mRNA_F-serratus_M_contig130.2255.1 (mRNA) Fucus serratus male
|
Overview
Homology
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A6H5KT12_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT12_9PHAE) HSP 1 Score: 238 bits (608), Expect = 2.630e-76 Identity = 140/218 (64.22%), Postives = 147/218 (67.43%), Query Frame = 1
Query: 37 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESA-SKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGEAS 687
MNKTYLRYELSETFGVVASPQSN ++DSTGNLAISAALH+VAVWNLRQCSLVRLLSPEGESA S+ QVT+LLL YSSGL+LLFSL TG T VTLHGHRSAVTA RYH VTDVVFLEG G G A GG RL NGLASCSKD LVKLWDLDTQSCVQT+VGHRGE S
Sbjct: 1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHEVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGRTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLEGGG---GGAP---GGC------RLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGEVS 206
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: D8LS39_ECTSI (Utp12 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS39_ECTSI) HSP 1 Score: 233 bits (594), Expect = 3.070e-67 Identity = 136/216 (62.96%), Postives = 142/216 (65.74%), Query Frame = 1
Query: 37 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESA-SKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
MNKTYLRYELSETFGVVASPQSN ++DSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESA S+ QVT+LLL YSSGL+LLFSL TG T VTLHGHRSAVTA RYH VTDVVFL G GG RL NGLASCSKD LVKLWDLDTQSCVQT+VGHRGE
Sbjct: 1 MNKTYLRYELSETFGVVASPQSNVVYDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAASRAQVTSLLLSPDGSTVAAGYSSGLVLLFSLKTGATAVTLHGHRSAVTAARYHASGALLASGSADTDIVVWDAVAESGLYRLRGHRDGVTDVVFLGSGGXXXXXVV--PGGC------RLRNGLASCSKDTLVKLWDLDTQSCVQTVVGHRGE 208
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A835Z9P3_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9P3_9STRA) HSP 1 Score: 161 bits (407), Expect = 8.700e-42 Identity = 93/215 (43.26%), Postives = 118/215 (54.88%), Query Frame = 1
Query: 43 KTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAS--KGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
KTYLRY L +TFGV+AS QSNA+FD TGNLAI+AAL +VAVWNLRQ +L+R+L PEG+ A+ KGQV+ L L Y++G++ ++ + TG V +GH+SAVTA R++ VTDV FL G L G SCSKD LVK+WDL+TQ CVQT+VGHR E
Sbjct: 2 KTYLRYVLHDTFGVIASTQSNAVFDKTGNLAITAALQEVAVWNLRQGTLLRMLKPEGDEATIAKGQVSYLALSPNGRRVAAGYTTGVIRVYDVATGAMAVAFNGHKSAVTAARFNDGGALLISGGADTDVILWDMVAERGECRLRGHRDGVTDVAFLPAGGA-------------------LARGAVSCSKDTLVKIWDLETQHCVQTVVGHRSE 197
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A6U0TFN6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A6U0TFN6_9STRA) HSP 1 Score: 121 bits (303), Expect = 7.190e-28 Identity = 79/219 (36.07%), Postives = 108/219 (49.32%), Query Frame = 1
Query: 31 KKMNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESAS--KGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
K MN+TYLRY ++FGV+ +P+ N+I + +LAI+ AL D AVWNL+Q SLV+ L PEG S + + + LL Y+SGLL +FSL G + LHGHR+ VTA +T V FL+G R+SG + GL S S+DAL+K+WD+ Q C+QT+ GHR E
Sbjct: 22 KSMNRTYLRYVPQQSFGVICTPRGNSILGESEDLAITPALRDAAVWNLKQGSLVKRLRPEGGSGGVQEAEEVSQLLLLGRDRVAAGYTSGLLRVFSLSEGRQELALHGHRTEVTALSCSTDAAFLATGAKDTDVVVWDTISETGVCRLKGHRHAITAVSFLQG--RDSGTSVGFF-------------GLVSASQDALLKIWDVTAQHCLQTVTGHRAE 225
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A5D6Y6H3_9STRA (Utp12 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y6H3_9STRA) HSP 1 Score: 116 bits (291), Expect = 2.910e-26 Identity = 87/215 (40.47%), Postives = 102/215 (47.44%), Query Frame = 1
Query: 37 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
M K+YLRYE FGVVA+ N IFD TG LAI+ AL DV VWN+RQ S VR L +G GQ T L L YS+G + +F L TG VTL GH SAV A + V D+V G R G +KD T R L + SKD+L+K+WDLDTQ CVQT VGHR E
Sbjct: 1 MVKSYLRYERETAFGVVAAAAGNVIFDRTGRLAIAPALKDVVVWNVRQGSFVRALRGDG-----GQATALALSPDGALVAAGYSTGAVRVFRLATGALEVTLDGHASAVEALAF-----------------GARGGAAVLASGARDTDVIVWDLVSQTGLFRLKG---HKDAVTALRFVGERDARLVTASKDSLLKVWDLDTQHCVQTCVGHRSE 190
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A2P6VAW5_9CHLO (WD repeat-containing 3 n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VAW5_9CHLO) HSP 1 Score: 114 bits (284), Expect = 2.510e-25 Identity = 111/218 (50.92%), Postives = 137/218 (62.84%), Query Frame = 1
Query: 37 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESASK--GQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGD-GRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
M K YLRYEL+ T+GVVAS N ++D G ++ AL +VAVWN++Q +LV+ L P + K G+VT + Y+ G + L+ L G T GHR V+A R+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX VVF+EG G ++GA+ G +R L S SKD LVK+WDLDTQ C QT+V HRGE
Sbjct: 1 MVKAYLRYELAGTWGVVASSNCNVVYDRGGRYLLTGALENVAVWNVKQAALVKTLVPPISQSGKVAGEVTQIAASPTANQIAVGYADGTIRLWDLDAGECTATFSGHRKEVSALRFSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVFVEGGAGGQAGAS-----GARR---------LVSASKDELVKVWDLDTQHCCQTVVAHRGE 204
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: C1EGB1_MICCC (Utp12 domain-containing protein (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1EGB1_MICCC) HSP 1 Score: 106 bits (265), Expect = 8.460e-23 Identity = 100/216 (46.30%), Postives = 122/216 (56.48%), Query Frame = 1
Query: 37 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQ-CSLVRLLSPEGESASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
M K YLRYE + FGVVASP++ ++D TG ++AAL +AVW++R+ LL P ES + VT + +S G + L+SL +T V L GHRS VTA R++ XXXXXXXXXXXXXXXXXXXXXXXXXX TD VF E D G A R L +CSKDA VK+WDLDTQ C QT+ E
Sbjct: 1 MVKAYLRYEQARAFGVVASPEAPPVYDDTGKHLVTAALERLAVWDVRRGVEAKSLLPPPRESGALPAVTRIARAEGSDLVAAGHSDGTIRLWSLDDASTDVLLKGHRSEVTALRFNASGSMLVSGXXXXXXXXXXXXXXXXXXXXXXXXXXXTDAVFAEADATAGGGAPSTGSSGVR---------LVTCSKDATVKVWDLDTQHCAQTVAALGAE 207
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A7S1XLU6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XLU6_9STRA) HSP 1 Score: 105 bits (261), Expect = 2.760e-22 Identity = 68/216 (31.48%), Postives = 98/216 (45.37%), Query Frame = 1
Query: 37 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGES-ASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
M +TYLRY FGV+A+P+ N+++ LA++ +L DV VW+L+Q SL+R L+PE + ++ + L Y+SG+L +F TG + HGHRSAVT VT V FL+ G A + G+ S S+DALVK+WD+ Q C+QT+ GHR E
Sbjct: 34 MQRTYLRYVPEHAFGVIATPRGNSLYAEGDQLALTPSLRDVGVWHLKQGSLLRRLTPESTTPGTEAEEVASLTLLPGGRVAAGYTSGVLRVFDYKTGTQELAFHGHRSAVTCADGTADGAFLATGASDTDVVVWDAVAETGVCRLRGHRGAVTAVAFLQPKGSGGNGAGFF--------------GVVSASQDALVKVWDVAAQHCLQTVTGHRAE 235
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A7S3MF43_9STRA (Hypothetical protein n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MF43_9STRA) HSP 1 Score: 102 bits (254), Expect = 2.470e-21 Identity = 70/216 (32.41%), Postives = 98/216 (45.37%), Query Frame = 1
Query: 43 KTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLS---PEGESASKGQVTNLLLXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
K+YLRYE + FGV+ASPQ NA +D TGNLA + A+ +V WNLRQ V LS P + G VT L Y++G++ +++ + V TL GHRS +++ + +T V FL+ ++ L S SKD L+K+WDL+TQ CVQT+VGHR E
Sbjct: 2 KSYLRYEPKKQFGVIASPQCNAQYDYTGNLAFTGAIQEVCGWNLRQSVQVNKLSFDEPSYPFRTGGDVTILQTSSSKPIIAVGYTNGIVRIYNYLNETLVATLKGHRSMISSLCFDEESVTLVSGGADSDIVLWDLVSYTALCRLRGHKDAITGVSFLKTPQQQY---------------------LVSVSKDTLLKVWDLETQCCVQTVVGHRCE 196
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Match: A0A433A2H4_9FUNG (WD40-repeat-containing domain protein (Fragment) n=2 Tax=Jimgerdemannia flammicorona TaxID=994334 RepID=A0A433A2H4_9FUNG) HSP 1 Score: 98.2 bits (243), Expect = 5.740e-21 Identity = 76/233 (32.62%), Postives = 101/233 (43.35%), Query Frame = 1
Query: 37 MNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALHDVAVWNLRQCSLVRLLSPEGESASKGQVTNLL------------------LXXXXXXXXXXYSSGLLLLFSLITGNTVVTLHGHRSAVTAGRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTDVVFLEGDGRESGAATYKDGGTQRRRRRRLPNGLASCSKDALVKLWDLDTQSCVQTIVGHRGE 681
M K YLRYE TFG++AS QSNAI++ G LAI+ AL DV VW+L++ + V + ES +K +VT + L Y+ G + L+S T VT +GHRSAVTA + +T + FL A + T N L S SKD L+KLWDL TQ CV+T++ HRGE
Sbjct: 1 MVKAYLRYEPKATFGIIASVQSNAIYNRDGKLAIAPALEDVVVWDLKKGTQV---AKWHESTNKAEVTCIARSPNEVDYAVGYVFFSPALHHSRMNPFVPYNDGSIRLWSFKTSTCSVTFNGHRSAVTALAFDKNGTRLASGSRDTDLIVWDVVGEVGLYRLRGHKDQITCLYFLTRPTATDSATDATNATTTTA----TSNYLLSSSKDTLLKLWDLTTQHCVETLIAHRGE 226 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2255.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2255.1 >prot_F-serratus_M_contig130.2255.1 ID=prot_F-serratus_M_contig130.2255.1|Name=mRNA_F-serratus_M_contig130.2255.1|organism=Fucus serratus male|type=polypeptide|length=230bp LPKTRVLSSGKKMNKTYLRYELSETFGVVASPQSNAIFDSTGNLAISAALback to top mRNA from alignment at F-serratus_M_contig130:595414..596910- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig130.2255.1 ID=mRNA_F-serratus_M_contig130.2255.1|Name=mRNA_F-serratus_M_contig130.2255.1|organism=Fucus serratus male|type=mRNA|length=1497bp|location=Sequence derived from alignment at F-serratus_M_contig130:595414..596910- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig130:595414..596910- >mRNA_F-serratus_M_contig130.2255.1 ID=mRNA_F-serratus_M_contig130.2255.1|Name=mRNA_F-serratus_M_contig130.2255.1|organism=Fucus serratus male|type=CDS|length=1380bp|location=Sequence derived from alignment at F-serratus_M_contig130:595414..596910- (Fucus serratus male)back to top |