mRNA_F-serratus_M_contig130.2234.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: A0A6H5JR06_9PHAE (FMN protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR06_9PHAE) HSP 1 Score: 231 bits (589), Expect = 1.860e-66 Identity = 131/172 (76.16%), Postives = 140/172 (81.40%), Query Frame = 1
Query: 115 GMLRQPPRPGFPKKSKDKRRKLHWKIIPQARLQTAQESIWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEGPKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKVP 630
GM R RP PKK KDKRRKLHWK IP ARLQ A ESIW E ++DIQID EEFE+LWVEKAE VAAKKK E DVKK E PKE+SLLD KRAMNTSIAIARI+M +AETRQA+MNMDET LSSNV+QSLQEFMPTKEEE LLN+NGD ALLG AEKFMLEMIKVP
Sbjct: 3056 GMARXXXRPAGPKKPKDKRRKLHWKTIPHARLQKA-ESIWMETEVATDIQIDLEEFEELWVEKAEKVAAKKKLEEAKKKDVKK-EAPKEISLLDGKRAMNTSIAIARIKMTYAETRQAVMNMDETVLSSNVLQSLQEFMPTKEEEKTLLNYNGDPALLGNAEKFMLEMIKVP 3225
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: D8LT97_ECTSI (Formin-like 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT97_ECTSI) HSP 1 Score: 224 bits (571), Expect = 4.780e-64 Identity = 127/172 (73.84%), Postives = 137/172 (79.65%), Query Frame = 1
Query: 115 GMLRQPPRPGFPKKSKDKRRKLHWKIIPQARLQTAQESIWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEGPKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKVP 630
GM R RP PKK KDKRRKLHWK IP ARLQ ESIW E ++DIQID EEFE+LWVEKAE VA KKK + DVKK E PKE+SLLD KRAMNTSIAIARI+M +AETRQA+MNMDET LSSNV+QSLQEFMPT EEE LLN+NGD ALLG AEKFMLEMIKVP
Sbjct: 2184 GMARXXXRPAGPKKPKDKRRKLHWKTIPHARLQKT-ESIWMETEVATDIQIDLEEFEELWVEKAEKVAPKKKLDEAKKKDVKK-EAPKEISLLDGKRAMNTSIAIARIKMTYAETRQAVMNMDETVLSSNVLQSLQEFMPTTEEEKTLLNYNGDPALLGNAEKFMLEMIKVP 2353
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: A0A1V9YVV8_9STRA (Formin-homology 2 domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9YVV8_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 8.040e-20 Identity = 60/156 (38.46%), Postives = 98/156 (62.82%), Query Frame = 1
Query: 166 KRRKLHWKIIPQARLQTAQES-IWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEGPKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKVP 630
+R+KL W+ IP+ RL++ ++S IW A +E +++D +E E L+ KA+ A KK A K +G + ++L+D KRAMNT+IA+ARI++++ + AI N D L+ + +++E++PT EE ++ ++GD LG AEKF L M VP
Sbjct: 1254 RRKKLFWQPIPEDRLKSVKQSTIWEAKDEEIKLEMDMDEIESLFFAKADPKAIKKVA--------KPVQGKQAITLVDGKRAMNTAIALARIKLSYTQIAGAIRNYDACGLTLEQLVTVKEYLPTDEEVGVVKRYSGDPKSLGEAEKFFLAMAGVP 1401
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: A0A484DUN6_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DUN6_BRELC) HSP 1 Score: 96.7 bits (239), Expect = 1.450e-19 Identity = 56/159 (35.22%), Postives = 97/159 (61.01%), Query Frame = 1
Query: 154 KSKDKRRKLHWKIIPQARLQTA-QESIWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEGPKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKV 627
K K R+KLHW+ I + R+ +++IW E+ + ++D EE E L+ + +AK + +++K+ V+L+D KRAMN +I++AR++++++E A+ D T LS + + EF+PTKEE +++ + GDK LLG AEKF+ E+ K+
Sbjct: 900 KPKRARKKLHWQAISEERISNINKQTIWEDENENVNFEMDMEELEALFFANSNTRSAKSNSTFGQSKPIQRKQ---TVTLIDGKRAMNAAISLARVKLSYSEIADAVAKFDPTGLSLEQLIGISEFLPTKEEIVLVCGYVGDKELLGEAEKFITEIAKL 1055
