prot_F-serratus_M_contig130.2255.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig130.2255.1
Unique Nameprot_F-serratus_M_contig130.2255.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length230
Homology
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A6H5KT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT12_9PHAE)

HSP 1 Score: 238 bits (608), Expect = 2.630e-76
Identity = 140/218 (64.22%), Postives = 147/218 (67.43%), Query Frame = 0
Query:   13 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESA-SKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGEAS 229
            MNKTYLRYELSETFGVVASPQSN ++DSTGNLAISAALH+VAVWNLRQCSLVRLLSPEGESA S+ QVT+LLL          YSSGL+LLFSL TG T VTLHGHRSAVTA RYH                                   VTDVVFLEG G   G A    GG       RL NGLASCSKD LVKLWDLDTQSCVQT+VGHRGE S
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHEVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGRTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLEGGG---GGAP---GGC------RLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEVS 206          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI)

HSP 1 Score: 233 bits (594), Expect = 3.070e-67
Identity = 136/216 (62.96%), Postives = 142/216 (65.74%), Query Frame = 0
Query:   13 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESA-SKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            MNKTYLRYELSETFGVVASPQSN ++DSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESA S+ QVT+LLL          YSSGL+LLFSL TG T VTLHGHRSAVTA RYH                                   VTDVVFL   G          GG       RL NGLASCSKD LVKLWDLDTQSCVQT+VGHRGE
Sbjct:    1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGSTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLGSGGXXXXXVV--PGGC------RLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGE 208          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA)

HSP 1 Score: 161 bits (407), Expect = 8.700e-42
Identity = 93/215 (43.26%), Postives = 118/215 (54.88%), Query Frame = 0
Query:   15 KTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAS--KGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            KTYLRY L +TFGV+AS QSNA+FD TGNLAI+AAL +VAVWNLRQ +L+R+L PEG+ A+  KGQV+ L L          Y++G++ ++ + TG   V  +GH+SAVTA R++                                   VTDV FL   G                    L  G  SCSKD LVK+WDL+TQ CVQT+VGHR E
Sbjct:    2 KTYLRYVLHDTFGVIASTQSNAVFDKTGNLAITAALQEVAVWNLRQGTLLRMLKPEGDEATIAKGQVSYLALSPNGRRVAAGYTTGVIRVYDVATGAMAVAFNGHKSAVTAARFNDGGALLISGGADTDVILWDMVAERGECRLRGHRDGVTDVAFLPAGGA-------------------LARGAVSCSKDTLVKIWDLETQHCVQTVVGHRSE 197          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A6U0TFN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TFN6_9STRA)

HSP 1 Score: 121 bits (303), Expect = 7.190e-28
Identity = 79/219 (36.07%), Postives = 108/219 (49.32%), Query Frame = 0
Query:   11 KKMNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAS--KGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            K MN+TYLRY   ++FGV+ +P+ N+I   + +LAI+ AL D AVWNL+Q SLV+ L PEG S    + +  + LL          Y+SGLL +FSL  G   + LHGHR+ VTA                                       +T V FL+G  R+SG +                 GL S S+DAL+K+WD+  Q C+QT+ GHR E
Sbjct:   22 KSMNRTYLRYVPQQSFGVICTPRGNSILGESEDLAITPALRDAAVWNLKQGSLVKRLRPEGGSGGVQEAEEVSQLLLLGRDRVAAGYTSGLLRVFSLSEGRQELALHGHRTEVTALSCSTDAAFLATGAKDTDVVVWDTISETGVCRLKGHRHAITAVSFLQG--RDSGTSVGFF-------------GLVSASQDALLKIWDVTAQHCLQTVTGHRAE 225          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA)

HSP 1 Score: 116 bits (291), Expect = 2.910e-26
Identity = 87/215 (40.47%), Postives = 102/215 (47.44%), Query Frame = 0
Query:   13 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            M K+YLRYE    FGVVA+   N IFD TG LAI+ AL DV VWN+RQ S VR L  +G     GQ T L L          YS+G + +F L TG   VTL GH SAV A  +                                    V D+V   G  R  G   +KD  T  R        L + SKD+L+K+WDLDTQ CVQT VGHR E
Sbjct:    1 MVKSYLRYERETAFGVVAAAAGNVIFDRTGRLAIAPALKDVVVWNVRQGSFVRALRGDG-----GQATALALSPDGALVAAGYSTGAVRVFRLATGALEVTLDGHASAVEALAF-----------------GARGGAAVLASGARDTDVIVWDLVSQTGLFRLKG---HKDAVTALRFVGERDARLVTASKDSLLKVWDLDTQHCVQTCVGHRSE 190          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A2P6VAW5_9CHLO (WD repeat-containing 3 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAW5_9CHLO)

