score: 167 bits (424), Expect = 3.510e-45 Identity = 85/191 (44.50%), Postives = 130/191 (68.06%), Query Frame = 3
Query: 219 DGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEKEREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERIVRDAL 788
DG+ MT+++NT RPD++ FR PVD + + + DY Q++ KPMDL TVK +E Y V + A DIRLIW+NC YN GS+F LA G +K+FEER+SK+ + E A+ +++ A P L+EK RF++++YR + E+G ++ ++DA+CP A+ KS ++DE+E+N+D +DP TF ++R VR L
Sbjct: 5 DGMAAMTKIINTLMQRPDSVPFREPVDWRGLGLYDYPQVIAKPMDLTTVKQTIERQGYKSVNDCADDIRLIWNNCKKYNQDGSDFYNLADGFSKRFEERFSKV---KAENPALDEEELTHA--PDLEEKTRFSHNIYRIKQEELGVLVEKLDAKCPDAIDKSTSDDEIEINIDQIDPRTFHDLDRYVRQCL 190
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A7S2UZN8_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZN8_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.700e-44 Identity = 86/202 (42.57%), Postives = 125/202 (61.88%), Query Frame = 3
Query: 174 RRNVHCTTRRMSSSNDGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEKEREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQALKSPAEDEVELNVDMLDPLTFRVVERIVR 779
++N M+S DGL QM ++V+ R D + FR PVD + + I DY QIVK+PMDLGT+K KLE+G+Y E A DIRL+W NC++YN GS++ LA L+KKFE++Y+K++ KE V D + P L+EK+ F +YR + G+V++ +D RCP L DE+E+ VD++DP TF V R ++
Sbjct: 24 KKNFTLPVVAMASKQDGLTQMKKIVSYLMTRQDAVPFREPVDWRQLQIFDYPQIVKRPMDLGTIKKKLENGEYRTPAECAADIRLVWENCMIYNQDGSDYYRLAEKLSKKFEDKYAKVSNKE------VSSAIDDDKVPTLEEKLLFEQMIYRLRAEQTGEVVLTLDQRCPDCLAKVDGDELEITVDVIDPRTFHDVFRTLQ 219
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: B8BSQ7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BSQ7_THAPS) HSP 1 Score: 157 bits (396), Expect = 4.080e-41 Identity = 85/187 (45.45%), Postives = 120/187 (64.17%), Query Frame = 3
Query: 228 QQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEK--EREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERIVR 779
Q M++LV+ F+ + D FR PVD KA+ + DY +VKKPMDLG VK KL + KY + + A D+RLIW NC+ YN+ GS+F +LA +AKKFEE+++K+ E+ E K D P ++K F LY+ TK E+G V+ +DA+CP+AL K+ AEDEVE+NVD++ P F + VR
Sbjct: 6 QAMSKLVSQFYAKADAEPFREPVDYKALGLVDYPLVVKKPMDLGQVKKKLNESKYKSIHDAADDVRLIWKNCMTYNADGSDFYLLAQTMAKKFEEKFAKLVEQFGEAAGDGGDKNGEDDYEDPTPEDKRTFAKLLYKITKEELGNVITDLDAKCPKALVKNSAEDEVEINVDVISPKIFDELLSYVR 192
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A7R9VVT0_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VVT0_9STRA) HSP 1 Score: 157 bits (396), Expect = 4.590e-41 Identity = 83/199 (41.71%), Postives = 124/199 (62.31%), Query Frame = 3
Query: 204 MSSSNDGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEKEREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERIVRDALQGG 797
MS M +LV + + D FR PVD K++ + DY QI+KKPMDLG VK K+E GKY + + A D+RLIW NC+ YN+ GS+F +LA ++KKFE++++K+ +K+ + K+ ++ P L+EK F LY+ +K E+GKV++ +DA+C AL K+ AEDEVE+NVD + P F + V+ G
Sbjct: 1 MSGQGPEWSGMAKLVAQIYAKSDAEPFREPVDWKSLGLFDYPQIIKKPMDLGQVKRKIETGKYGAIHDAAEDVRLIWKNCMQYNADGSDFFILAQNMSKKFEDKFAKL-QKDLDSKSAA-NGKGNSSEPTLEEKRTFAKLLYKISKEELGKVIVDLDAKCSTALTKNSAEDEVEINVDHISPTVFHELMNFVKSCADSG 197
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A7S3JU45_9STRA (Hypothetical protein n=2 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JU45_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.500e-39 Identity = 72/186 (38.71%), Postives = 128/186 (68.82%), Query Frame = 3
Query: 225 LQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEKEREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERIVR 779
++ M ++V+ R D + F PVD + + + DY +++KKPMDLGTVK K+E+ +Y V A DIRL+WSNC YN GS+F LA L+K+FE++++K+ ++ +++ D AP+L+EK +F++ +Y+ + E+G+++ +++ RCP+A+ K+P +DE+E+N+D +DP TFR +++ V+
Sbjct: 1 MEAMKKIVDKLMKRQDAVPFLEPVDWQGLGLVDYPKMIKKPMDLGTVKKKIEENEYASVHACAEDIRLVWSNCKKYNQDGSDFFNLAESLSKRFEDQFAKVKAED----PMIEDDT--EHAPSLEEKTKFSHMIYKIKQEELGQLVEKLEDRCPEAIDKTPNDDELEINIDAIDPKTFRELDKFVK 180
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A7S2MY29_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2MY29_9STRA) HSP 1 Score: 152 bits (383), Expect = 3.080e-39 Identity = 76/175 (43.43%), Postives = 116/175 (66.29%), Query Frame = 3
