mRNA_F-serratus_M_contig1303.2284.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1303.2284.1
Unique NamemRNA_F-serratus_M_contig1303.2284.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: D7FVA9_ECTSI (5'-deoxynucleotidase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVA9_ECTSI)

HSP 1 Score: 307 bits (787), Expect = 4.580e-98
Identity = 153/190 (80.53%), Postives = 172/190 (90.53%), Query Frame = 2
Query:  107 PSSALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVTDARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNRRKDARSVVGP 676
            P+SALSF+R+VGKLK+LKRTGW+HRGV  PESV+DHMYRMAMCSFL+TD  LDRSR+MKLA+VHDLAEALAGDIAPFQKV+KE+KRRLEEEGL+KICATIGSDPIA EIK+LW EYEDCTSEEARVVKD DK EMIVQAD+YE+GQG+DLGEFFEST G FTT QVQSWDKELR QR  RR++A+    P
Sbjct:   14 PASALSFMRVVGKLKELKRTGWVHRGVAKPESVSDHMYRMAMCSFLITDPTLDRSRIMKLAMVHDLAEALAGDIAPFQKVSKEDKRRLEEEGLDKICATIGSDPIALEIKKLWYEYEDCTSEEARVVKDLDKLEMIVQADDYEKGQGLDLGEFFESTEGCFTTPQVQSWDKELREQRAARRQEAKPSNQP 203          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: W7U169_9STRA (5'-deoxynucleotidase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U169_9STRA)

HSP 1 Score: 224 bits (571), Expect = 6.800e-66
Identity = 119/182 (65.38%), Postives = 140/182 (76.92%), Query Frame = 2
Query:  101 PSPSSALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVTDARLDRSRVMKLAVVHDLAEALAGDIAPF-QKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQ-GMDLGEFFESTAGVFTTSQVQSWDKELRAQRD 640
            PS S AL FLR+VGKLK LKRTGW++  V  PESVADHMYRMAMCSFL+TD  LDR+R+MKLAVVHDLAEAL GDI P  ++ TKE KR LEE+ +  I   +G + I+ EI  LWLEYED ++ EARVVKDFDKFEMI+QADEYE+ Q G +L +FF+STA  F   QV+ WD ELR QRD
Sbjct:   54 PSASQALDFLRVVGKLKTLKRTGWVNNKVALPESVADHMYRMAMCSFLITDPALDRTRLMKLAVVHDLAEALVGDIVPHDERYTKELKRTLEEDAIRSIAGDLGHEGISAEIMSLWLEYEDQSTPEARVVKDFDKFEMILQADEYERSQPGQNLEDFFQSTANAFQHPQVREWDAELRKQRD 235          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: A0A7S1TPL2_9STRA (5'-deoxynucleotidase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPL2_9STRA)

HSP 1 Score: 221 bits (563), Expect = 3.090e-65
Identity = 113/181 (62.43%), Postives = 140/181 (77.35%), Query Frame = 2
Query:  107 PSSALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVTDARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNRR 649
            PS  L FLR+VG LK+ KRTGW+HRGVD PESVADH YRMAMC+FL      DR+RVMKLAVVHDLAE+L GDIAP QKV+ E+K R+E E +E+I ++IG + IA EI +L+ +YE+  + EA++VK+ DKFEMIVQADEYE+ QG +L EFF+STA  F T  + SW+ ELR QRD RR
Sbjct:   14 PSKVLDFLRVVGGLKRTKRTGWVHRGVDDPESVADHSYRMAMCAFLADGDAYDRNRVMKLAVVHDLAESLVGDIAPHQKVSNEDKARMELEAMERITSSIGHEAIAAEILDLFTDYEEQRTPEAQLVKEIDKFEMIVQADEYEREQGKELQEFFDSTAASFQTPMMASWNAELRRQRDARR 194          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: A0A7S3XU85_HETAK (5'-deoxynucleotidase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XU85_HETAK)

HSP 1 Score: 219 bits (557), Expect = 1.940e-63
Identity = 111/174 (63.79%), Postives = 134/174 (77.01%), Query Frame = 2
Query:  116 ALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVTDARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQR 637
            ++ F RIVG+LK+LKRTGW+ RGVD PESV+DHMYRM+MCSFL++D  +DR    K+A+VHDLAEALAGDI P   V++ EKRR EE  L+ I  T+ S  I  EI+ELWLEYE  ++ EA  VKD DKFEMI+QADEYE+GQ  DL EFF+ST G F T QVQ WD+ELRAQR