HSP 1 Score: 114 bits (284), Expect = 2.510e-25
Identity = 111/218 (50.92%), Postives = 137/218 (62.84%), Query Frame = 0
Query:   13 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESASK--GQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGD-GRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            M K YLRYEL+ T+GVVAS   N ++D  G   ++ AL +VAVWN++Q +LV+ L P    + K  G+VT +            Y+ G + L+ L  G    T  GHR  V+A R+  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   VVF+EG  G ++GA+     G +R         L S SKD LVK+WDLDTQ C QT+V HRGE
Sbjct:    1 MVKAYLRYELAGTWGVVASSNCNVVYDRGGRYLLTGALENVAVWNVKQAALVKTLVPPISQSGKVAGEVTQIAASPTANQIAVGYADGTIRLWDLDAGECTATFSGHRKEVSALRFSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVFVEGGAGGQAGAS-----GARR---------LVSASKDELVKVWDLDTQHCCQTVVAHRGE 204          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: C1EGB1_MICCC (Utp12 domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGB1_MICCC)

HSP 1 Score: 106 bits (265), Expect = 8.460e-23
Identity = 100/216 (46.30%), Postives = 122/216 (56.48%), Query Frame = 0
Query:   13 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQ-CSLVRLLSPEGESASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            M K YLRYE +  FGVVASP++  ++D TG   ++AAL  +AVW++R+      LL P  ES +   VT +            +S G + L+SL   +T V L GHRS VTA R++         XXXXXXXXXXXXXXXXXXXXXXXXXX TD VF E D    G A        R         L +CSKDA VK+WDLDTQ C QT+     E
Sbjct:    1 MVKAYLRYEQARAFGVVASPEAPPVYDDTGKHLVTAALERLAVWDVRRGVEAKSLLPPPRESGALPAVTRIARAEGSDLVAAGHSDGTIRLWSLDDASTDVLLKGHRSEVTALRFNASGSMLVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXTDAVFAEADATAGGGAPSTGSSGVR---------LVTCSKDATVKVWDLDTQHCAQTVAALGAE 207          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A7S1XLU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU6_9STRA)

HSP 1 Score: 105 bits (261), Expect = 2.760e-22
Identity = 68/216 (31.48%), Postives = 98/216 (45.37%), Query Frame = 0
Query:   13 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGES-ASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            M +TYLRY     FGV+A+P+ N+++     LA++ +L DV VW+L+Q SL+R L+PE  +  ++ +    L           Y+SG+L +F   TG   +  HGHRSAVT                                        VT V FL+  G     A +               G+ S S+DALVK+WD+  Q C+QT+ GHR E
Sbjct:   34 MQRTYLRYVPEHAFGVIATPRGNSLYAEGDQLALTPSLRDVGVWHLKQGSLLRRLTPESTTPGTEAEEVASLTLLPGGRVAAGYTSGVLRVFDYKTGTQELAFHGHRSAVTCADGTADGAFLATGASDTDVVVWDAVAETGVCRLRGHRGAVTAVAFLQPKGSGGNGAGFF--------------GVVSASQDALVKVWDVAAQHCLQTVTGHRAE 235          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A7S3MF43_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MF43_9STRA)

HSP 1 Score: 102 bits (254), Expect = 2.470e-21
Identity = 70/216 (32.41%), Postives = 98/216 (45.37%), Query Frame = 0
Query:   15 KTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLS---PEGESASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            K+YLRYE  + FGV+ASPQ NA +D TGNLA + A+ +V  WNLRQ   V  LS   P     + G VT L            Y++G++ +++ +    V TL GHRS +++  +                                    +T V FL+   ++                      L S SKD L+K+WDL+TQ CVQT+VGHR E
Sbjct:    2 KSYLRYEPKKQFGVIASPQCNAQYDYTGNLAFTGAIQEVCGWNLRQSVQVNKLSFDEPSYPFRTGGDVTILQTSSSKPIIAVGYTNGIVRIYNYLNETLVATLKGHRSMISSLCFDEESVTLVSGGADSDIVLWDLVSYTALCRLRGHKDAITGVSFLKTPQQQY---------------------LVSVSKDTLLKVWDLETQCCVQTVVGHRCE 196          
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A433A2H4_9FUNG (WD40-repeat-containing domain protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433A2H4_9FUNG)

