mRNA_F-serratus_M_contig1301.2276.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1301.2276.1
Unique NamemRNA_F-serratus_M_contig1301.2276.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: D8LJJ7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJJ7_ECTSI)

HSP 1 Score: 558 bits (1437), Expect = 1.800e-185
Identity = 312/533 (58.54%), Postives = 367/533 (68.86%), Query Frame = 2
Query:  449 SLLEKYLYRETVRREIEEEHLPELPEFLESIGLQHRLQDFYRKSVFETKYLLTVNEMDLRLMSLSPDEVRGVQASVAKLRVEREVTEERMHPLLVRRNELTYGRLFVDRSASSYEFYLAGFGPPAPVDMAPLVWAKPRNACQTSTDPELA-GAIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVAATLGGRSGGEPEPKGPQGMATVMVRGSTLPSLSKALEW------GPTTATLVPLECKPGKAACEAVLPEEREADKQVDSGIIIVTS-----------------KEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSEETIRAIDDSL----------------SVGGATVLVRRGECSFGDKAKNIQDAGGRVMVVQDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGVTRWPATSLLEARVLARQLKAKHSGSRCRLLWIEDKAREVERSLLQYSTDDD 1927
            SLLEKY +RETVR  IEE+ LPELP+FLE IGL  +L+DFYRKSVFETKY+ T+N+MDLRLM LSP ++  V+    +LRVER+VTEER+HPLL RRNELTYGRLF+DRSASS+EFYLAGFGPP PVD A L+WA+PR+AC T T+ EL  G IVLAERG+CSFV KAN VASSNA ALVVINNG +GE+LFRVAATLGGRSGG  EPKGP+ M TV+VRGS LPSLSKALEW      GP T  LV L+CKPG+AACEAVLPEE++A+KQVDSG I + S                 K AA   N    +FEFLSATFG TLP G   VV SVP +AC  ++                            V    VLV+RG CSFG KAKN+Q+AGGRV++  DN LGVLQNVGA D LAKEL++PGVF+T RAG+ LV+A     N    +      P+ +T  +EPDN + RAW +LG T WP   LLEARVLARQL+A H+ S CR  W++DK R  E       T  D
Sbjct:   75 SLLEKYTFRETVRTVIEEDQLPELPDFLEEIGLGDKLEDFYRKSVFETKYIFTLNDMDLRLMGLSPADIATVKQHAEELRVERDVTEERLHPLLQRRNELTYGRLFLDRSASSFEFYLAGFGPPVPVDEASLIWAEPRDACGTLTNSELLPGTIVLAERGRCSFVDKANTVASSNALALVVINNGPEGEDLFRVAATLGGRSGGGEEPKGPENMPTVLVRGSALPSLSKALEWTANGDGGPVTTRLVALDCKPGRAACEAVLPEEQQAEKQVDSGKITIVSGLPASPPSSAAQGVDAAKGAALSANASGASFEFLSATFGATLPRGHVSVVPSVPEDACQPIAXXXXXXXXXXXXXXXXXXXXXXXXXXXGVAPVAVLVKRGACSFGVKAKNVQEAGGRVIIFHDNGLGVLQNVGAPDPLAKELFIPGVFVTARAGDSLVAAN----NNNNGQDGKGMGPLAVT--FEPDNAIGRAWGALGATHWP-NDLLEARVLARQLRATHASSPCRTKWVDDKVRRAEGLPTDAGTPSD 600          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A7S2SG82_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SG82_9STRA)

HSP 1 Score: 224 bits (570), Expect = 6.400e-61
Identity = 156/483 (32.30%), Postives = 240/483 (49.69%), Query Frame = 2
Query:  476 ETVRREIEEEHLPELPEFLESIGLQHRLQDFYRKSVFETKYLLTVNEMDLRLMSLS----PDEVRGVQASVAKLRVEREVTEERMHPLLVRRNELTYGRLFVDRSASSYEFYLAGFGPPAP---VDMAPLVWAKPRNACQTSTDPELAGAIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVA---ATLGGRSGGEPEPKGPQGMATVMVRGSTLPSLSKALEWGPTTATLVPLECKPGKAACEAVLPEEREADKQVDSGIIIVTSKEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSEETIRAIDDSLS-VGGATVLVRRGECSFGDKAKNIQDAGGRVMVVQDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGVTRWPATSLLEARVLARQLKAKHSGSRCRLLWIEDKAREV 1891
            ET   E+ E+ LP +   LE + +      FY     ET+Y+L + +MD R+M+L      D +  V+ ++   ++ER V +    PLL  RN L YGRL ++ S +S+E++   F  P P   + +A L W    +AC   ++   AG  V+A RG CSFV KA N+++S A A++++NN  +   LF +A   AT GG    + E   P  +  VMV+     +L KA+  G     +VPL+C  G   C+ +LP+E++   +VDSG++     +            EFL+ T+G  +P G    V + P + CS        A+ +S+S V G  VLVRRG CSFGDK K  QD G   +VV D     LQ +G S     ++ +PG  +T  AG+ L  AA  G                L + ++    +  +W  L +T WP T   +  ++ RQL  K++ S  R+ W+  K  E+
Sbjct:   47 ETQEMELVEDGLPTIDALLEELDMSDLTAKFYEAGFTETRYVLRMKDMDFRMMALEWGVEKDAILRVRDAIKNYKIERPVVKIEEDPLLKERNALRYGRLVINGSTASFEYFSGYFSAPMPRKSLSLA-LAWDNNSHACDLKSE-SAAGEAVIAHRGGCSFVEKAWNISASGAQAMILVNNASN---LFHIASGYATGGGNLNNDTE--APSNLTVVMVKHYAFSALRKAIAVG-ADVRMVPLKCTSGDVKCQPILPDEKDIVLEVDSGVVEQVGSDIQ---------HEFLTGTWGGIIPAGDVPTVAADPIDGCS--------ALQNSVSDVTGRVVLVRRGRCSFGDKVKAAQDRGAAAVVVADLPGHALQRMGVSTPQLADMEIPGFVVTAAAGDSLFEAAQTGG---------------LQLRFKQQPGMTESWLELSLTSWPKTEK-DFNMVFRQLSQKNAHSAERVQWLHSKRGEL 488          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A7S1UBI5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UBI5_9STRA)

HSP 1 Score: 193 bits (490), Expect = 1.800e-49
Identity = 153/469 (32.62%), Postives = 218/469 (46.48%), Query Frame = 2
Query:  503 EHLPELPEFLESIGLQHRLQDFYRKSVFETKYLLTVNEMDLRLMS----LSPDEVRGVQASVAKLRVEREVTEERMHPLLVRRNELTYGRLFVDRSASSYEFYLAGFGPPAPVDMAPLVWAKPRNACQTSTD-PELAGAIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVAATLGGRSGGEPEPKGPQGMATVMVRGSTLPSLSKALEWGPTT-ATLVPLECKPGKAACEAVLPEEREADKQVDSGIIIVTSKEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSEETIRAIDDSLSVGGATVLVRRGECSFGDKAKNIQDAGGRVMVVQDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGVTRWPATSLLEARVLARQLKAKHSGSRCRLLWIEDKAREV 1891