Sbjct:   50 SIEFFRIVGQLKKLKRTGWVKRGVDLPESVSDHMYRMSMCSFLLSDPAVDRMWCTKMALVHDLAEALAGDITPHCGVSEAEKRRREEAALDNILETVPSPEIGNEIRELWLEYESGSTPEAIFVKDLDKFEMILQADEYERGQNKDLSEFFKSTEGYFKTQQVQQWDQELRAQR 223          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: A0A1W0A6A0_9STRA (5'-deoxynucleotidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A6A0_9STRA)

HSP 1 Score: 213 bits (542), Expect = 3.130e-62
Identity = 106/188 (56.38%), Postives = 145/188 (77.13%), Query Frame = 2
Query:  104 SPSSALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLV-TDARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDP-IAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNRRKDAR 661
            S SSAL FLR+ G LK+LKRTGW++  V+ PESVA+HMYR+AMCS L+  D+ +DR + MK+A+VHDLAEA  GDI P   V+ E+K ++E++ +++IC  +G++   A+EI+ELW EYE+ ++EEA++VKDFDKFEMI+QADEYE  QG+DL +FF ST G F T  VQSW  EL AQRD R+ +++
Sbjct:    7 SASSALEFLRVCGALKRLKRTGWVNHKVESPESVAEHMYRLAMCSLLLDNDSSVDRMKCMKMAIVHDLAEAFVGDITPHDGVSDEDKHKMEKDAIDEICTKLGAESEAAKEIRELWHEYENASTEEAKMVKDFDKFEMILQADEYENAQGVDLQDFFNSTKGKFKTPLVQSWVSELNAQRDTRKSNSK 194          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: A0A8K1FQK2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FQK2_PYTOL)

HSP 1 Score: 211 bits (536), Expect = 3.630e-61
Identity = 108/179 (60.34%), Postives = 134/179 (74.86%), Query Frame = 2
Query:  116 ALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVTDAR--LDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNR 646
            A+ FLRI G+LKQLKRTGW++  V  PESVADHMYRM MC  L+ +    ++RS+ +K+A+VHDLAE+L GDI P   V  E+K R+E+E LE+ICAT+G  P A EIKELW EYE  TSEEAR+VKDFDKFEMI+QADEYE+ Q + L +FF+ST G F T  V+SW  EL  QR+ R
Sbjct:   12 AIEFLRICGRLKQLKRTGWVNHKVHLPESVADHMYRMGMCCLLIDEVNPSVNRSKCIKMAIVHDLAESLVGDITPHDGVADEDKHRMEKEALEQICATLGDSPAATEIKELWHEYEAGTSEEARMVKDFDKFEMILQADEYERAQNIPLDDFFQSTQGKFRTPLVRSWVDELIQQREAR 190          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: A0A6G0XIE9_9STRA (5'-deoxynucleotidase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIE9_9STRA)

HSP 1 Score: 209 bits (532), Expect = 9.200e-61
Identity = 107/180 (59.44%), Postives = 136/180 (75.56%), Query Frame = 2
Query:  113 SALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVT-DARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNRR 649
            SA+ FLRI G+LK+LKRTGW++  V+ PESVADHMYRMAMC+ L+  D+ LDR+R +K+A+VHDLAE+  GDI P   V+ EEK RLE+  ++ ICA +G    A EIKELW EYED +++EA++VKDFDKFEMI+QADEYE  Q ++L +FF ST G F T  VQSW  EL AQR  R+
Sbjct:   10 SAVEFLRICGQLKRLKRTGWVNHKVNAPESVADHMYRMAMCTMLLDGDSSLDRTRCIKMAIVHDLAESYVGDITPHDGVSNEEKHRLEKNAIDDICAKLGPSQAAVEIKELWQEYEDASTDEAKMVKDFDKFEMILQADEYESVQDVNLDQFFTSTEGKFKTPLVQSWVAELNAQRHARK 189          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: T0PSL2_SAPDV (5'-deoxynucleotidase n=2 Tax=Saprolegniaceae TaxID=4764 RepID=T0PSL2_SAPDV)

HSP 1 Score: 205 bits (521), Expect = 3.770e-59
Identity = 102/184 (55.43%), Postives = 140/184 (76.09%), Query Frame = 2
Query:  104 SPSSALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLV-TDARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDP-IAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNRR 649
            S SSAL FLR+ G+LK+LKRTGW++  V  PESV+DHMYR+AMCS L+  D+ +DR + +K+A+VHDLAEA  GDI P   V+ E+K +LE + +++IC  +G++   A+EI++LW EYE+ +++EA++VKDFDKFEMI+QADEYE  Q +DL +FF ST G F T  VQSW +EL  QRD R+
Sbjct:    7 SASSALDFLRVCGQLKRLKRTGWVNHQVHAPESVSDHMYRLAMCSLLLDNDSSVDRMKCIKMAIVHDLAEAFVGDITPHDGVSDEDKHKLERDAIDEICTKLGAESQAAKEIRDLWFEYENASTDEAKMVKDFDKFEMILQADEYESVQAVDLQDFFNSTQGKFKTPLVQSWVQELNTQRDARK 190          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: A0A7S2UUH7_9STRA (5'-deoxynucleotidase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH7_9STRA)

HSP 1 Score: 204 bits (520), Expect = 8.550e-59
Identity = 106/177 (59.89%), Postives = 134/177 (75.71%), Query Frame = 2
Query:  119 LSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVTDARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQ-GMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNR 646
            L FLR VGKLK LKRTGW+ + V+ PESV+DHMYRM MCSFL+ D  +D++R MK+A+VHDLAEALAGDI P   V+  +K   EE  L++I   I ++ IA+EIK+LWLEYE+ ++ EA +VKDFDKFEMI+QADEYE  Q  MDL +FFEST GVF +  V++ D ELR+QR  R
Sbjct:   29 LDFLRTVGKLKNLKRTGWVKKDVNLPESVSDHMYRMGMCSFLIQDPSIDKARCMKIALVHDLAEALAGDITPHCGVSDADKHAKEEAALDEIVGQIQNEEIAKEIKDLWLEYENVSTPEAAMVKDFDKFEMILQADEYECAQEDMDLSDFFESTRGVFKSDMVKALDTELRSQRSQR 205          
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Match: A0A0P1AY03_PLAHL (5'-deoxynucleotidase n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY03_PLAHL)

HSP 1 Score: 202 bits (515), Expect = 2.850e-58
Identity = 103/179 (57.54%), Postives = 132/179 (73.74%), Query Frame = 2
Query:  116 ALSFLRIVGKLKQLKRTGWIHRGVDGPESVADHMYRMAMCSFLVTDAR--LDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEKRRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEMIVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNR 646
            A+ FLR+ G LK LKRTGW++  V  PESVADHMYRM+MC  L+ DA   L+RS+ +K+A+VHDLAE+L GDI P   + +E K R+E+E L+ IC+T+G  P A EI+ELW EYE   +EEA++VKDFDKFEMI+QADEYE+ Q + L +FF+ST G F T  VQSW  EL  QR+ R
Sbjct:   10 AIEFLRLCGSLKTLKRTGWVNNKVAMPESVADHMYRMSMCCMLLEDANEALNRSKCIKMAIVHDLAESLIGDITPHDGIAEEVKHRMEKEALDNICSTLGDTPSALEIRELWNEYEAGLTEEAKMVKDFDKFEMILQADEYEKAQNISLDDFFQSTKGKFRTPLVQSWVSELSTQRNAR 188          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1303.2284.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVA9_ECTSI4.580e-9880.535'-deoxynucleotidase n=2 Tax=Ectocarpus TaxID=2879... [more]
W7U169_9STRA6.800e-6665.385'-deoxynucleotidase n=1 Tax=Nannochloropsis gadit... [more]
A0A7S1TPL2_9STRA3.090e-6562.435'-deoxynucleotidase n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S3XU85_HETAK1.940e-6363.795'-deoxynucleotidase n=1 Tax=Heterosigma akashiwo ... [more]
A0A1W0A6A0_9STRA3.130e-6256.385'-deoxynucleotidase n=1 Tax=Thraustotheca clavata... [more]
A0A8K1FQK2_PYTOL3.630e-6160.34Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A6G0XIE9_9STRA9.200e-6159.445'-deoxynucleotidase n=1 Tax=Aphanomyces euteiches... [more]
T0PSL2_SAPDV3.770e-5955.435'-deoxynucleotidase n=2 Tax=Saprolegniaceae TaxID... [more]
A0A7S2UUH7_9STRA8.550e-5959.895'-deoxynucleotidase n=1 Tax=Fibrocapsa japonica T... [more]
A0A0P1AY03_PLAHL2.850e-5857.545'-deoxynucleotidase n=1 Tax=Plasmopara halstedii ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1303contigF-serratus_M_contig1303:33018..41626 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score311.2
Seed ortholog evalue3.7e-82
Seed eggNOG ortholog2880.D7FVA9
Preferred nameHDDC2
KEGG rclassRC00002
KEGG koko:K07023,ko:K07198,ko:K13800,ko:K14638
KEGG TC2.A.17.3
KEGG ReactionR00158,R00512,R01665,R11891,R11892
KEGG Pathwayko00240,ko00983,ko01100,ko04068,ko04140,ko04150,ko04151,ko04152,ko04211,ko04213,ko04371,ko04530,ko04710,ko04714,ko04910,ko04920,ko04921,ko04922,ko04931,ko04932,ko05410,ko05418,map00240,map00983,map01100,map04068,map04140,map04150,map04151,map04152,map04211,map04213,map04371,map04530,map04710,map04714,map04910,map04920,map04921,map04922,map04931,map04932,map05410,map05418
KEGG ModuleM00052
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004672,GO:0004674,GO:0004675,GO:0004888,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005886,GO:0006464,GO:0006468,GO:0006793,GO:0006796,GO:0006807,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0008150,GO:0008152,GO:0009987,GO:0016020,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016773,GO:0016787,GO:0016788,GO:0019199,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0023052,GO:0030431,GO:0032501,GO:0036211,GO:0038023,GO:0042578,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0060089,GO:0065007,GO:0071704,GO:0071944,GO:0140096,GO:1901564
EggNOG free text desc.HD domain
EggNOG OGsCOG1896@1,KOG3197@2759
Ec32 ortholog descriptionHD domain
Ec32 orthologEc-14_000400.1
EC2.7.11.11,2.7.4.14
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01001,ko02000,ko03029,ko04131
Exons7
Model size1787
Cds size651
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929261.396428-UTR-F-serratus_M_contig1303:33017..340921622929261.396428-UTR-F-serratus_M_contig1303:33017..34092Fucus serratus maleUTRF-serratus_M_contig1303 33018..34092 -
1690962773.5077243-UTR-F-serratus_M_contig1303:33017..340921690962773.5077243-UTR-F-serratus_M_contig1303:33017..34092Fucus serratus maleUTRF-serratus_M_contig1303 33018..34092 -
1622929261.5231454-UTR-F-serratus_M_contig1303:41565..416261622929261.5231454-UTR-F-serratus_M_contig1303:41565..41626Fucus serratus maleUTRF-serratus_M_contig1303 41566..41626 -
1690962773.6035812-UTR-F-serratus_M_contig1303:41565..416261690962773.6035812-UTR-F-serratus_M_contig1303:41565..41626Fucus serratus maleUTRF-serratus_M_contig1303 41566..41626 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929261.4139616-CDS-F-serratus_M_contig1303:34092..342031622929261.4139616-CDS-F-serratus_M_contig1303:34092..34203Fucus serratus maleCDSF-serratus_M_contig1303 34093..34203 -
1690962773.5288002-CDS-F-serratus_M_contig1303:34092..342031690962773.5288002-CDS-F-serratus_M_contig1303:34092..34203Fucus serratus maleCDSF-serratus_M_contig1303 34093..34203 -
1622929261.4251542-CDS-F-serratus_M_contig1303:34623..346851622929261.4251542-CDS-F-serratus_M_contig1303:34623..34685Fucus serratus maleCDSF-serratus_M_contig1303 34624..34685 -
1690962773.538967-CDS-F-serratus_M_contig1303:34623..346851690962773.538967-CDS-F-serratus_M_contig1303:34623..34685Fucus serratus maleCDSF-serratus_M_contig1303 34624..34685 -
1622929261.4360352-CDS-F-serratus_M_contig1303:35126..352431622929261.4360352-CDS-F-serratus_M_contig1303:35126..35243Fucus serratus maleCDSF-serratus_M_contig1303 35127..35243 -
1690962773.5474863-CDS-F-serratus_M_contig1303:35126..352431690962773.5474863-CDS-F-serratus_M_contig1303:35126..35243Fucus serratus maleCDSF-serratus_M_contig1303 35127..35243 -
1622929261.4509618-CDS-F-serratus_M_contig1303:35727..358821622929261.4509618-CDS-F-serratus_M_contig1303:35727..35882Fucus serratus maleCDSF-serratus_M_contig1303 35728..35882 -
1690962773.5569124-CDS-F-serratus_M_contig1303:35727..358821690962773.5569124-CDS-F-serratus_M_contig1303:35727..35882Fucus serratus maleCDSF-serratus_M_contig1303 35728..35882 -
1622929261.4730508-CDS-F-serratus_M_contig1303:36162..362311622929261.4730508-CDS-F-serratus_M_contig1303:36162..36231Fucus serratus maleCDSF-serratus_M_contig1303 36163..36231 -
1690962773.5670993-CDS-F-serratus_M_contig1303:36162..362311690962773.5670993-CDS-F-serratus_M_contig1303:36162..36231Fucus serratus maleCDSF-serratus_M_contig1303 36163..36231 -
1622929261.48717-CDS-F-serratus_M_contig1303:37237..373551622929261.48717-CDS-F-serratus_M_contig1303:37237..37355Fucus serratus maleCDSF-serratus_M_contig1303 37238..37355 -
1690962773.577085-CDS-F-serratus_M_contig1303:37237..373551690962773.577085-CDS-F-serratus_M_contig1303:37237..37355Fucus serratus maleCDSF-serratus_M_contig1303 37238..37355 -
1622929261.5020957-CDS-F-serratus_M_contig1303:41546..415651622929261.5020957-CDS-F-serratus_M_contig1303:41546..41565Fucus serratus maleCDSF-serratus_M_contig1303 41547..41565 -
1690962773.5868502-CDS-F-serratus_M_contig1303:41546..415651690962773.5868502-CDS-F-serratus_M_contig1303:41546..41565Fucus serratus maleCDSF-serratus_M_contig1303 41547..41565 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1303.2284.1prot_F-serratus_M_contig1303.2284.1Fucus serratus malepolypeptideF-serratus_M_contig1303 34093..41565 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1303.2284.1

>prot_F-serratus_M_contig1303.2284.1 ID=prot_F-serratus_M_contig1303.2284.1|Name=mRNA_F-serratus_M_contig1303.2284.1|organism=Fucus serratus male|type=polypeptide|length=217bp
MSESKASPEERPAPSPSSALSFLRIVGKLKQLKRTGWIHRGVDGPESVAD
HMYRMAMCSFLVTDARLDRSRVMKLAVVHDLAEALAGDIAPFQKVTKEEK
RRLEEEGLEKICATIGSDPIAREIKELWLEYEDCTSEEARVVKDFDKFEM
IVQADEYEQGQGMDLGEFFESTAGVFTTSQVQSWDKELRAQRDNRRKDAR
SVVGPLSREDEKPSHS*
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mRNA from alignment at F-serratus_M_contig1303:33018..41626-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1303.2284.1 ID=mRNA_F-serratus_M_contig1303.2284.1|Name=mRNA_F-serratus_M_contig1303.2284.1|organism=Fucus serratus male|type=mRNA|length=8609bp|location=Sequence derived from alignment at F-serratus_M_contig1303:33018..41626- (Fucus serratus male)
ACGGCCATCTCTTTCATTCATCTCCACTACTATCCATCGCCATTACGTGT CATCTCTGACCATGTCAGAGTCAAAAGCCAGTGAGTACCGGCACTGATGC TCTGCTAGAAACTACACACATCAGTAGATCAGTAGTCCCCCCAACCTCCA AAGATAGTATAATACACAAACGACTTCATGTCCTTTGGTATGGTTCTATA TTTGGAATCCAGCAGTGCCTGACACAACTCTAATGCTGCTTCACCGAGTT ATTCCCTGTGAGCTCTATGCTAGGCACCAATCTATCCCCGCTTCAATCTA TCGCGATTACGTGCCATTTGTAACCATGTCGGAGTCAAAACTCAGTGAGT ACCGGTATTGAGGCAATCCTAGAAAAAACACATGAATCGAACCCCCAACT TCAAGGGCGCGGCTATTTACCACACATGGGTGGTTTTGTCGAACCACCAC CCAATCCAAACAGCAAGACACTTGTTTTCTGTTTTTTTTTCAATTCCGGT TGGCCAACCCGAACAATATCGCTAACACTAACCCAGACCCCCCTACCCCA GTTGACCGCGTGGTCCCAATTCATGGCTGGAGAACCAAAAAGGACAATAA AGCGGACAAAAGGACCATGTAGAGGTTTTTGTCCCTACAGCCAATGTTCC CACCTATTATAAAACTTTTGACTGATCAGAAGGTTTAGATGCATTCAGAT TTCTTTAAAAGGGGAGGGGCGCTGGGTAATAGTTTCCCTGGGTTTCCATC