HSP 1 Score: 98.2 bits (243), Expect = 5.740e-21
Identity = 76/233 (32.62%), Postives = 101/233 (43.35%), Query Frame = 0
Query:   13 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESASKGQVTNLL------------------LXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 227
            M K YLRYE   TFG++AS QSNAI++  G LAI+ AL DV VW+L++ + V   +   ES +K +VT +                   L          Y+ G + L+S  T    VT +GHRSAVTA  +                                    +T + FL        A    +  T         N L S SKD L+KLWDL TQ CV+T++ HRGE
Sbjct:    1 MVKAYLRYEPKATFGIIASVQSNAIYNRDGKLAIAPALEDVVVWDLKKGTQV---AKWHESTNKAEVTCIARSPNEVDYAVGYVFFSPALHHSRMNPFVPYNDGSIRLWSFKTSTCSVTFNGHRSAVTALAFDKNGTRLASGSRDTDLIVWDVVGEVGLYRLRGHKDQITCLYFLTRPTATDSATDATNATTTTA----TSNYLLSSSKDTLLKLWDLTTQHCVETLIAHRGE 226          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KT12_9PHAE2.630e-7664.22Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LS39_ECTSI3.070e-6762.96Utp12 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A835Z9P3_9STRA8.700e-4243.26WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6U0TFN6_9STRA7.190e-2836.07Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A5D6Y6H3_9STRA2.910e-2640.47Utp12 domain-containing protein n=1 Tax=Pythium br... [more]
A0A2P6VAW5_9CHLO2.510e-2550.92WD repeat-containing 3 n=1 Tax=Micractinium conduc... [more]
C1EGB1_MICCC8.460e-2346.30Utp12 domain-containing protein (Fragment) n=1 Tax... [more]
A0A7S1XLU6_9STRA2.760e-2231.48Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S3MF43_9STRA2.470e-2132.41Hypothetical protein n=2 Tax=Spumella elongata Tax... [more]
A0A433A2H4_9FUNG5.740e-2132.62WD40-repeat-containing domain protein (Fragment) n... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 60..104
e-value: 5.9
score: 12.1
coord: 107..146
e-value: 6.7E-8
score: 42.3
coord: 149..211
e-value: 2.5E-4
score: 30.4
IPR001680WD40 repeatPFAMPF00400WD40coord: 109..146
e-value: 6.3E-6
score: 26.8
coord: 153..211
e-value: 0.071
score: 14.0
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 198..220
score: 9.339
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 114..155
score: 14.418
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 190..229
e-value: 7.6E-7
score: 30.1
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 8..178
e-value: 1.2E-26
score: 95.6
NoneNo IPR availablePANTHERPTHR19853:SF0WD REPEAT-CONTAINING PROTEIN 3coord: 13..227
NoneNo IPR availablePANTHERPTHR19853WD REPEAT CONTAINING PROTEIN 3 WDR3coord: 13..227
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 198..212
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 133..147
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 72..229
score: 20.461
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 35..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:595414..596910 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2255.1mRNA_F-serratus_M_contig130.2255.1Fucus serratus malemRNAF-serratus_M_contig130 595414..596910 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig130.2255.1 ID=prot_F-serratus_M_contig130.2255.1|Name=mRNA_F-serratus_M_contig130.2255.1|organism=Fucus serratus male|type=polypeptide|length=230bp
LPKTRVLSSGKKMNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAAL
HDVAVWNLRQCSLVRLLSPEGESASKGQVTNLLLSPSGNTVAAGYSSGLL
LLFSLITGNTVVTLHGHRSAVTAGRYHPSGALLASGSADTDIVVWDTVSE
SGLYRLKGHRDGVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLAS
CSKDALVKLWDLDTQSCVQTIVGHRGEAS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf