mRNA_F-serratus_M_contig1303.2286.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: D7FVB8_ECTSI (CobW C-terminal domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVB8_ECTSI) HSP 1 Score: 556 bits (1432), Expect = 3.920e-192 Identity = 312/491 (63.54%), Postives = 358/491 (72.91%), Query Frame = 3
Query: 72 MDSDEECPPDLVSAGDF---TESPAAGSPKSSTVTRDC-QTTNPPTKPAVEPIAAVPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSEEVLDDVLTQIRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHG------HGHSDD--CAQCAATPEEGPRGTPCSVHDPAVTTCAVDILGSMELRRLERWLGELLWDPPPGGTEVYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDETRHCKVVFIGRYLSKDKLEQGLKSCMI 1508
M+SD++CPPDLV A + + SS V + PPT P AVPVTIVTGFLGAGKTTLLNYILTQ+HGRRIAVIENEVGDSMDIE+LIAKDGADGS+LADNLFEL+NGCICC+VKDDLV TLE LLQRRNKFDY+IIETTGLANPGPVASVFWLD+ALESALRLD I+TLVDAKN RQLQR EG +EQ K P NEAA+QVAYADRVLINK+DLVS E LDDV+ ++RTIN +A +RCT+RSAVDL+W+LDT+CFS ELA + P LAP R L Q EG + A + ++G +G + H+H EP G H H+D C +CAA EGP GT CSVHDP+VTTCAVD+ GS++L RLERWLG LLWDPPPGGTEVYRVKGVVS EG DERFVVQGV D+FEV P +GSAW+E E R CKVVFIGR LS LE G++SCM+
Sbjct: 1 MESDDDCPPDLVPAQGLLALSSNDTLPEDTSSDVAEVVVEVERPPTAPG-----AVPVTIVTGFLGAGKTTLLNYILTQDHGRRIAVIENEVGDSMDIESLIAKDGADGSVLADNLFELRNGCICCAVKDDLVTTLEMLLQRRNKFDYVIIETTGLANPGPVASVFWLDEALESALRLDSIVTLVDAKNFVRQLQRVPGEGAEAGAEGEEQSG--KRPKNEAAMQVAYADRVLINKSDLVSTETLDDVVGRVRTINALAEVRCTKRSAVDLAWILDTECFSSELAAALDPSLAPPRALL---GTAQQNEGGRGSSAADRGIARTG---------SGPGDAHVHSHDVEPSGGHTESVHHHADGEACDECAAA--EGPGGTACSVHDPSVTTCAVDLPGSLDLSRLERWLGGLLWDPPPGGTEVYRVKGVVSVEGRDERFVVQGVADLFEVTPAEVVGSAWQEGEARRCKVVFIGRLLSSRDLELGIRSCMV 470
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: A0A835YKS4_9STRA (CobW/HypB/UreG, nucleotide-binding domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKS4_9STRA) HSP 1 Score: 339 bits (869), Expect = 2.510e-108 Identity = 210/436 (48.17%), Postives = 260/436 (59.63%), Query Frame = 3
Query: 201 PAVEPIAAVPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSEEVLDDVLTQIRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPR-GTPCSVHDPAVTTCAVDILGSMELRRLERWLGELLWDPPPGGTEVYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDETRHCKVVFIGRYLSKDKLEQGLKSCM 1505
P+ AVPVTI+TGFLG+GKTTLLNY+LTQ+HG+RIAVIENE GDSMDIE LIAKDG DGS+LADNLFEL+NGCICC+VKDDLV TLETLLQ+R+KFDYIIIETTGLANPGPVA+ FWLDDALESALRLD IIT+VDAKNI R L EAA+Q+A+ADR+L+NK+DLVS + + +++R IN I T R A+DL VLD +CF + T A P+ S+ + H HGD C AA G G PC VH V+T A+ + +++L L D VYR+KGV++ GSD+++V+QGV D+F+V T A AW+ DE R KVVFIGR L + KLE+GL+ C+
Sbjct: 15 PSAPGAGAVPVTILTGFLGSGKTTLLNYVLTQDHGKRIAVIENEFGDSMDIEQLIAKDGMDGSVLADNLFELRNGCICCTVKDDLVTTLETLLQQRSKFDYIIIETTGLANPGPVAACFWLDDALESALRLDAIITVVDAKNIARYLDES----------------------REAALQIAFADRLLLNKSDLVSAARVAALSSRLRGINAACDIEVTHRCAIDLDKVLDLRCFHAD------------------------------STAAXXXXXXXXXXXXXXPVELCSD--AEHEHGDS---------CGHGAAQSSSGSSSGAPC-VHTSGVSTFAITLTEAVDLVAL---------DASRPHRTVYRIKGVLAVAGSDKKYVLQGVHDLFDVTETTA---AWEPDEPRLSKVVFIGRGLDRGKLEEGLRGCV 374