Query: 234 MTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEKEREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQAL-KSPAEDEVELNVDMLDPLTF 755
M++LV + + D FR PVD K + + DY QI+KKPMDLG VK K+E GKY + + A D+RLIW NC+ YN+ GS+F +LA +++KFE++++K+ +++ + + +A P L+EK F LY+ +K E+G V+ ++D +CP AL K+ AEDEVE+NVD + P F
Sbjct: 9 MSKLVAQIYAKGDAEPFRDPVDWKLLGLFDYPQIIKKPMDLGQVKRKIESGKYGTIHDAAEDVRLIWKNCMQYNADGSDFYILAKNMSRKFEDKFTKLL---KDQGSAGESKTKNATEPTLEEKRSFARSLYKISKVELGIVITELDKKCPAALTKNSAEDEVEINVDHISPAVF 180
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A7S2WIF9_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WIF9_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.220e-38 Identity = 81/204 (39.71%), Postives = 121/204 (59.31%), Query Frame = 3
Query: 204 MSSSNDGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEKEREKKAVVKQDPVDARA-----PALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERIVRDALQGG 797
M + + +++L+ F+ + D FR VD K + + DY QI+KKPMDLG VK +E KY + E A D+RLIW NC+ YN+ GS+F +LA ++KKFE+++SK+ + V D +A P L+EK F LY+ +K E+G+V+ +D++CP AL K+ AEDEVE+NVD + P F V V+ + G
Sbjct: 1 MPTQSQDWSLLSKLLGHFYAKADAEPFREAVDWKGLGLFDYPQIIKKPMDLGQVKRNIETSKYKTIHEAAEDVRLIWKNCMTYNADGSDFYILAQNMSKKFEDKFSKLLKD-------VNVSDTDGKAKSSEEPTLEEKRGFAKGLYKISKEELGRVITDLDSKCPAALTKNSAEDEVEINVDQITPAVFHEVIGFVQGCIGDG 197
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A7S2PE54_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PE54_9STRA) HSP 1 Score: 151 bits (382), Expect = 1.580e-38 Identity = 88/225 (39.11%), Postives = 133/225 (59.11%), Query Frame = 3
Query: 201 RMSSSN---DGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKI---------AEKEREKKAVVKQDPV-------------DARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQALK----SPAEDEVELNVDMLDPLTFRVVERIVRDAL 788
R SS+N + L++M++LV++ + DT FR PV+ + + + DY +I+K+PMDLGTVK KLE +Y+ E A DIRLIWSNC+ YN GS+F +LA L++KFE+R+ K+ A + K+ K D + P L+EK +F ++++ +G VM +D RCPQA++ AEDE+E+NVD LDP TF ++R ++D L
Sbjct: 3 RSSSNNSKQEALRKMSKLVSSMMTKSDTAPFREPVNWRELELWDYPKIIKRPMDLGTVKRKLESTQYETANECAEDIRLIWSNCMTYNQEGSDFYLLAQALSRKFEDRFRKVRAEYDVGGDAYDNTKSKSDGKGGSAENGSGSAAGGKMGDHKPPTLEEKTQFAGNIFKIGGDALGYVMQVIDLRCPQAIERGNNGAAEDELEINVDTLDPRTFAELDRFIQDKL 227
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Match: A0A7S2UQ34_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UQ34_9STRA) HSP 1 Score: 149 bits (376), Expect = 4.850e-38 Identity = 82/202 (40.59%), Postives = 121/202 (59.90%), Query Frame = 3
Query: 210 SSNDGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDLGTVKAKLEDGKYDGVEEVARDIRLIWSNCILYNSPGSEFGVLAAGLAKKFEERYSKIAEK----EREKKAVVKQDPVDARAPALDEKIRFTYDLYRTTKAEVGKVMMQVDARCPQAL-KSPAEDEVELNVDMLDPLTFRVVERIVRDALQGGS 800
S D +++ +++ + +PD FR PV+ KA+ + DY Q++K+PMDLG +K LE KY V EVA DI+L+W NC+ YN+ GS+F LA L+ FE R++KIA+ + + P L+EK F LY+ +K E+GKV+ ++D +CP AL K+ AEDE+E+NVD + PL F V+ V GGS
Sbjct: 2 SQTDEFKEIAKVLAQMYAKPDAEPFREPVEWKALGLFDYPQVIKRPMDLGHIKRNLEKNKYSTVHEVAADIKLVWKNCMTYNADGSDFYKLAKKLSNSFEARFAKIAKDGGGDDTANGXXXXXXXXXSSEPTLEEKRTFVKGLYKISKEELGKVITELDTKCPAALSKNNAEDEIEINVDNITPLVFHEVKGFVASC-SGGS 202 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1307.2302.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1307.2302.1 >prot_F-serratus_M_contig1307.2302.1 ID=prot_F-serratus_M_contig1307.2302.1|Name=mRNA_F-serratus_M_contig1307.2302.1|organism=Fucus serratus male|type=polypeptide|length=243bp MSSSNDGLQQMTRLVNTFFNRPDTLAFRSPVDPKAMNIPDYFQIVKKPMDback to top mRNA from alignment at F-serratus_M_contig1307:171576..175043- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1307.2302.1 ID=mRNA_F-serratus_M_contig1307.2302.1|Name=mRNA_F-serratus_M_contig1307.2302.1|organism=Fucus serratus male|type=mRNA|length=3468bp|location=Sequence derived from alignment at F-serratus_M_contig1307:171576..175043- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1307:171576..175043- >mRNA_F-serratus_M_contig1307.2302.1 ID=mRNA_F-serratus_M_contig1307.2302.1|Name=mRNA_F-serratus_M_contig1307.2302.1|organism=Fucus serratus male|type=CDS|length=1458bp|location=Sequence derived from alignment at F-serratus_M_contig1307:171576..175043- (Fucus serratus male)back to top |