ACGTGCGGTGCTTGGGTGGTGGTTCGACACAACCACCCATGCGTGGTAAA TAGGCGCGGTCCAACTTCAAAATACTTTTCAGATGGTCTATATATGTTTA TAGGAAGAAGGCAAACTCTGTTTATAGGAACTCTGGGTACTATATAGTAC TCGTAGTAATGATGGTTTTGGTTGTTGTGTGTACCTTATTGTTTTGGGAA TGGCTATTTGCCCCACCGGTGGGCCATACCCAAATTTACCCCACCACCTG GATCTCGCGTCAGAAGACACGGTTGGTCACAATACATGCACGAGTGTGTT GGCGCGTTGCAGGGCTATCATGTGGTCATTCGTGCAGCCCAAACGGTCCT GTCTACGTGATGTTACGGCCGGTGGGGTGGTTGGTGTTTTCTGGTATGTA AGGGCAAATAGCCATACGTACCAGAAAATAACAACCACCCCACCGGCCGT GGTAGCACGTAGACAGAACCGTTTGGGCTGCACGATAGACCCAATAATAG CTAACCCTAACCCTAACACACCCATGCATGTACTGTGACCAACCAAGTCT TCTGACGCGAGATCTAGGTGGGGGGGGTAAACAAGAGAATAGCCCACCGG TGGGCCAAATAGCCATACCCTATTGTTTTTGTTTTAAGTTTTTCTGTAGT GTCCTTGCATGGCGATTAATGTAAATGTACAGTATAACGGTGGGCTTCTC CCCGATATTATATTGTTGACCCAATGTATCTACCATATCGGAGAACCCGT TCAAATGCCATGAAGAGGTTTTGTATTTGCAGCCTATGATCCCGCCTGAA CGTTTTGACATATTTTCCCCCCTGACTGGGTGATGCTCAGAAGGTCTAGG CGCGATCTAGTTTTCCTTTAAAAAATATTTGCTGTAGACTATATTATGTA CTACGTACTGGTACAAAACAGTAGCTCGAAAGCAACGTAGATGGTACTGT ACACCTGAGGCAATCACAAGCCTGAAAGAGAGTACACTCGAAGGAGCAGC AGCAGCAGCAGCAGCGGGGCCTATGAACATCCTCAATCATGCTTTACGAT CCGTAGACTCTACCGTCCACTTTATCACCGTGCACCATAGCACCATGGTG CGACAAAAAAGGAAAAGAGTGCCTCAGACGTACAATAAATAGGATTTTCT CTACACATCAATATTACCGTATTATATTAGACTAACAGGAAAAGGCGAGC TCAGCAGCACTCGTATTGAAGCGTGCTCGATGTCAGGAGACATTTCAACT GCGACCACCCCCCTCTGGGAGTAGGCTGTTTTCGAAAACGCCAACGATCA GGAGTGCATCTAGCGGCAAAGCCTCTACACTATTCTACAGTATTACTAGT ACTACTGTATGTAGGTGCATTTGTACAGACGATAGTCTAGATGTCACAAG CCAGTTACTAATAATATTATTTATTATGATTACATTTGTACCGAAGTACT GTCTACAGGACTATGAAAAATCTGAACGCAACTAGACTTGCCTCTGATAC TTTCGACGTGCCCACTTCATACGAATAGTGGGTGTGAAGAAAGAAGGCGC ACGTTAATTGGTCATAGTCCATGGCGACCTGCAAAGGCGGCACCCGTTAC TGGAACTAACTTGAGGACTACTGGCCCTGTGCTGGTGGGCTCTCGGTAGT GAACGCCATCGGTACGCAACTGCGTAACCCGATAAACTCGGGACTGACCC GATGGCGTAAGGCGGTTTTAATAAATAAATGGACACCGCCGCAGAAATCG GGAGGAATCCCGTGAGTAAGCACCAGATTCAGCCTGAGTGTGGAGAATGA GCAGGCTGACGCGAGACGGGACAGTCGAACCCGTGTGGTGAGTCATTAGG CACGAACGGGGATAGACAGGGAAATATTTATTTTCTCTGTTCAATTGACC ACGAGCATCATAGAGCAGGATTGGCAACCTTACCCGGTTGATCCATACTC AGCTTTATGTTATGACGATACATACATCCACACATCCATCTTTGTCCACA CCGTCCGGGGGAAACATTGTGTCGAAAGGTTTGATTGGGAACATTCATTG GTTGTTTGAACAAAAACTCGAAATGCGGTTCTTGTTGGGCTCGCCAATGG TAGTCTGGTAGTCTCAAAGGGTCAACGGTATATTATCGGGGAGAGACCCA CCGTCTTACTACTGTGCCTTGCATTAATCGCCGTGTTGAGTTTTGGGTTA GATCGCTATTGGCGAAGCGGTGGATTTGTTGAGTAGTTTAATACTAGGTA GCATTGTTTTCTTTCTACTGATAAAGGTTAGGCTACCAACAGAATCTCCA GCTGAAAACCCAGACAGGCGTACAAATATATTAGTCGCCAAAATAGGTAC TTACTGTAACACTAAGTATGTATCGATACATCGGTGAAGTGAGGAAATAA GTAACTGTTATTACTCTACCCTTCCCGCCGGTACTTTGAACATGCCCACT TCATACCAATAGTGGGTGTGGGAAAGAGAGGCGAATATTAATTGGTCCAT GGTGACCTGCCAAGGCAGCACTCGTTCGGAACTACCTTGATGTTTACTGG CCCTGTGCCGGCGGACTCTCGGCAGTGAACGCCATCGGTACGCAACTGCG TGACCCGATAAACTCGGGACTGACCCGATGGCGTATGGCGGTTTCATAAA TGGACGCCGCCCCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATT CAGCCTGAGTATGGAGATGAGCGGCTGACGCGGGACGGGACGGCTGAACC CGTCTCGCGACACCAAATTCTCAGGCACGCACGGGGACAGGGGAATATTA TGTTTCCTTATTCAGCTGACCACGAGCAGGATTGGCAACCTTACACGGTT GATCCATACTCTGCTATATGTGATGACTATACATACATATACATACATAT CCTTGCATGTATGTATGGTCATCCTCCTGAATTCCGCGGCGGCGTCTATT TATTTATTTTAAACCGCCATACGCCATCGGGTCAGTCCCGAGTTTATCGG GTCACGCAGTTGCGTACCGATGACGTTCACTGCCGAGAGTCCGCCGGCAC AAGGCCAGCAAACCTCAAGGTAGTTCCGAACGAATGCTGCCTTGGCAGGT CATCATGGACTAATTAATATGCGCCTCTCTTTCCCACACCCTCTATTGGT ATGAAGTGGGCGTCTTGAAAGTACTGGCGGAATGCCATCAGTATCACCGC GTATCACCTGCCAAACACTATAGAAGATTGATAAGAAGCAGAGGTTCGTT GTGTACCATATACCATATACCATATAAAAGGTACTACTTTGTACTGTTAA TACGTAGTCTAGTGATACAAAACTATTAATACTATAGTCGTACGGATGCT TGCCGGAATCCTTATTTTGTTGCTGTATTTTCCCCTCTCGGCCGAATCTG GTAATTGCACTACTACTTTGACAATTTTCCCCCTGAAGGTGGATGCTCAG AAGGTTTAGATGCGTCTAGATTTTTCTTAAACTACAACTACTGCACAAGA AATAAACGTGCCGCGTCTCAGGTCCCGAAGAGAGACCGGCACCTTCCCCA TCCAGCGCCCTCTCCTTCCTCCGAATCGTTGGCAAGCTGAAACAGCTCAA GAGGACAGGATGGATACACCGAGGAGTGGACGGGCCCGAGTGAGTCAGTC GCTTACCCCTATTGTGCTATACGATAATATTAATTCAGACTACTACTTCC ACAGTACTTGTGACTGGTCCGTTCCCGCCCTACTCCAACCTCTATGCAAC AGACCGTTGGGTGAAAGCGTAGTCGTACTGCACAGCCAGATACTTGATGC TGATACCAGTACTATTTAGTAACTGCTGCACCGTACTGGATTGGCACGTG GTAAAGTTTCCGGCTTCAGTTGAAACCAATACTACTCAAGCAGGCTGCAA TATTGTCTCGTTCTCTAGATCTAAAGTATACCCCACTTTCGATACTATTA ATAGTTCAGAGAGCTTTACATGCCCACAGCCAGCCTCCTTGAAACTCGAG AATACTGCCGCAATGGAAGGTACTGCCGCAGCAGCAGTTATTTGCTGATG GTATTAACAGAGCCGTAAAGGGCAAAGTGAGCGTGCGAGTTGCAAAGTTT TTTCGCAATCCTGAGCCTTTGTTTTGGTGGAGAGTTAGTTGAACCCCCTG CATTGGATGCCCGGTTACATAGCCATCCATTTATGTGGCAGAAATGCCAC GCCTAACCTCTCTTGCAGCATTTCCCTTGCTGAGTCATCAAAGCCAAAGT CGAAATAACAGATACCCGTACACTAGCGTAACGCCACACTAGCCTTGCTG AGTCATCAAAACTGTAGTCGAAATAACAGGGGATGCTCAGAAGGTCTAGG TGCGTTCTGTATTTTCTTCAAACAGGTACTGATATACTGATGTAACGCCT TCGTGGGGTTTCCCGATCTGCTCCCTTGAATCACAAAATATTAATATGAA ATAGATAAACGGCGTTACCGGCCGAGGTTTCCACGTAGCGACCCAGAAGA ATTTGCGATAGTCGGAACTTCGACTGAGTGGTCGAAAAGCTGACTCGATG GCGTTGATCGAGACACGAAAAAGATCGGCAATGACACCAGGCCTTTTGAA TGGTACACTTGTTTCTCCCTTCTTGCTATTCTTGCTATGGAACAGGTCCG TAGCGGATCACATGTACCGAATGGCGATGTGCTCCTTTCTTGTGACGGAC GCAAGGCTCGACCGGTGAGCCAATCGAAAATCACCGCAAGTGGCACGAAC CTCCTTCATACGGTTTGTACTTAACTTCTGGTACTGTCTACAAAATGGAA CGGGTACACTTCGAACGGGCCACGCCCTTGATCCATGACGCTGGCCTTAT GATAACAAAACCTATTTGTGGAACAATCTCCTTTTTACAGTAGTAAGGCT TGGAAATCTGAACGAGAGGTCCTCTCGTGAAAAGAGCTAAGTCGTGATCG TATATACTATTGAGGCTTGCTGGCAAATGCTGTTTGCACGGCAGGTCTCG CGTGATGAAGCTAGCGGTGGTCCACGACCTCGCGGAAGCCTTGGCGGGAG ACATCGCCCCTTTCCAGAAGGTAACCAAGGAAGAGAAGCGTCGACTGGAG GAGGAGGGGCTAGAGAAGATTTGTGCCACTATCGGGAGTGATCCTATCGG TGAGGGACCGCTACTTGACGCTCTTGGGAGCGCGTGCCAAATTCTTCATG CATTCAGTGTCAGTGATTGATAATGATAAGACAGTCAGTGCAAACCCTGC TGCTTGCCGGGATCACACGTGCCCGTGATACGTTGAGTGCTTGACGCTCC TTACCCGCCCTTGCTATTAGAGCAACATTTTGGAGCAGTACAGTATAATA AATCATTTGCAACGCGGAGTACACCGACCGCACTGCGGTAATGCACACAT CCCTCCACTGCGGCACTAAGAAGTCTCGATCTGTTGTCATATCATATTAC TTACTGTATCGGTGATTTGCGCCTCGCCCCACCAAAACAAACAGAGGATA AATCGATTGTGTACCAAACATTAGCAGGCCGATCCTCCCTGTGGTCAAGC TTCGTTGGAGATCTCCTGGGGGAAGGTAGTGCCGCGGTTCCCCGCTCAAT CCGTCGAAACATTGTGTTGCGTTTTCGCGACAGCGCGTGAGATCAAGGAG CTGTGGCTTGAGTATGAAGACTGTACGTCCGAGGAAGCTCGAGTAGTGAA GGACTTCGACAAGTTCGAGATGATCGTTCAGGCGGACGAGTATGAGCAAG GTGGGTTCGAAAAATCACACGGTCGCCAAATGTGATCGTCTTTCGTTTTT TTGGCGACAGCGAGAGAATCCCGTAGCTTTTGTGTGATGAACAATTCCTG TAGTTGGCACCAGTAACGACGTAGCTTTCATGAAATTATTATGTCTTCGT TTAAGTAGGCTCGCAAAGATCCCCTTATTCCGGACGCCAGATACTAAGTT TTTCCTTGCCGTCCACCACTACACACACCATCGTACCAACGCGTATCTTA CCAGGTGAGGAATAGTGAACTGACATTTTTCGACCATGTTCATTCTCTCC TGTTGACATGATGAACATTTGGATCTACCGAAACACTCCGGATAGCAGCG TCCCCTCGGTAATGGCTTTGAAAAACTCACCCACATCGTTAGAGCTACAC ATAGCCCTTGCCTTTTCCGGTTGTGTCGTCGAACGTCTTAGGTCAAGGGA TGGATCTAGGAGAGTTCTTCGAGAGCACGGCAGGAGTCTTTACCACCTCT CAGGTAACGGTAATCATTTCTTAGAGCTGAGTTCTAATAAACGAAGCCTT TTCTAAAGCAGGAGGAGTTGACCTTCCGTGTCGCTGCTAGTGTCTATAGC TGCTACGCACGTTCGCCCCTGAGGACCTTGAACGAAATATTCTGAAGTGT