            +HLPE  +FL+  GL+     F  + V   +Y L + + DL +      L  D++R +   + +L V + + EE   PLL  RN L  G+L +    ++Y+FY A FG   P+   P+   +P N C T  +  EL  AI +  RG CSF+ KANNV+ +   AL+ +N+ +   +LFRV+A     S  +P           +V       L  AL+        LVP++CK G A C  +LPEE+E    VDSG +       AG    E    EFL++TFG  LP     ++       C  LS      + D     GA VLV RG C FGDKAK+ QDAG R +V+ DN    L     +    +++++PG+ +T  AGE L+      A                 +E  P    A+AW  L    WP           RQLK +H  S  R  WI+ KA+EV
Sbjct:   96 DHLPEFEDFLKDEGLEDLYPKFLDQGVHNMQYFLRLKKNDLSIWGMDWGLKLDQIRYLMKRIEELTVIKIIEEEEEDPLLKLRNSLHNGKLSLRHGVANYQFYKAFFGGHLPMKELPVKLVEPLNGCSTPENLAELKDAIAVVSRGDCSFIDKANNVSLAGPGALLYLNSDN---QLFRVSAGHITNSKEDPNENTGIEFGVGLVTHEATGVLKAALDAQEEVFGQLVPVQCK-GAAECAPILPEEKEVVPYVDSGYL-------AGDGLDE---IEFLTSTFGMPLPTQALPLLQPSNPQGCEALSAPEGGDVSD---FAGAWVLVARGGCPFGDKAKHAQDAGARGIVIMDNGDAPLARFATN---REDVFIPGLMVTKAAGEGLIDWLGTVAE--------------AKVEVVPSPGAAQAWLDLAALEWPEEKAQINLFKKRQLK-EHGDSPDRQAWIKAKAKEV 529          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A7S2UVF2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVF2_9STRA)

HSP 1 Score: 154 bits (390), Expect = 1.240e-37
Identity = 105/299 (35.12%), Postives = 158/299 (52.84%), Query Frame = 2
Query:  494 IEEEHLPELPEFLESIGLQHRLQDFYRKSVFETKYLLTVNEMDLRLMSLSPDEVRGVQASVAKLRVEREVTEERMHPLLVRRNELTYGRLFVDRSASSYEFYLAGFG--------PPAPVDMAPLVWAKPRNACQTSTDPELAGAIVLAERGKCSFVVKANNV-ASSNASALVVINNGDDGEELFRVAATLGGR---SGGEPEPKGPQGMATVMVRGSTLPSLSKALEW----------------------------GPTTATLVPLECKPGKAACEAVLPEEREADKQVDSGIIIVTS 1270
            IE+EHLP L + L+ + + H   +       ETKY++ + +MD+R++  S DE++ V+ ++A LRV +    ++  PL  +R  L YGRLFVDR   S+EF  A FG        PP PV   P+V+A+P  AC    +    GA+V+A RG C+F+ KA NV ASS ASA++++++    EEL  VA+T G       G  + K PQ +A  M+R S LP L ++LEW                            G     +VPLECK G+  C  VL  E++    V++G + +++
Sbjct:   51 IEDEHLPPLQDLLQDLRMTHHYDNLINSGYDETKYIMKMKDMDMRVLDFSKDEIQRVKDAIADLRVVKVKEVKQEDPLQKKRAALKYGRLFVDRFPQSFEFIPASFGAAMPIPQQPPGPVGR-PIVFAEPFEACGPLQEGIPVGALVVAGRGTCTFLEKAQNVSASSLASAMLLVSHD---EELIAVASTHGTSVRVEEGGVDLKVPQNLAVAMIRASALPLLKQSLEWANEDQAAVELAAKQAKKTSVVQKKGDAPGGLRGNMVPLECKAGRTDCLPVLEAEKKLAPHVEAGTLSIST 345          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A7S1UDY4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UDY4_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.410e-34
Identity = 122/368 (33.15%), Postives = 166/368 (45.11%), Query Frame = 2
Query:  794 FYLAGFGPPAPVDMAPLVWAKPRNACQTSTD-PELAGAIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVAATLGGRSGGEPEPKGPQGMATVMVRGSTLPSLSKALEWGPTT-ATLVPLECKPGKAACEAVLPEEREADKQVDSGIIIVTSKEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSEETIRAIDDSLSVGGATVLVRRGECSFGDKAKNIQDAGGRVMVVQDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGVTRWPATSLLEARVLARQLKAKHSGSRCRLLWIEDKAREV 1891
            FY A +G   P    P+   +P N C T  +  EL  AI +  RG CSF+ KANNV+ +   AL+ +N+ +   +LFRV+A     S  +P           +V       L  AL+        LVP++CK G A C  +LPEE+E    VDSG +       AG    E    EFL++TFG  LP     ++       C  LS      + D     GA VLV RG C FGDKAK+ QDAG R +V+ DN    L     +    +++++PG+ +T  AGE L+      A                 +E  P    A+AW  L    WP           RQLK +H  S  R  WI+ KA+EV
Sbjct:    1 FYRAFWGDLLPRRGRPVKLVEPLNGCSTPENLAELKDAIAVVSRGDCSFIDKANNVSLAGPGALLYLNSDN---QLFRVSAGHITNSKEDPNENTGIEFGVGLVTHEATGVLKAALDAQEEVFGQLVPVQCK-GAAECAPILPEEKEVVPYVDSGYL-------AGDGLDE---IEFLTSTFGMPLPTQALPLLQPSNPQGCEALSAPEGGDVSD---FAGAWVLVARGGCPFGDKAKHAQDAGARGIVIMDNGDAPLARFATN---REDVFIPGLMVTKAAGEGLIDWLGTVAE--------------AKVEVVPSPGAAQAWLDLAALEWPEEKAQINLFKKRQLK-EHGDSPDRQAWIKAKAKEV 333          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A482SVK7_9ARCH (PA domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVK7_9ARCH)

HSP 1 Score: 148 bits (374), Expect = 4.910e-34
Identity = 128/470 (27.23%), Postives = 219/470 (46.60%), Query Frame = 2
Query:  509 LPELPEFLESIGLQHRLQDFYRKSVFETKYLLTVNEMDLRLMSL-----SPDEVRGVQASVAKLRVEREVTEERMHPLLVRRNELTYGRLFVDRSASSYEFYLAGFGPPAPVDMAPLVWAKPRNACQTSTDPELAGAIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVAATLGGRSG-GEPEPKGPQGMATVMVRGSTLPSLSKALEWGPT--TATLVPLECKPGKAACEAVLPEEREADKQVDSGIIIVTSKEAAGVRNRESETFEFLSATFGTTLPLGLT-EVVLSVPRNACSRLSEETIRAIDDSLSVGGATVLVRRGECSFGDKAKNIQDAGGRVMVVQDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGVTRW---PATSLLEARVLARQLKAKHSGSRCRLLWIEDKA 1882
            LP L E LE + +   L+DF R  + ET+ LL ++ MD +LM++     S + V  +++ +  L     VTE++  P +  RN+LTYG++ +     ++E+ LA FG   P+    L  +     C      +  G  V+A RG C+F+ KA       A  L++IN+ D   +L   A+ LG      E   K       + +  +T  +LS+A+++      A +VP++C+ G   C  +L EE++   +V  G + V    A+G    ++++F+FL++  G  LP+G    + L+ P +AC+ L   T        S G   +L  RG+C F  K    Q AG RV+VV D     LQ +GA       L +P + I+  AG+ + SA +                V + +    D +   +W  +    W   P   L++   L ++ + K+S     + W++ +A