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: B5Y598_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y598_PHATC) HSP 1 Score: 276 bits (706), Expect = 1.400e-84 Identity = 183/429 (42.66%), Postives = 235/429 (54.78%), Query Frame = 3
Query: 228 PVTIVTGFLGAGKTTLLNYIL-TQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSEEVLDDVLTQIRTINTVAAIRCTRRSAV-DLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPCSVHDPAVTTCAVDILGSMELRRLERWLGELLWDPPPGGTEVYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDETRHCKVVFIGRYLSKDKLEQGLKSCMI 1508
PVTI++GFLG+GKTTL+ YIL + +HG+RIAVIENE G+ + +E++IA+DG D L D L EL NGCICC+VKD LV TLE LLQRR DYI+IE +G+ANPGP+AS+FWLD+ L S LRLDGI+TLVDA ++ RQL G EAA Q+AYADR+L+NK DLV E +L IRTI+ A IR T+ SAV DL+WVLD CF + R KDV + +N S H+H H HG C+ C A H +V+T A+ GS++LR+L++WL LLW +V V+ RF+VQ V D++E P W +E R CKVVFIGR L K+ L +G SCM+
Sbjct: 1 PVTILSGFLGSGKTTLIQYILKSPDHGKRIAVIENEFGEGLAVESMIARDGVDNGSLID-LIELPNGCICCTVKDSLVSTLELLLQRRRDLDYILIECSGMANPGPIASLFWLDEGL-SRLRLDGIVTLVDAAHLERQL------GAT----------------KEAAQQIAYADRILLNKVDLVDEASALRLLNLIRTIHPTAPIRRTQFSAVPDLTWVLDASCFDVD----------------RVKDVDR--------------------------ALNEIEHCSDHSH---QHDHGKEATCSICFA-----------HKHTASVSTLAIVEEGSVDLRKLDQWLASLLWPNQDEQDKVLPVEFTDDHGLDSRRFIVQAVHDLWETHPASR-ELRWDSEEVRDCKVVFIGRNLKKEDLRKGFLSCML 348
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: A0A8K1CIB9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIB9_PYTOL) HSP 1 Score: 275 bits (703), Expect = 7.940e-84 Identity = 179/438 (40.87%), Postives = 238/438 (54.34%), Query Frame = 3
Query: 219 AAVPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSEE-------VLDDVLTQIRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPCSVHDPAV-TTCAVDILGSMELRRLERWLGELLWDPPPGGTEVYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDETRHCKVVFIGRYLSKDKLEQGLKSCMI 1508
A VPVTI++GFLGAGKTT LNYILT HG+RIAVIENE GD + +E LIAKDGADG + D+ +EL NGCICCSV+DDL+ TLE LL++R++FDYI+IETTG+ANPG VAS+FW D LE + LDGI+TLVDA I L + EAA Q+AYADR+L+NK DL+S + V+++ ++R +N VAA+ T R++VDL+ VLD + F+ + A +V L RP SD A VH V TTC ++ ++LERWLGELLW+ T+ +RVKGV++ +G ++V+Q V ++FEV T W E E +VVFIG +L + LE GL+SC+I
Sbjct: 34 ALVPVTIISGFLGAGKTTFLNYILTAPHGKRIAVIENEFGDEIGVENLIAKDGADGKVF-DDFYELSNGCICCSVRDDLLNTLERLLEKRDRFDYILIETTGMANPGKVASIFWADAELEGRIFLDGIVTLVDAPRISYLLDH-------------------RDTQLEAASQLAYADRILLNKQDLLSSDDPSGERSVIEE---RVRKVNGVAALTWTERASVDLAHVLDIQSFTTQRAQQVEEALRVERP---------------------------------------------------------SDSAA----------------VHTGGVQTTCITVADARLDQQKLERWLGELLWEQADD-TKFFRVKGVLAIDGERNKYVLQAVHELFEVYATQ---EPWDEQEKVQSRVVFIGLHLERLALEAGLQSCLI 371
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: A0A024GV83_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GV83_9STRA) HSP 1 Score: 275 bits (703), Expect = 9.540e-84 Identity = 180/439 (41.00%), Postives = 254/439 (57.86%), Query Frame = 3
Query: 219 AAVPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRN-KFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSEEVL--DDVLTQIRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPCSVHDPAVTTCAVDILGSM-ELRRLERWLGELLWDPPPGGT-----EVYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDETRHCKVVFIGRYLSKDKLEQGL-KSCM 1505