CTGGCCTCTGAAGGATCTAGCCTCTAAAGGACGATCTCTAAAGTGTCTTG GTGATATCTTAAAAAGCTTCGCCATGTCCGTTTGGCTGAAATGCTTGTAG CTGCTGGCGGCGCGCACCGCTCTATTGGCAACAAGAAGAAGCTCAGTGCT CGGCCTTGCTCAACTTTGCTTTATACCGGTACTCCTTCGCAATAGTCTCA TGTAAACGTGAGGCGCAACGTGTAACTTGGTTCCGCACAATGTTGCGCAC AACATGTCATTCTTTTGGTGCAGGTACAATCGTGGGACAAGGAACTTAGG GCTCAGAGGGATAACCGCCGAAAAGACGCCAGAAGCGTGGTGGGGCCGCT ATCAAGGGAAGACGAAAAACCTAGCCATTCATGACTACATGTTGTCTATG CGCGTGTTGCTTACTTTGCAAGCATCCAGAGATGCTCGTTAAAGTGACGT TTGATCAAGGTTGTGAATTTGCAAGAGACAATATACTCATATTGAAGGCG CGAAGGCGGCGTGTTTTATCGTGCTCCACGAAGCTCGAGCGATCTAGTCC TTAGACGGTCTACCATCGTACCAGCGTCCCGTGCCTTGGCGGTGGTATGT GTGGAGAGTACGTACCCACTGCATTGCTCAACAGAAGAAACACCTTGAGT AGCGTGTCTGGTCAATTGAGGGATCGCGATACCTATCGAGGCTTCGAACG ATCTAGTTCTTAGACCGTCTAGCATCGTACCAGCATCCCGTACTTTGGCT GCGGTGCATGTGAAGAGTAACCACCTAATGTTTGCTCAACAGAACGTGGC GTCTTGAGTGGCGTGTCTGGTCAGTTGAAGAATCGTAATACCTGTCGCTA GGAGTAAGGTTATGAGTGGCAGTTTCAACGGGTGCAATGCCCGCACGCTC TACCACAAGTATCATCTCTAGTGAAGCCTGCCAGAACTCGGGGCCATCTT TGACCTCTTTAAGGCGTAAAACCGGGGTAGACATGAGGCGAACTTCGCTA GTAACGTCGTCACGTTTGATTAGGCTATCGCCCTGCAGCTGAGGTCATAC CCCGTTCCACCTGCCACCCTTAATCAAGCCCGTCCTCGGCTTTGCTGCCC TGCCCCAGCGCTGTCTACTTTATATCTACGCATGCGGCGCGAGTCGCTTG GTTGCTGTTACAATATTCGCCTCAGGTCTCTGTGTACAGTGTAATGCCAG GAGGAGAGACAACCTCGTAATATCCTCCTGATGCAGATGAGGGATGCGAA GAGCACCTCGATCGCCTCCGCAGCTTTGCAAAGCTCATTCACTGAGTGGC ATAGCTGCGTCTGCAAGGATACTGACTGGCCCAGAAACATCGCTTTATCA TCTTGCGCCTTTTCGAGCTCGCGTTTTTTCTCCTCTTACAATTCGCTGCA ACACCAGAAGCAAGTGTGCGTTTTACTTTTTCAAGGAAAGAGCTTTCAGC CAGAAAAAG
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Coding sequence (CDS) from alignment at F-serratus_M_contig1303:33018..41626-

>mRNA_F-serratus_M_contig1303.2284.1 ID=mRNA_F-serratus_M_contig1303.2284.1|Name=mRNA_F-serratus_M_contig1303.2284.1|organism=Fucus serratus male|type=CDS|length=1302bp|location=Sequence derived from alignment at F-serratus_M_contig1303:33018..41626- (Fucus serratus male)
ATGTCAGAGTCAAAAGCCAATGTCAGAGTCAAAAGCCAGTCCCGAAGAGA
GACCGGCACCTTCCCCATCCAGCGCCCTCTCCTTCCTCCGAATCGTTGGC
AAGCTGAAACAGCTCAAGAGGACAGGATGGATACACCGAGGAGTGGACGG
GCCCGAGTCCCGAAGAGAGACCGGCACCTTCCCCATCCAGCGCCCTCTCC
TTCCTCCGAATCGTTGGCAAGCTGAAACAGCTCAAGAGGACAGGATGGAT
ACACCGAGGAGTGGACGGGCCCGAGTCCGTAGCGGATCACATGTACCGAA
TGGCGATGTGCTCCTTTCTTGTGACGGACGCAAGGCTCGACCGGTCCGTA
GCGGATCACATGTACCGAATGGCGATGTGCTCCTTTCTTGTGACGGACGC
AAGGCTCGACCGGTCTCGCGTGATGAAGCTAGCGGTGGTCCACGACCTCG
CGGAAGCCTTGGCGGGAGACATCGCCCCTTTCCAGAAGGTAACCAAGGAA
GAGAAGCGTCGACTGGAGGAGGAGGGGCTAGAGAAGATTTGTGCCACTAT
CGGGAGTGATCCTATCGGTCTCGCGTGATGAAGCTAGCGGTGGTCCACGA
CCTCGCGGAAGCCTTGGCGGGAGACATCGCCCCTTTCCAGAAGGTAACCA
AGGAAGAGAAGCGTCGACTGGAGGAGGAGGGGCTAGAGAAGATTTGTGCC
ACTATCGGGAGTGATCCTATCGCGCGTGAGATCAAGGAGCTGTGGCTTGA
GTATGAAGACTGTACGTCCGAGGAAGCTCGAGTAGTGAAGGACTTCGACA
AGTTCGAGATGATCGTTCAGGCGGACGAGTATGAGCAAGCGCGTGAGATC
AAGGAGCTGTGGCTTGAGTATGAAGACTGTACGTCCGAGGAAGCTCGAGT
AGTGAAGGACTTCGACAAGTTCGAGATGATCGTTCAGGCGGACGAGTATG
AGCAAGGTCAAGGGATGGATCTAGGAGAGTTCTTCGAGAGCACGGCAGGA
GTCTTTACCACCTCTCAGGTCAAGGGATGGATCTAGGAGAGTTCTTCGAG
AGCACGGCAGGAGTCTTTACCACCTCTCAGGTACAATCGTGGGACAAGGA
ACTTAGGGCTCAGAGGGATAACCGCCGAAAAGACGCCAGAAGCGTGGTGG
GGCCGCTATCAAGGGAAGACGAAAAACCTAGCCATTCATGAGTACAATCG
TGGGACAAGGAACTTAGGGCTCAGAGGGATAACCGCCGAAAAGACGCCAG
AAGCGTGGTGGGGCCGCTATCAAGGGAAGACGAAAAACCTAGCCATTCAT
GA
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