Sbjct:   94 LPPLQEVLEEMQITPFLKDFVRMGITETRLLLRLSSMDFQLMTMEWTNFSYEHVSKLKSKIVDLTKMATVTEDKNRPEIEMRNKLTYGKVILPHGVQAFEYSLASFGTSPPIGPVHLRLSADGLECDKEHSADYTGHFVVARRGNCTFLSKAQTAFQHGAQGLIIINSED---KLDSPASGLGIDGNITEAMVKALDSFVVLGMSNTTWEALSRAVQYAENHLPAHIVPIKCQTG-GRCLPLLDEEKKLQTEVSWGRMRVRMP-ASG----QAKSFDFLTSIIGAPLPVGQDLPLFLADPIDACAALPNVT--------SSGSVALLAHRGQCRFDTKVLGAQQAGARVLVVVDIEDQALQRIGAVAPEVGYLGIPSILISAEAGDFIRSAPS--------------EQVWIDLVPSADTSGFDSWIEVAYMDWAEHPQERLMQIEGLVKKYQDKNSQDL--VSWLQRRA 530          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A7S2XWG7_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWG7_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.480e-23
Identity = 69/202 (34.16%), Postives = 106/202 (52.48%), Query Frame = 2
Query: 1298 ESETFEFLSATFGTTLP----------LGLTEVVLSVPRNACSRLSEETIRAIDDSLSVGGATVLVRRGECSFGDKAKNIQDAGGRVMVVQDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGVTRWPATSLLEARVLARQLKAKHSGSRCRLLWIE 1873
            E    +FLS+TFG  LP          +   EVV+S P  AC  L       ++     G A V+ R G C+FGDKA N+QDAGGR+++V DN+   LQN+ AS   +  L +P V +T  AG+ L+  A++   + +           +T++ +P N VA  W  L   +WP   + + R+L+R+LK  + G+  RL W++
Sbjct:    3 EVRDLDFLSSTFGGMLPGAGSYVGDVPVPQLEVVVSDPLEACGPL-------LNMDKVKGKAVVVKRGGGCTFGDKAVNVQDAGGRMVIVVDNTPSALQNIAASSEQSTNLVIPAVMVTQLAGDWLIKEASSSLAKAQP----------ITLKLDPANEVAYRWMELATVQWPDDEI-QRRILSRRLKEANRGAPDRLDWLD 186          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A329REQ3_9STRA (Uncharacterized protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A329REQ3_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 3.080e-7
Identity = 89/383 (23.24%), Postives = 157/383 (40.99%), Query Frame = 2
Query:  743 ELTYGRLFVDRSASSYEFYLAGFGPPAPVDMAPLVW---AKPRNACQTSTDPELA-------GAIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVAATLGGRSGGEPEPKGPQGMATVMVRGSTLPSLSKALEWGPTTATLVPLECKPGKAACEAVLPEEREADKQVD--SGIII-VTSKEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSEETIRAIDDSLSVGGATVLVR--RGECSFGDKAKNIQDAGGRVMVV--QDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGV----TRWPATSLLEARVLARQL 1828
            E T+GR+++    +  +++   FG P         +   +K R  C+   +PEL         A+++ +RG+C+F  KA       A+AL+V++  DD   +    ATL        +      +A++M+R +    L  A E       L+P+ C+     C+     E +  +     SG+++ V  KE     +  S    FL+AT+G+ LP  ++   L+ P +     ++ T      S   G A V+     G+CS  +K  N Q  G  V+V+  QDN+  + Q        A  + +P + ++   G  L S   +     R             + +   N +A AW  L      + WP      ++ LA+ L
Sbjct:   33 ESTWGRIYLRNGLAPIQYFRDDFGGPMTPHEVSFYFPKRSKNRFGCELLPEPELLEIEAANRSAVLVVDRGECTFERKALVADQMGAAALLVVSPTDD---VSGPVATL--------KNDDDISIASIMIRRTAGDMLRIAAEQMTIYGRLIPMTCERKPYTCKPRYEFEGDYMETAPARSGLVLSVDGKE----EDDGSHLGSFLAATYGSILPTKMS-FPLAAPLDGSQACTDATEDTTTQSEFAGKAVVVPAGLAGKCSEFEKVSNAQRRGASVVVLTQQDNATLMTQPGVQVSWHAYNITIPVLAVSSTTGANLASLKDSQGEAVR-------------LRFAVSNGIADAWELLEKYSTRSAWPKRVKRCSKTLAQLL 386          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A1V9ZKI5_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZKI5_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.370e-7
Identity = 87/364 (23.90%), Postives = 147/364 (40.38%), Query Frame = 2
Query:  752 YGRLFVDRSASSYEFYLAGFGPPAPVDMAPLVWAKPRN--ACQTSTDPELA------GAIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVAATLGGRSGGEPEPKGPQGMATVMVRGSTLPSLSKALEWGPTTATLVPLECKPGKAACEAVLPEEREADKQVDSGIIIVTSKEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSEETIRAIDDSLSVGGATVLVRRGE-----CSFGDKAKNIQDAGGR-VMVVQDNSLGVLQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAW----ASLGVTRWPA 1789
            +GR+++       +++   +G    +  A   +  P N  AC    D ++        AIV+ +RG+CSF  K+ +   + A+ +++++     EE  R  A +          KG   + TVMVR S    +  A         LVP+ C   K+ C   +  +      V  G++ +           +  TF+FL+A+FG  L      V ++ P +AC+ L+        ++  V G  VLV+  +     CSF  K    Q AG   V++VQ + + V+         A  + +P V +T   G  L    A                VRL    E D+ V  AW    + + +T WP+
Sbjct:  989 WGRIYLRDGLLPIQYFKDSYG--GDIFPAEHEFVLPTNNLACTPFDDSDVVRITNATAAIVVVDRGECSFETKSKHAQDAGATGVIIVSTT---EEAVRPVAHVA---------KGEIRIPTVMVRHSAGDLIRAAAAREAVYGKLVPMVCP--KSICGPAMETDTIFMHTVRGGVLSL----------EDGTTFDFLAASFGGPLIKRPLTVAVAAPSHACTPLT--------NAAEVEGKAVLVQLDDAAGSNCSFLAKVSEAQVAGASAVILVQRSHVAVVSPAVEEAWTAYNITIPTVMVTHTTGSVLELRPA--------------DEVRL----ESDDRVVDAWDVIHSLVDLTNWPS 1300          
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Match: A0A662WZT3_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZT3_9STRA)

HSP 1 Score: 63.5 bits (153), Expect = 9.350e-7
Identity = 87/380 (22.89%), Postives = 147/380 (38.68%), Query Frame = 2
Query:  743 ELTYGRLFVDRSASSYEFYLAGFGPPAPVDMAPLVWAK---PRNACQTSTDPELAG-------AIVLAERGKCSFVVKANNVASSNASALVVINNGDDGEELFRVAATLGGRSGGEPEPKGPQGMATVMVRGSTLPSLSKALEWGPTTATLVPLECKPGKAACEAVLPEERE---ADKQVDSGIIIVTSKEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSEETIRAIDDSLSVGGATVLVR--RGECSFGDKAKNIQDAGGRVMVVQDNSLGVLQNVGASDLL--AKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHPVRLTIEYEPDNNVARAWASLGV----TRWPATSLLEARVLA 1819
            E  +GR+++    +  +++   FG P       L + K    R  C+     E A        A+++ +RG+C+F  KA       A+ LVV++  DD +             G   + +G   +A+VM+R S    L            L+P+ C+     C   L  E+E   A       I     +++ GVR        FL+AT+G+ L    T   LS   +A    SE +  A D S   G A +L     G+CS   K  N Q  G +V+++        ++  + +++  A  + +P + ++   G  L                  N  V  ++ +   N +A AW  L      + WP      +R LA
Sbjct:   39 EPVWGRIYLRHGLAPIQYFRDNFGGPMVAREVALQFPKRESDRFGCELLPPDEQAALAAANRSAVLVVDRGECTFERKARLADQMGAAGLVVVSATDDVQ-------------GPADDDEGDVRIASVMIRRSAGEMLRLVAARTRVFGRLIPMTCEHAPYVCAPRLEAEKEYIDAFTARSGAIFSTQQQQSEGVRAGS-----FLTATYGSVLSTA-TSFPLSTALDAAQACSEVSKEASDASPLSGKAVLLPGGGAGQCSELQKVSNAQRLGAQVVLLAQRDNATTRSHPSVEVMWHAYNITIPVLAVSSATGSTL------------------NSLVDPSLRFAVSNGIADAWELLAKYTQRSAWPQRQQRCSRTLA 381          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1301.2276.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 17
Match NameE-valueIdentityDescription
D8LJJ7_ECTSI1.800e-18558.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2SG82_9STRA6.400e-6132.30Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
A0A7S1UBI5_9STRA1.800e-4932.62Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2UVF2_9STRA1.240e-3735.12Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A7S1UDY4_9STRA1.410e-3433.15Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A482SVK7_9ARCH4.910e-3427.23PA domain-containing protein n=1 Tax=archaeon TaxI... [more]
A0A7S2XWG7_9STRA1.480e-2334.16Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A329REQ3_9STRA3.080e-723.24Uncharacterized protein n=2 Tax=Phytophthora TaxID... [more]
A0A1V9ZKI5_9STRA3.370e-723.90Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A662WZT3_9STRA9.350e-722.89Uncharacterized protein n=1 Tax=Nothophytophthora ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1301contigF-serratus_M_contig1301:80977..91145 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score87.0
Seed ortholog evalue3.1e-14
Seed eggNOG ortholog2880.D7FT44
Preferred nameSPPL2A
KEGG koko:K09596,ko:K09597,ko:K14212
Hectar predicted targeting categorysignal peptide
GOsGO:0000323,GO:0001959,GO:0002682,GO:0003674,GO:0003824,GO:0004175,GO:0004190,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005770,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005798,GO:0005813,GO:0005815,GO:0005856,GO:0005886,GO:0006508,GO:0006509,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0009966,GO:0010008,GO:0010646,GO:0010803,GO:0012505,GO:0015629,GO:0015630,GO:0016020,GO:0016021,GO:0016787,GO:0019538,GO:0023051,GO:0030176,GO:0030660,GO:0031090,GO:0031224,GO:0031227,GO:0031293,GO:0031410,GO:0031902,GO:0031974,GO:0031981,GO:0031982,GO:0031984,GO:0033619,GO:0042175,GO:0042500,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044238,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044430,GO:0044432,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0046983,GO:0048583,GO:0050776,GO:0050789,GO:0050794,GO:0060759,GO:0065007,GO:0070001,GO:0070011,GO:0070013,GO:0071458,GO:0071556,GO:0071704,GO:0071944,GO:0097708,GO:0098552,GO:0098553,GO:0098554,GO:0098562,GO:0098588,GO:0098805,GO:0098827,GO:0098852,GO:0140096,GO:1901564
EggNOG free text desc.aspartic-type endopeptidase activity
EggNOG OGsKOG2442@2759,KOG2443@1
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko01002
Exons11
Model size2465
Cds size1752
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929260.0675511-UTR-F-serratus_M_contig1301:80976..811841622929260.0675511-UTR-F-serratus_M_contig1301:80976..81184Fucus serratus maleUTRF-serratus_M_contig1301 80977..81184 +
1690962772.8186636-UTR-F-serratus_M_contig1301:80976..811841690962772.8186636-UTR-F-serratus_M_contig1301:80976..81184Fucus serratus maleUTRF-serratus_M_contig1301 80977..81184 +
1622929260.266081-UTR-F-serratus_M_contig1301:90640..911451622929260.266081-UTR-F-serratus_M_contig1301:90640..91145Fucus serratus maleUTRF-serratus_M_contig1301 90641..91145 +
1690962772.9432201-UTR-F-serratus_M_contig1301:90640..911451690962772.9432201-UTR-F-serratus_M_contig1301:90640..91145Fucus serratus maleUTRF-serratus_M_contig1301 90641..91145 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929260.085299-CDS-F-serratus_M_contig1301:81184..812211622929260.085299-CDS-F-serratus_M_contig1301:81184..81221Fucus serratus maleCDSF-serratus_M_contig1301 81185..81221 +
1690962772.8341784-CDS-F-serratus_M_contig1301:81184..812211690962772.8341784-CDS-F-serratus_M_contig1301:81184..81221Fucus serratus maleCDSF-serratus_M_contig1301 81185..81221 +
1622929260.102851-CDS-F-serratus_M_contig1301:81941..822581622929260.102851-CDS-F-serratus_M_contig1301:81941..82258Fucus serratus maleCDSF-serratus_M_contig1301 81942..82258 +
1690962772.8481743-CDS-F-serratus_M_contig1301:81941..822581690962772.8481743-CDS-F-serratus_M_contig1301:81941..82258Fucus serratus maleCDSF-serratus_M_contig1301 81942..82258 +
1622929260.1156826-CDS-F-serratus_M_contig1301:82594..826661622929260.1156826-CDS-F-serratus_M_contig1301:82594..82666Fucus serratus maleCDSF-serratus_M_contig1301 82595..82666 +
1690962772.8586934-CDS-F-serratus_M_contig1301:82594..826661690962772.8586934-CDS-F-serratus_M_contig1301:82594..82666Fucus serratus maleCDSF-serratus_M_contig1301 82595..82666 +
1622929260.1266103-CDS-F-serratus_M_contig1301:82978..831371622929260.1266103-CDS-F-serratus_M_contig1301:82978..83137Fucus serratus maleCDSF-serratus_M_contig1301 82979..83137 +
1690962772.866135-CDS-F-serratus_M_contig1301:82978..831371690962772.866135-CDS-F-serratus_M_contig1301:82978..83137Fucus serratus maleCDSF-serratus_M_contig1301 82979..83137 +
1622929260.1372864-CDS-F-serratus_M_contig1301:84131..842841622929260.1372864-CDS-F-serratus_M_contig1301:84131..84284Fucus serratus maleCDSF-serratus_M_contig1301 84132..84284 +
1690962772.8736336-CDS-F-serratus_M_contig1301:84131..842841690962772.8736336-CDS-F-serratus_M_contig1301:84131..84284Fucus serratus maleCDSF-serratus_M_contig1301 84132..84284 +
1622929260.1530485-CDS-F-serratus_M_contig1301:86476..866231622929260.1530485-CDS-F-serratus_M_contig1301:86476..86623Fucus serratus maleCDSF-serratus_M_contig1301 86477..86623 +
1690962772.881603-CDS-F-serratus_M_contig1301:86476..866231690962772.881603-CDS-F-serratus_M_contig1301:86476..86623Fucus serratus maleCDSF-serratus_M_contig1301 86477..86623 +
1622929260.1644413-CDS-F-serratus_M_contig1301:87328..874751622929260.1644413-CDS-F-serratus_M_contig1301:87328..87475Fucus serratus maleCDSF-serratus_M_contig1301 87329..87475 +
1690962772.8902545-CDS-F-serratus_M_contig1301:87328..874751690962772.8902545-CDS-F-serratus_M_contig1301:87328..87475Fucus serratus maleCDSF-serratus_M_contig1301 87329..87475 +
1622929260.199964-CDS-F-serratus_M_contig1301:88471..887411622929260.199964-CDS-F-serratus_M_contig1301:88471..88741Fucus serratus maleCDSF-serratus_M_contig1301 88472..88741 +
1690962772.901751-CDS-F-serratus_M_contig1301:88471..887411690962772.901751-CDS-F-serratus_M_contig1301:88471..88741Fucus serratus maleCDSF-serratus_M_contig1301 88472..88741 +
1622929260.2145252-CDS-F-serratus_M_contig1301:89257..893351622929260.2145252-CDS-F-serratus_M_contig1301:89257..89335Fucus serratus maleCDSF-serratus_M_contig1301 89258..89335 +
1690962772.9137726-CDS-F-serratus_M_contig1301:89257..893351690962772.9137726-CDS-F-serratus_M_contig1301:89257..89335Fucus serratus maleCDSF-serratus_M_contig1301 89258..89335 +
1622929260.2271616-CDS-F-serratus_M_contig1301:89692..899351622929260.2271616-CDS-F-serratus_M_contig1301:89692..89935Fucus serratus maleCDSF-serratus_M_contig1301 89693..89935 +
1690962772.9268422-CDS-F-serratus_M_contig1301:89692..899351690962772.9268422-CDS-F-serratus_M_contig1301:89692..89935Fucus serratus maleCDSF-serratus_M_contig1301 89693..89935 +
1622929260.2406697-CDS-F-serratus_M_contig1301:90511..906401622929260.2406697-CDS-F-serratus_M_contig1301:90511..90640Fucus serratus maleCDSF-serratus_M_contig1301 90512..90640 +
1690962772.9356306-CDS-F-serratus_M_contig1301:90511..906401690962772.9356306-CDS-F-serratus_M_contig1301:90511..90640Fucus serratus maleCDSF-serratus_M_contig1301 90512..90640 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1301.2276.1prot_F-serratus_M_contig1301.2276.1Fucus serratus malepolypeptideF-serratus_M_contig1301 81185..90640 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1301.2276.1

>prot_F-serratus_M_contig1301.2276.1 ID=prot_F-serratus_M_contig1301.2276.1|Name=mRNA_F-serratus_M_contig1301.2276.1|organism=Fucus serratus male|type=polypeptide|length=584bp
MRCCKRSPSRLLGWIWTLASSSGWQSPWYNHYYSAARIACVAIPIRIAED
VAADIPPVIVTSDDQRSPGECLPIDERRNPSLLEKYLYRETVRREIEEEH
LPELPEFLESIGLQHRLQDFYRKSVFETKYLLTVNEMDLRLMSLSPDEVR
GVQASVAKLRVEREVTEERMHPLLVRRNELTYGRLFVDRSASSYEFYLAG
FGPPAPVDMAPLVWAKPRNACQTSTDPELAGAIVLAERGKCSFVVKANNV
ASSNASALVVINNGDDGEELFRVAATLGGRSGGEPEPKGPQGMATVMVRG
STLPSLSKALEWGPTTATLVPLECKPGKAACEAVLPEEREADKQVDSGII
IVTSKEAAGVRNRESETFEFLSATFGTTLPLGLTEVVLSVPRNACSRLSE
ETIRAIDDSLSVGGATVLVRRGECSFGDKAKNIQDAGGRVMVVQDNSLGV
LQNVGASDLLAKELYMPGVFITDRAGERLVSAAAAGANETREKSYNNNHP
VRLTIEYEPDNNVARAWASLGVTRWPATSLLEARVLARQLKAKHSGSRCR
LLWIEDKAREVERSLLQYSTDDDDGSDGAAKKF*
back to top

mRNA from alignment at F-serratus_M_contig1301:80977..91145+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1301.2276.1 ID=mRNA_F-serratus_M_contig1301.2276.1|Name=mRNA_F-serratus_M_contig1301.2276.1|organism=Fucus serratus male|type=mRNA|length=10169bp|location=Sequence derived from alignment at F-serratus_M_contig1301:80977..91145+ (Fucus serratus male)
GTTTAAAGTCTGCAGCCGGGTTTGGTTCTTTTTTTCAAATTGCCCCCGCT CGAGTTCCGCCCGAACGGCAAGCGGGCAGTTTTTATTTTTCAGATGCATC CAGATTTTTCTCCGTCGAATTATTTTATATCAACGGAGGGACTCGGTATC TCTACTAGCGAGTATCCTTTATCTATTTCATCGTTATCGTTACTTCAAAA GCTCCAAGATGCGATGCTGTAAGAGATCACCATCACGACTCTTAGGTGCG TGAGGGCGTGTACTACGTACAGGTGGTGAACAGTCGTCAAGAGCATCGAC TCAACCAATAGCATTTTCTGCCCTTCGCCTATTTTACGATTTGCTCCCCA AATATAGTAAGATATCGACCGCTGAATCATGCCGCTTACACAATTATATC TGCTAGCGATAATGATATGTATGATAGTATTTATTCGCGGTGTCGTATCT GGGCTCCGACATCGTATACAGTACACGTGCAGTAGCTGACACTGCTGAAT CAAGAGATTTTGCCACGCCACCCCGAAGCCGGAGCGCGTTAAGCTTCGTG TGCTGGATCTTGCCAATCGGATTCAGCGTATTAGTGTCGTACACCACAGA ATGCTGTAGGAGTAGGCAACTAAGCAACAATATCACACATGACATGCATG CACACACCGTTTATTGTACACAATATTTCAAGGCTTCTGGCGAGCAAACA AACAAGAGCTATGCTACTCTGCTACACATTCTATACAGCACCACCAGTGT ATTCATACCTCATTTTCGCTGTGAATACCTTACTATTATAAGTACTTATT GTTAGGGCCTACTATTAATAAATAGTAACACaATAATAATTGAAAATATC AACATTTGACCTCCTTCGCAGGTATATATTATGTGTATCCTTCTTCTGTT TGATGGCGGGCATCATCCCTAATGTGTAGTCTATGCGTGCGCTACATACA CGCCGCCTGTGGCAGGTTGGATCTGGACGTTGGCGTCATCGTCAGGATGG CAGAGTCCGTGGTACAACCACTATTACTCCGCTGCGCGCATCGCCTGCGT GGCCATACCCATACGCATCGCGGAGGATGTGGCCGCGGATATACCTCCAG TTATTGTCACTTCCGACGATCAACGCTCTCCCGGAGAATGCCTCCCTATT GACGAACGCCGAAACCCATCCCTCCTCGAGAAGTACCTCTATCGTGAGAC GGTCAGGAGGGAGATAGAGGAAGAACATCTTCCTGAGCTCCCAGAATTTC TGGAAAGTATTGGGTTGCAGCACCGGTTGCAGGTACTAATATTTTTTATC CACTCAACGTCACTTTAAAAAAAAAATGTAATACGGCCTGTTTAGTCGCC GCGATGGCACCACCGACCACGCCACACACAGCTATTATTATTGCTGCCTG ACACTATACTCCTCATCCTGACCATATCTACATTATATACCTGGTACACC CTGTAGCACAACAAATTGAAGATAATACGATGTACGCTATTATACTTGTA ACGATGAACTTTCTGGGAAAAGTACAAACTAACCACGTACCGACGCCGCT CTTGCTCGAAGGTTAAAACAAACAAAAAACTTGTTTTTCTTTTCTTTTCT TTTTACTTTTTCCCCCAGGATTTCTACCGTAAAAGCGTCTTCGAAACAAA GTATCTACTCACCGTGAACGAGATGGATCTGCGCCTCATGGTGAGCGCGC CACTCGGAGAGCGTGTATCTTTATACCAACCGGGAGACGTTTATTAGCGT CGATTAGCCCGAAATTTCTCTAGAAATATCGCCATTACGACCTCTTGCAT GAGAAGGGCTGGATAGGGATCGGACCCCCCCCCCCTCCGCCATCAAAGCC ATTCAATTCGGGCAAGAGCAGGGAACTCGACCGCTGTTTATTCCAGCGTC GTTAGGACCACCGTTTGAAAGGAAAAGGCGCCAAATGAAGGCCCATTCTT CTTCTCTTCTCACGTTCTGCTTCCTGTACACGACTTTTTTGCGGTGGGAC AGAGCCTGTCACCCGACGAAGTAAGGGGCGTGCAAGCTAGTGTCGCCAAG CTCCGGGTAGAGAGAGAGGTCACGGAGGAGCGAATGCACCCCCTCCTCGT CAGGAGGAACGAGCTTACGTACGGCAGGCTTTTTGTTGATCGGTCGGCAT CAAGCTACGAGGTGTGTGTGTAGGGCCTTTCGACAGTGCATCATCATGAA CAACGTATTATATTTATATATATAAAGAAGGGAACGATCATAATCATAGT AATAATTTGGAGGGGGGGGTGGACTCCAAGTTAGGCAGGCTGCCTGGCGC ACGGTTTCCACTTCGACGTCGTACAATAGCGCTTGGACTAGGGAGGGCAT GGAATAATGAGAGCACTGTATGTAGTAGTAGATCGGCTTTCCTCGCTAGG GTGAAACTTACGCTAGTTAACTACTATAATATACTATAACCCCGCCCATA TTAGGCCGGTCGCCCCGGTAGCTCATAGGTACCTCGTAACCTTCTGACAC GTTGGGACGTGAGTTCGATCCCGGCAAACGCGATTTTTCTCACTAAAAAC TAAAAACCAAAATAAAAATACCCAACGGGTGGAGAACGATTAATTCGTTA GTACACAAAATTCGACTTCACGGTCGGCGAGGGAAAGGAATGGCTGAATC CTCCTCGCGATAAAAATTAAGGCACGCACCGCAGAAGGAAGGTGGATGAG AAATCCTGTGTGACCTTCCTCCTGTGTGACCCCGGCTGGTACGTCCAACA AACTTGATGTCCAGAATGGATGGGAAGAAAACACACACACAACACATACT CCCCTACTAGCACTTTCCATGATCGGGGGGGGACGGGGATAGTTCTCCGT CGGGCCCAACATGAAAGAGATTTGTGAGAAAACACGGGGCTTTCGGCACG CGACTGTTGAAACAAAAAGAATTCATTCGTTTTTTATTGAAGTTGAAGGG AACTGTTTATACCTTACTCTTCCCTAGCTACCACCCAGATCGTGTTGCAA CTAGCGCTGTTCGTCCCCTCGTGGAACAGCCCAGTAATTGTACCACGGGG TCTCCAACAGAGCAACTTTATTGTCAAGTCCTCGGGGTGGCGTTTTGCTT GCTGCTTAGACCGAGATGACCGTTCCTCCCTACAACCCAATCGCTAAAAC CGCAGTTCTACCTGGCGGGGTTTGGGCCTCCGGCGCCTGTGGACATGGCA CCTCTAGTTTGGGCGAAACCCCGTAACGCCTGCCAGACCTCCACAGACCC AGAGCTCGCGGGGGCGATTGTGCTCGCAGAGCGCGGGAAGTGCAGCTTCG TGGTAAAGGTAGAGAAAGCGTTCCCCCGTAAAAAATCGGCGGTGTATACG TTTGGACTTGACTTTTGTTGGGTTTTGTTTTGCTCTCCCCCAGGTTTTTC AACATATATTTGCTTCGCGCCCACGGTGATACCCCATACTACTACTGCAC ATCACGCCTAAATCAAGCTAACGCAGATAGATGCATCTACCGTTTGTGTT CCTCCACGTAAATCTTGAATGACATTTTTCTGACATGATGAGCGACTTGT TGATGATATGATAAAACAGCGGCCGCCGTCGAATTGTGGTGTCGGATCAC CCGGTTCAAGCACAATTAGTCGCATTTTTCTTGTATTTTGCTATAATAAG GTAACAACGGTGTTATTCCGCGTTTCTTGGTGTGTCTTTTTGGCGCACCC TCCCTATCCTCCCGGCCGAATCCCCACGTTGTAGCAAGCTATCGCTTCAA CCTATAACAACATAAAAGGATCGCCATTATTAATACTACATGATGTTTAT TTATCTTTCTGAGCTCCAAAAAAATATGTATACTACTTCTACTTGTAGTC AGAAGCAGCAAATAAGAGTGTTTCAACGAATGGGGGGGGGGCGAGGATGC GATGATCCCGTCTCCGGGAAGGTCACCAAACCAACCCCTTCCGGGGATAG GACGACATGATCCCCTACATGATCGGCAAGCTTGCCCCGAACTGAACTCA TTTCACAAGAAGAGTGTTAGTCAAATAAGTCCCCGGGAAGGGCTATTTTC GTGCCGTTCCCTCCCGAAATGGGGACAAATTGGTGACGTCTCCCCACCCC CCAATCATTGAACGAATCAAAATGCGAAATGATACATGTTGTGAAACACC ACCAAAGAACGTAGTAGGTCGTAGCGAGGTACGCCGAATCGTCTTGGTTA TATTGCGGGATCACCAAAATACAGGGAAATGTGCAACACACAGATGGGGG GGGGGGTGGTGCCGCTACAGCACAGCCCCCCCCATACATGGCGAGGTCTC ACTAAAACAACCTTCATGTAGGAGTCCGGTGTCTTTAATCTATAACCAAT ACACGTATTATGTCTGCTTGTTTTTGGAACGCCGAAAAGTAAAGCTAAAG CTATAGAGTTATACTATTAATATTGCGAGAAGTCATCAAAAATGATTGGT GATACGTCGTGAAGAGTCGTCAAAATACGTACGAAGTCCATTGTATGTAG TGGGGTACACCAAATCGTCTAAGAAATTGTTTTAGGGGTATGTGACTGAA ATGTGTGTAGAGGTTGTAGGGAAGAGTCACCGAGATTCATTGTTTAAGGG GTTAGCCAAAACATGGAGGTCCCGTGGTCCACAGGCTTACCGCTATCGTA ACGGGTTGTTGCCGTAAGTGAACACTCTGCGCACCACAAACCTACGCCGC CACTGTATAGTATAGTACCTTTTCGTCCCATGAACATGGAAAATGCTCAG TATAACTTATATATGTCTCGCCTTTCTACTAAAATAATAATTTTTGGTAA CGTTTGTAACGTTTCACAAGAGTCTAATTATTATGGGTCTCCCTGCGCTA CACTATACGCAAGACATTTCCATGACCTTTTACTACAACCGACAATATTT TGGGGGAACCCCTTCATGGAGCCAAATAACTTTTGCAGGGAGGGGTGGCG CGGTACACTATCAGAAGGTCTAGGTGCATTCATATTTTTATTTAAATAAA AAACTACGGTTAACACTAGCTCTCTGTACACGGCACAACAAAATTATGTC TTTATCTATGCAATCAGTGTTCCGCTAGGTCCTCTGAAAACGCCTCCAAC GCTCGCGCGGGAGGGGGCAGATAGCGCCCTCGCTCCTACCGTTTCTCACA ATAATATTGTAATGAAACCCATCAAAAATCAAAGCAGTAACTAAGTAAGG CGTTCAACGAGCAGTAAGCCTTCATCACCGAAAACTCTAAAGAAATGAAT GCATGTTTTCCCGTGTCACAGTAGTACACCGTTTCCGTTGTCGGGGGAGG GCGTTGCCACATGGTAGAGCCCCTACCGGGGGCATATTTGACCAACCCCT GGAGATAAATTTAGGGCAAGCTTGCCGAATATGTCGGTGATCGATCGCGC TCACCGGGGACGTCGTATCCCCGCCCTCCCCAATCGTTGCGCCTGTGCGC GATCGATGTGATGCGCCATGCGGGCACGAAATCTTGCTCGCGAGAAAAAG GCCAACAACGTGGCAAGCAGCAACGCGTCTGCTCTCGTGGTGATCAACAA CGGTGACGACGGTGAGGAGCTCTTCCGGGTTGCGGCCACCCTGGGAGGTC GCAGCGGCGGAGAACCGGAGCCGAAGGGGCCTCAGGGCATGGCCACCGTG AGTCTCTGGGGTGTACCGAGGTATCTTGCTCGCAGGATGCTCTCACCGAA GCGGGGCGCGTGCATCCGTTCCATGACTTCTGTTCGTTTTCAAAAATATG ATCCCCGATAATAGCCAAGACCTTGTCCATGAATCAACAAGCCAACGCGC GGACAAAATGCCGACCACCTTTCCCTTCTTTAGAACTTTTGTGGCACTTT GCCCCTGACTCTTCAGTTACGAGATGCCAGACGGGCATATCACCATGTTT GTGACCCGTCTCCCCCCCCCCCCTTCCACATTCCAATTCCGAAGATTTAT CGCTAAAGGGGAAATAATGTCGTCTGACAAGCACCAACAATAATAAGCAC CGTAGTCGTGAAATCAATTTTCTTTCCCGCAAATTCAAACGGTTCGCGGG ACTACAAAATACCGCCTCTGGAATCCCTACTTTCTTATATTATCATCAAC ATTATACAAACATTGCAGCAATTATGAGTTACTTAGAACTGTGGGACTGC CACTGTCCAATTGATAGTTTCCGTTCGAGCCCTTAGAGGGCGATTAATTC CCATGTATTCGACCATATTTCACCCCCCTAGTCGATAACCACCACGGTAC TAACTTTTCCCCGCTGCCTATACATAAACTGTACAGTGCGAACAAACGCT GGCCAAACGCCGTCTGTCTGCCGCCCTACTCCATTCATCGGTCCCCAAGC AGGTGATGGTGCGCGGGTCGACGCTCCCGTCCCTCTCAAAGGCGTTGGAA TGGGGCCCCACAACCGCGACGTTGGTTCCACTGGAATGCAAGCCTGGAAA AGCCGCGTGCGAGGCCGTTCTGCCGGAGGAGCGGGAGGCTGACAAGCAGG CGCGGATCTTGTGTCTTGCTTTGAACTGAACGATTAAGCACACAAACATA CACACACACGCGCGCGCGCGCACACACACACACACACAGTCGCGTCTGAT TAGAGGTTTTCGTAATAAGTATCATTGATCCCCCCTCGGGAGGATCAATG CGAGTGGCATAGAATGACTAGGATGACAGGGCCGGATTGCGTGGTTATGT GCAATTTAATAAAATACACACACACACACACACACACAAACGGTGAGACG TGCAAAGGCAGTATCCGTCATTGAAACTACCTTGAAGACTACTGGCCTTG TGCTGGCAGACTCTCGACGGTGAACGCCATCGGTACGCAATTGCGTGGTG ACCTGATAAACTCGGGACTGGCCCGATGGCGTATGGTGGTAAAAGTAAAA TGGACGTCACCGCAGAAATCGGTAAGAATCCCGTGAGTGAGCACCAGATT CAGCTTGGGCGTGGAGAATGAGCACGCTGACGCGGGATGGGATACAGCCG AGCCCGTCTCGCGAGACCAAATTCTCAGGCGCGACACACATACACATACA CACATACACAAAAAGACTCCTATTATCATGGCCCTTTCTTGGCATGCTGT ACTATGCAGCGCATTAGTTACCAGGTCGGCCGAAGACGGACGTGTGCGTA GGATGGGTGGCGAACGAGGGCGGGGCGATGAGCGCAGTATGTAACAGTGG TCTATTTAGAAAGGGTCGTGTCCGTGAAAGCACATAATACTCCGACCGGT CACAAGTAGGAGAACTTGCTCATGCCTTCTTCCGTGGAACCGTTGGTCTG TCCTTACCAAAAACGTTTTTTAATACGTCGTAGAGCATTAAGAAAGAGTT ATACCACACTGGGAGGCGAGGGGAAACTCAGCGATCCGCGTCGTCGGCGG AAAGCCTCTCCGTCCAATGTGTTGCGTGGTACGCCGCGCGAAAAACACTT CGCTGTCTCTTTACGTCGGGCACTTGATCAACGCGCCTCGAGTAGGTCGA CTCCGGGATCATCATTGTCACCTCCAAAGAAGCCGCGGGAGTTCGCAATA GAGAATCCGAGACGTTCGAGTTCCTCTCCGCCACGTTCGGGACAACCCTA CCGCTCGGACTCACTGAGGTTGTCCTCTCCGTTCCGCGGAATGCTTGCTC GCGTCTGTCCGAGGAAACCATTCGGGCGATTGACGACAGCCTTTCGGTGG GAGGAGCCACGGTTTTGGTGAGAAGAGGAGAGTGTTCGTTTGGCGACAAG GCGAAGAACATCCAGGTGATTTGTTTGTTTGGGGGTCACCACCCTCGCGT GCCTGGCCTTTGGCCTTTGGGAAGGGAGGGAATGGTCCATCGAAAAAAAA CGTTCAGTCGGACGACTCCTCATTGGTACGCGCCCGATACACCAAGTCAA CAAGAGCTCCAAAATAGTTCCATCGACTCCAGTACATGGCTAGTTCTCGC CTGAAGGGTCGCTTTCACGCACCGTGCCTTTGTGCTCTGACGCACGCTTG GCAACCTTTGAGCGGGTGAGGGATCTCGGGGGGGTTTCCAGGATTGTTCC ACTTCGACGGGCATAGCTCGTGTGAATTACATGCTGTGTTATACCACCTT CAAGAAAAGACTGAATCACAATGAATGGTTTGTCACCGATCGCCGATGAA ACCATCGGCGCTGTTGGCGAAACCACGATGCGAGGCTATGAAGCTGGCAC CTCGTGCGGCAGTTTGTTGGTTTTTCAATTGACACTCTCATAGTAGCCCT CACAAAACGTCTGCGATTTATTAATGTTCAGGACGCCGGTGGGAGGGTGA TGGTAGTCCAAGATAATTCATTGGGCGTGCTGCAGAACGTCGGGGCGTCA GATCTCTTGGTGACAAAAGCTGTCTGACAGCGCGTGTCTCGGTTGGCCTG CGCGTACCTCTTGATTTTTAATATTTGGCGTGGCACCTCTTCGTCGTGTA TAGGTCGCAATGTATCATGTTACGTTCAGCGTGCGTACGTATGTCTGAAC GCGTTGCTTCTCGGTGCTCCATTGATGCCCCACAAATCCATTCGCCTCCA TGCATCTTTTTCAACGGCTCACTCACGCCTCTTCACCGCACTCTATTACA AGTACTTGCAAACGTGTATATTCTATCATATTGCCCACGAGTGAAGTCAG CACACGCCGAGCCTCTCAGATATAATACCTCGCACGCTCGCCCACCCACT CGCGTCTCTGTTTCAGGCCAAGGAGTTGTACATGCCTGGCGTTTTCATCA CGGATAGGGCGGGAGAACGTCTCGTTTCGGCCGCGGCCGCAGGTGCCAAC GAGACTCGAGAAAAGAGTTACAATAACAACCACCCTGTACGTCTCACCAT AGAATATGAGCCTGACAACAATGTGGCGAGGGCTTGGGCTAGTCTAGGGG TGACGCGTTGGCCGGCAACGAGTCTTCTGGAGGCAAGGGTATTGGCGAGA CAGCTGAAGGCGAGCGAATGATATGGTTGTCAAAGAAACGACTTCGATTT GTTGCGTGTCGACGGGGGAAAAGTGATGGCTTGGTATCGGCCGCCCTGTA TATAGTTCATCCAGCACCCAGCCGGCCCATCATGCAGAGTTCTGGTGACT TCAACGCCGTCGCTGGATGAAAGCCCAGAAAGCTTTTATACATACGTGCT CAGAGGCTGGGTGACGTAGAAAGTCATCTTTTTGGCAGCGATATGCCACG ACGTTCTTGCTCTTATTTGCCGTGATCCTCATCTTGCAGTTCTGCTGGAG AGCGGCTATCGACAGACTAACAGTAGGACAAGAACCCCCCCCCCCCTCCC CCCAGCATCCCGTTCCCGTGCGATTCCTTCGTCAGAGGGAGTAAAGCTTC