A++PVTI++GFLG+GKTTLLNYILT +HG+RIAVIENE G+ + IE+L+AKDG DG L + FEL NGCICCSV+DDLV TLE LL+ ++ KFDYII+ETTG+ANPG VASVFW+DD LE + LDGIIT+VDA NI + L+R S NEAA Q+AYADR+L+NK DL+ + D++ + I++IN +A T++ VDLS++L+ + FS + A +V MLK + K G + + + +N + C + ++ RG +H V T V I + +++LERWLGELLW G E++R+KGVV+ E S ++++QGV D+FE+ + + W + R ++VFIG L K +E L +SC+
Sbjct: 7 ASIPVTILSGFLGSGKTTLLNYILTASHGKRIAVIENEFGEEIGIESLVAKDGLDGQYLPE-FFELGNGCICCSVRDDLVNTLERLLETKSGKFDYIIVETTGMANPGKVASVFWVDDELEGRMYLDGIITIVDAHNIGKNLERDSTR-------------------NEAASQLAYADRILLNKEDLLEGDNASKDNIESLIQSINGLAPFTWTKKGIVDLSYILEIQAFSMDRANQVE---------------------LMLKDDL--NCSKKGTKDDMESAINSDIHAN----------------CDHITNSEKDKVRG---QIHSGKVRTICVTIPQKIFSIQKLERWLGELLWADQKEGLCDANFEIFRIKGVVAIEKSPYKYILQGVHDLFEITSSKEV---WSD---RISRIVFIGTGLQKTDIELSLIQSCL 377
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: A0A329RXQ7_9STRA (CobW C-terminal domain-containing protein n=12 Tax=Phytophthora TaxID=4783 RepID=A0A329RXQ7_9STRA) HSP 1 Score: 274 bits (700), Expect = 3.940e-83 Identity = 181/451 (40.13%), Postives = 250/451 (55.43%), Query Frame = 3
Query: 216 IAAVPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSE-EVLDDVLTQIRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPCSVHDPAVTTCAVDIL-GSMELRRLERWLGELLWDPP--------PGGT-----EVYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDE-----TRHCKVVFIGRYLSKDKLEQGLKSCMI 1508
++ +PVTI++GFLGAGKTTLL +IL+ +HG+RIAVIENE G+ + +E+L+AKDGA G ++ D +EL NGC+CCSV+DDLV TLE LL+RR++FDYI++ETTG+A+PG VASVFW+DD LE + LDGI+TLVDA + L + EAA Q+AYADR+L+NK DLV + E ++ ++ +N VA++R T RS VDL +L+ K F+ A +V L T+L EGK E N DE H H ++H + T V I G ++ +LERWLGELLWD PG +++RVKGVV+ G +F++Q V ++FEV A W EDE +R +VVFIG +L K +LE GL+SC++
Sbjct: 21 LSMIPVTILSGFLGAGKTTLLKFILSASHGKRIAVIENEFGEEIGVESLVAKDGAGGDVM-DGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYIVVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLNFHLTHPDTQ-------------------REAAAQLAYADRILLNKGDLVPDIEQRLEIEQKVTQVNGVASVRWTERSRVDLDDILNIKSFTTSRAEQVEKELH-----------------TLL--------------TEGK-------EEDHENCKDESHDH----------------------AIHTGGMQTTCVRIRDGPLDQDKLERWLGELLWDQDEDAAAEIKPGSEAATRQKLFRVKGVVAIAGEPSKFILQAVHELFEVY---ASEERWTEDELNNKASRVTQVVFIGLHLRKSELEAGLRSCVV 388
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: H3GAA9_PHYRM (CobW C-terminal domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GAA9_PHYRM) HSP 1 Score: 266 bits (681), Expect = 9.870e-81 Identity = 174/439 (39.64%), Postives = 241/439 (54.90%), Query Frame = 3
Query: 225 VPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSEEVLDDVLTQIRT-INTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPCSVHDPAVTTCAVDIL-GSMELRRLERWLGELLWDPPPG-GTE---VYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDET-----RHCKVVFIGRYLSKDKLEQGLKSCMI 1508
+PVTI++GFLGAGKTTLL +IL+ +HGRRIAVIENE GD + +E+L+AKDGADG+++ D +EL NGC+CCSV+ DLV TLE LL+RR++FDYI++ETTG+A+PG VASVFW+DD LE + LDGI+TLVDA + L R EAA Q+AYADR+L+NK DLV ++ + + + T +N VA++R T RS VDL +L+ K F+ A +V L +G H D+ H H H + H + T V + G ++ +LERWLGELLW+ G+E ++RVKGVV+ G +F++Q V ++FEV A W E E R +VVFIG +L K +L+ GL+ C++
Sbjct: 8 IPVTILSGFLGAGKTTLLQFILSADHGRRIAVIENEFGDEVGVESLVAKDGADGAVM-DGFYELSNGCVCCSVRSDLVNTLEKLLERRDRFDYILVETTGMADPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLDFHL-------------------RHPDTQREAAAQLAYADRILLNKGDLVPDQDAREAIEKTVTRVNGVASVRWTERSRVDLDDILNIKSFTTSRAEQVEKEL----------------------------------------------QGQEHETCDDEH-HDH--------------------TTHTGGMQTMCVRVRDGPLDQDKLERWLGELLWEQDDDVGSERQKLFRVKGVVAVAGEPNKFILQAVHELFEVY---ASEERWSEGELQSKEGRVTQVVFIGLHLRKSELQAGLEGCVV 356
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: A0A3M6VD06_9STRA (CobW C-terminal domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VD06_9STRA) HSP 1 Score: 267 bits (683), Expect = 1.350e-80 Identity = 170/454 (37.44%), Postives = 251/454 (55.29%), Query Frame = 3
Query: 207 VEPIAAVPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLV-SEEVLDDVLTQIRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPC-SVHDPAVTTCAVDILGSMELRRLERWLGELLWDPPPG-GTEV------------YRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDE-----TRHCKVVFIGRYLSKDKLEQGLKSCMI 1508
V + +PVTI++GFLGAGKTTLL +IL ++HG+RIAVIENE G+ + +E+L+A+DG DG ++ D +EL NGC+CCSV+DDLV TLE LL+RR++FDYI++ETTG+A+PG VAS+FW+D+ L+ + LDGI+T+VDA + L + + EAA Q+AYADR+L+NK DLV +E + +++ IN +A+++ T RS VDL +L+ K F+ A +V L R L G++ + GHG+ DD QC + G T C + D G ++ +LERWLG+LLW+ G E+ +RVKGVV+ G +F++Q V ++FEV P+ W +DE R +VVFIG +L K++L+ GL+ C++
Sbjct: 16 VTSLPTIPVTILSGFLGAGKTTLLQFILLEDHGKRIAVIENEFGEEVGVESLVARDGTDGKVM-DGFYELSNGCVCCSVRDDLVNTLEKLLERRDRFDYILVETTGMADPGKVASIFWVDNELDGRIILDGIVTVVDAPRLEFHL-------------------KHRDTQREAAAQLAYADRILLNKGDLVHGQEKRQQIEDRVKQINGIASVKWTERSRVDLDDILNIKSFTTNRAEQVEKELQ--RLLHEGENKDEQ-------------------------------------------GHGNFDD-EQCLSATHTGGMQTTCVRIRD-----------GPLDQDKLERWLGKLLWEQDEDVGAEMELGSNTVKHQKLFRVKGVVAVAGDPHKFILQAVHELFEVYPSE---ECWTKDELNGTDARVTQVVFIGLHLRKNELQAGLEGCIV 389
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: K3WNX3_GLOUD (CobW C-terminal domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WNX3_GLOUD) HSP 1 Score: 267 bits (682), Expect = 2.200e-80 Identity = 172/438 (39.27%), Postives = 245/438 (55.94%), Query Frame = 3
Query: 225 VPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLV-SEEVLDDVLTQIRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPC-SVHDPAVTTCAVDILGSMELRRLERWLGELLWDPPPGGTE-------VYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKE--DETRHCKVVFIGRYLSKDKLEQGLKSCM 1505
VPVTI++GFLGAGKTTLL YILT NHG+RIAVIENE G+ + +E LIAKDGA+G + D+ +EL NGC+CCSV+DDLV TLE LL RR++FDYI++ETTG+ANPG VASVFW+DD LE + LDGI+TLVDA ++ L D + + NEAA Q+AYADR+L+NK DLV SEE + ++ +++ +N +A + T R+ +DL +L+ + F+ + AL++ ++L + G EG+ E TH G T C S+ D A +++ +LERWLGELLWD G + ++R+KGV++ +F++Q V ++FEV + +W E E ++VFIG +L +LE G +SC+
Sbjct: 39 VPVTILSGFLGAGKTTLLRYILTANHGKRIAVIENEFGEEIGVENLIAKDGANGQVF-DDFYELSNGCVCCSVRDDLVNTLEKLLARRDRFDYILVETTGMANPGKVASVFWVDDELEGRIFLDGIVTLVDAPRLQFHL---------DHPDTR----------NEAASQLAYADRILLNKRDLVTSEERQEAIVARVKAVNAIAKVSWTHRAEIDLDEILNIQSFTSQRALDIE---------------------SILTAQQLQQQGHHRHSGEGE-----HKEEHTHT-----------------------GAMQTTCLSIGDGA----------RLDMSKLERWLGELLWDQADGVSSASTKDQRLFRMKGVLAIADEPNKFILQAVHELFEVYVSD---ESWSEASQEDVCSRIVFIGLHLDLKRLESGFRSCI 394
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Match: A0A421GYX4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GYX4_9STRA) HSP 1 Score: 267 bits (682), Expect = 2.630e-80 Identity = 173/458 (37.77%), Postives = 244/458 (53.28%), Query Frame = 3
Query: 189 PPTKPAVEPIAAVPVTIVTGFLGAGKTTLLNYILTQNHGRRIAVIENEVGDSMDIEALIAKDGADGSMLADNLFELKNGCICCSVKDDLVMTLETLLQRRNKFDYIIIETTGLANPGPVASVFWLDDALESALRLDGIITLVDAKNIRRQLQRGSDEGGVDRENVKEQPVREKTPPNEAAIQVAYADRVLINKTDLVSEEVLDDVLTQ-IRTINTVAAIRCTRRSAVDLSWVLDTKCFSPELALEVGPGLAPTRPLARGKDVGQDTEGTMLKTPAVPSLGKSGGRVEGKPLVNGSNEGSTHNHGDEPHGHGHSDDCAQCAATPEEGPRGTPCSVHDPAVTTCAVDILGSMELRRLERWLGELLWDP---------PPGGT----EVYRVKGVVSAEGSDERFVVQGVGDIFEVAPTGAIGSAWKEDE-----TRHCKVVFIGRYLSKDKLEQGLKSCM 1505
PP + + +PVTI++GFLGAGKTTLL +IL+++HG+RIAVIENE GD + +E+L+AKDG DG + D +EL NGC+CCSV+DDLV TLE LL RR++FDYI++ETTG+A+PG VAS+FW+DD LE + LDGI+TLVDA + L + EAA Q+AYADR+L+NK DLV+ + V+ Q + +N +A++R T +S VDL+ +L+ K F+ A EV L L++ E HNH + GH H + TTC G ++ +LERWLGELLW+ P T +++RVKGV++ G +F++Q V ++FEV + W D+ R +VVFIG +L K +LE GL+ C+
Sbjct: 20 PPALETTDQLPLIPVTILSGFLGAGKTTLLKFILSEHHGKRIAVIENEFGDEIGVESLVAKDGNDGQVF-DGFYELSNGCVCCSVRDDLVNTLEKLLDRRDRFDYILVETTGMADPGKVASIFWVDDELEGRIYLDGIVTLVDAPRLNFHLSHPDTQ-------------------REAAAQLAYADRILLNKGDLVTNQSERRVVEQLVSQVNAMASVRWTEKSRVDLNDILNIKSFTTSRAEEVENEL--------------------------------------HALLHHGEEAPDHNHANCSDGH-HDHEMTHTGGMQ----------------TTCVRIRDGPLDQDKLERWLGELLWEQDEEINSGVQPEDSTYKRQKLFRVKGVIAIAGESNKFILQAVHELFEVYTSE---ERWPADDLSGANARCTQVVFIGLHLRKGELEAGLQQCV 399 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1303.2286.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1303.2286.1 >prot_F-serratus_M_contig1303.2286.1 ID=prot_F-serratus_M_contig1303.2286.1|Name=mRNA_F-serratus_M_contig1303.2286.1|organism=Fucus serratus male|type=polypeptide|length=480bp MDSDEECPPDLVSAGDFTESPAAGSPKSSTVTRDCQTTNPPTKPAVEPIAback to top mRNA from alignment at F-serratus_M_contig1303:130838..135528- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1303.2286.1 ID=mRNA_F-serratus_M_contig1303.2286.1|Name=mRNA_F-serratus_M_contig1303.2286.1|organism=Fucus serratus male|type=mRNA|length=4691bp|location=Sequence derived from alignment at F-serratus_M_contig1303:130838..135528- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1303:130838..135528- >mRNA_F-serratus_M_contig1303.2286.1 ID=mRNA_F-serratus_M_contig1303.2286.1|Name=mRNA_F-serratus_M_contig1303.2286.1|organism=Fucus serratus male|type=CDS|length=2880bp|location=Sequence derived from alignment at F-serratus_M_contig1303:130838..135528- (Fucus serratus male)back to top |