GGATCGGTTGCATGTCCACGTTCAAGCGCCTCCCGCGCGGGATGGCGTAC TCGAACAGTAATGATGAGATTCAATGGTCGTAATTTTTTTAGAATGAGAG TGTAGTGTTGTAGTAGCTGTTGGGGGAATTTTGATCCGCACACTCTCTCG TGCCACCCGGCATGTAACCTGGTGGCGTGCCGCAGGCAAAGCACTCGGGA AGCCGTTGCAGGCTGCTGTGGATTGAGGACAAGGCGCGAGAGGTCGAACG AAGTCTGCTTCAATATTCCACCGACGATGATGATGGGTCGGACGGCGCTG CCAAGAAATTCTGAGCCGCTGTGTTGAATTATTAGAAGGGGGGGGGAGGC ACCAGCAGTGACGACGAAATCGGACCCAACCGCTATGTTTTCGGCAAATT GTATGACAACTCGTAAATATTATGTGAACACGGTAACTGCTGCACATGCC CGATAGCCAAGCGAGGAACTATCTGGAGTTCTTAATATATTGAGGCTGTA CTTTGGTGTTCGCGTTGTAATCGTTACATCCCTGACTTAGTTAGTAAGGA AGTTCGCTCTGATCGCGCTTGGGCAACGCCAGGCGTTGTGGTGCTGCTTG ACATGCGACAAAGAAAAATACGTTATTTTTCAGTACCTACTTGTCAAATT ATATGTCCTTTAGGACATTGCAAGTAAAGTCTTACTTGAAGGATGATTGT AAGCTTTTGGAAGAAGAAGTAAAAGTCAGATAGAGAGTAGCTGGACGTTT TTGGCTACATTATGTAAGTAGTCATAATCAAGTAAAAAAAGGAGCAGCGC ACCCCAGTGGGTTCCCTCT
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig1301:80977..91145+

>mRNA_F-serratus_M_contig1301.2276.1 ID=mRNA_F-serratus_M_contig1301.2276.1|Name=mRNA_F-serratus_M_contig1301.2276.1|organism=Fucus serratus male|type=CDS|length=3504bp|location=Sequence derived from alignment at F-serratus_M_contig1301:80977..91145+ (Fucus serratus male)
ATGCGATGCTGTAAGAGATCACCATCACGACTCTTAGATGCGATGCTGTA
AGAGATCACCATCACGACTCTTAGGTTGGATCTGGACGTTGGCGTCATCG
TCAGGATGGCAGAGTCCGTGGTACAACCACTATTACTCCGCTGCGCGCAT
CGCCTGCGTGGCCATACCCATACGCATCGCGGAGGATGTGGCCGCGGATA
TACCTCCAGTTATTGTCACTTCCGACGATCAACGCTCTCCCGGAGAATGC
CTCCCTATTGACGAACGCCGAAACCCATCCCTCCTCGAGAAGTACCTCTA
TCGTGAGACGGTCAGGAGGGAGATAGAGGAAGAACATCTTCCTGAGCTCC
CAGAATTTCTGGAAAGTATTGGGTTGCAGCACCGGTTGCAGGTTGGATCT
GGACGTTGGCGTCATCGTCAGGATGGCAGAGTCCGTGGTACAACCACTAT
TACTCCGCTGCGCGCATCGCCTGCGTGGCCATACCCATACGCATCGCGGA
GGATGTGGCCGCGGATATACCTCCAGTTATTGTCACTTCCGACGATCAAC
GCTCTCCCGGAGAATGCCTCCCTATTGACGAACGCCGAAACCCATCCCTC
CTCGAGAAGTACCTCTATCGTGAGACGGTCAGGAGGGAGATAGAGGAAGA
ACATCTTCCTGAGCTCCCAGAATTTCTGGAAAGTATTGGGTTGCAGCACC
GGTTGCAGGATTTCTACCGTAAAAGCGTCTTCGAAACAAAGTATCTACTC
ACCGTGAACGAGATGGATCTGCGCCTCATGGATTTCTACCGTAAAAGCGT
CTTCGAAACAAAGTATCTACTCACCGTGAACGAGATGGATCTGCGCCTCA
TGAGCCTGTCACCCGACGAAGTAAGGGGCGTGCAAGCTAGTGTCGCCAAG
CTCCGGGTAGAGAGAGAGGTCACGGAGGAGCGAATGCACCCCCTCCTCGT
CAGGAGGAACGAGCTTACGTACGGCAGGCTTTTTGTTGATCGGTCGGCAT
CAAGCTACGAGAGCCTGTCACCCGACGAAGTAAGGGGCGTGCAAGCTAGT
GTCGCCAAGCTCCGGGTAGAGAGAGAGGTCACGGAGGAGCGAATGCACCC
CCTCCTCGTCAGGAGGAACGAGCTTACGTACGGCAGGCTTTTTGTTGATC
GGTCGGCATCAAGCTACGAGTTCTACCTGGCGGGGTTTGGGCCTCCGGCG
CCTGTGGACATGGCACCTCTAGTTTGGGCGAAACCCCGTAACGCCTGCCA
GACCTCCACAGACCCAGAGCTCGCGGGGGCGATTGTGCTCGCAGAGCGCG
GGAAGTGCAGCTTCGTGGTAAAGTTCTACCTGGCGGGGTTTGGGCCTCCG
GCGCCTGTGGACATGGCACCTCTAGTTTGGGCGAAACCCCGTAACGCCTG
CCAGACCTCCACAGACCCAGAGCTCGCGGGGGCGATTGTGCTCGCAGAGC
GCGGGAAGTGCAGCTTCGTGGTAAAGGCCAACAACGTGGCAAGCAGCAAC
GCGTCTGCTCTCGTGGTGATCAACAACGGTGACGACGGTGAGGAGCTCTT
CCGGGTTGCGGCCACCCTGGGAGGTCGCAGCGGCGGAGAACCGGAGCCGA
AGGGGCCTCAGGGCATGGCCACCGCCAACAACGTGGCAAGCAGCAACGCG
TCTGCTCTCGTGGTGATCAACAACGGTGACGACGGTGAGGAGCTCTTCCG
GGTTGCGGCCACCCTGGGAGGTCGCAGCGGCGGAGAACCGGAGCCGAAGG
GGCCTCAGGGCATGGCCACCGTGATGGTGCGCGGGTCGACGCTCCCGTCC
CTCTCAAAGGCGTTGGAATGGGGCCCCACAACCGCGACGTTGGTTCCACT
GGAATGCAAGCCTGGAAAAGCCGCGTGCGAGGCCGTTCTGCCGGAGGAGC
GGGAGGCTGACAAGCAGGTGATGGTGCGCGGGTCGACGCTCCCGTCCCTC
TCAAAGGCGTTGGAATGGGGCCCCACAACCGCGACGTTGGTTCCACTGGA
ATGCAAGCCTGGAAAAGCCGCGTGCGAGGCCGTTCTGCCGGAGGAGCGGG
AGGCTGACAAGCAGGTCGACTCCGGGATCATCATTGTCACCTCCAAAGAA
GCCGCGGGAGTTCGCAATAGAGAATCCGAGACGTTCGAGTTCCTCTCCGC
CACGTTCGGGACAACCCTACCGCTCGGACTCACTGAGGTTGTCCTCTCCG
TTCCGCGGAATGCTTGCTCGCGTCTGTCCGAGGAAACCATTCGGGCGATT
GACGACAGCCTTTCGGTGGGAGGAGCCACGGTTTTGGTGAGAAGAGGAGA
GTGTTCGTTTGGCGACAAGGCGAAGAACATCCAGGTCGACTCCGGGATCA
TCATTGTCACCTCCAAAGAAGCCGCGGGAGTTCGCAATAGAGAATCCGAG
ACGTTCGAGTTCCTCTCCGCCACGTTCGGGACAACCCTACCGCTCGGACT
CACTGAGGTTGTCCTCTCCGTTCCGCGGAATGCTTGCTCGCGTCTGTCCG
AGGAAACCATTCGGGCGATTGACGACAGCCTTTCGGTGGGAGGAGCCACG
GTTTTGGTGAGAAGAGGAGAGTGTTCGTTTGGCGACAAGGCGAAGAACAT
CCAGGACGCCGGTGGGAGGGTGATGGTAGTCCAAGATAATTCATTGGGCG
TGCTGCAGAACGTCGGGGCGTCAGATCTCTTGGACGCCGGTGGGAGGGTG
ATGGTAGTCCAAGATAATTCATTGGGCGTGCTGCAGAACGTCGGGGCGTC
AGATCTCTTGGCCAAGGAGTTGTACATGCCTGGCGTTTTCATCACGGATA
GGGCGGGAGAACGTCTCGTTTCGGCCGCGGCCGCAGGTGCCAACGAGACT
CGAGAAAAGAGTTACAATAACAACCACCCTGTACGTCTCACCATAGAATA
TGAGCCTGACAACAATGTGGCGAGGGCTTGGGCTAGTCTAGGGGTGACGC
GTTGGCCGGCAACGAGTCTTCTGGAGGCAAGGGTATTGGCGAGACAGCTG
AAGGCCAAGGAGTTGTACATGCCTGGCGTTTTCATCACGGATAGGGCGGG
AGAACGTCTCGTTTCGGCCGCGGCCGCAGGTGCCAACGAGACTCGAGAAA
AGAGTTACAATAACAACCACCCTGTACGTCTCACCATAGAATATGAGCCT
GACAACAATGTGGCGAGGGCTTGGGCTAGTCTAGGGGTGACGCGTTGGCC
GGCAACGAGTCTTCTGGAGGCAAGGGTATTGGCGAGACAGCTGAAGGCAA
AGCACTCGGGAAGCCGTTGCAGGCTGCTGTGGATTGAGGACAAGGCGCGA
GAGGTCGAACGAAGTCTGCTTCAATATTCCACCGACGATGATGATGGGTC
GGACGGCGCTGCCAAGAAATTCTGAGCAAAGCACTCGGGAAGCCGTTGCA
GGCTGCTGTGGATTGAGGACAAGGCGCGAGAGGTCGAACGAAGTCTGCTT
CAATATTCCACCGACGATGATGATGGGTCGGACGGCGCTGCCAAGAAATT
CTGA
back to top