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: A0A1V9ZJH8_9STRA (Formin-homology 2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZJH8_9STRA) HSP 1 Score: 85.9 bits (211), Expect = 7.800e-16 Identity = 58/168 (34.52%), Postives = 91/168 (54.17%), Query Frame = 1
Query: 148 PKKSKDKRRKLHWKIIPQARLQTAQES-IWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEGPKE------VSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKVP 630
PK +R+KL W+ IP+ RL+ +S IW A + +++D +E E L+ K D KK PK V+L+D KRAMN +IA+ARI+++HA+ A+ + D LS + ++ E++PT +E ++ ++GD LG AE+F L M VP
Sbjct: 1080 PKPKPVRRKKLFWQPIPEDRLKNGHQSTIWEAKGDEIKLEMDMDEIESLFFAKV---------------DKSKKTAPKALQRKQAVTLVDGKRAMNAAIALARIKLSHAQLAAAVASYDAGGLSLEQLVTINEYLPTADEVGVVQRYSGDPDTLGEAERFFLAMATVP 1232
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: A0A024TI59_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TI59_9STRA) HSP 1 Score: 80.5 bits (197), Expect = 5.480e-14 Identity = 59/174 (33.91%), Postives = 93/174 (53.45%), Query Frame = 1
Query: 121 LRQPPRPGFPKKSKDK----RRKLHWKIIPQARLQTAQESIWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEGPKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKVP 630
+++P P PKK K R L W IP + Q ++W + SD ++ E F+ W+ + A KK + KKK+ V LLD+K N IAIAR +++ AE + +++MD+ A++ + + SL PT EE+ +L N++G +LGG EKF LEM+ +P
Sbjct: 547 VKKPDEPVLPKKESVKPNVDMRALFWTRIP---VNVVQSTVWNTL---SDTKVPLENFDLEWMFRKNPDATKKPDDDAF----KKKKENTAVLLLDSKTQQNVGIAIARFKLSPAEVKAGLLSMDKDAITVDHLSSLIALAPTLEEQDILKNYDGPVDVLGGVEKFFLEMLSIP 710
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: A0A0D3EH05_BRAOL (Formin-like protein n=4 Tax=Brassica TaxID=3705 RepID=A0A0D3EH05_BRAOL) HSP 1 Score: 74.3 bits (181), Expect = 7.110e-12 Identity = 34/86 (39.53%), Postives = 59/86 (68.60%), Query Frame = 1
Query: 373 PKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKVP 630
P+++ L+D +RA NT I +A+++M + A++ MD+T L + +++L +F PT EE +L N+ GDK +LG E++ LE++KVP
Sbjct: 769 PEKIQLIDLRRANNTEIMLAKVKMPLPDMMAAVLAMDDTVLDIDQIENLVKFCPTNEEMELLKNYTGDKEMLGKCEQYFLELMKVP 854
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: B7FZT7_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FZT7_PHATC) HSP 1 Score: 73.6 bits (179), Expect = 1.400e-11 Identity = 56/175 (32.00%), Postives = 94/175 (53.71%), Query Frame = 1
Query: 154 KSKDKRRKLHWKIIPQARLQTAQESIWAAVEESSDIQ---IDQEEFEQLW-VEKAEVVAAKKKAEXXXXXDVKKKEGPKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGA-------------EKFMLEMIKV 627
K +R +LHWK + + S+WA +++ +++ ID+EEF++L+ VEK+E V K A V ++ V ++DAKRA N I +AR++M+H + A+ ++E ALS+ ++ + EF+PTK+E L + +LGG EKFM+ M+ V
Sbjct: 1679 KDSHRRARLHWKTLRKV----TSNSLWAQIDQDDELENIDIDEEEFQELFQVEKSETVTPVKAA-------VVTEKSSASVRVIDAKRANNGGIILARLKMSHDDMADAVDRINEHALSAEQIEKMIEFLPTKDERKAL-----EAYMLGGGQDAAEKFEGLCECEKFMVSMMTV 1837
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: UPI0006451BBA (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006451BBA) HSP 1 Score: 73.2 bits (178), Expect = 1.700e-11 Identity = 53/157 (33.76%), Postives = 87/157 (55.41%), Query Frame = 1
Query: 166 KRRKLHWKIIPQARLQTAQESIWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEG--PKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLN-FNGDKALLGGAEKFMLEMIKV 627
K R+LHW +IP+ +L+ E+ W ++ + DQ EQ W ++ K + K G P V+LLD +RA N I +A+ ++++A+ ++AI++ DE LS + ++ +P EEE LN FNGD+A LG AE+F +EM+ +
Sbjct: 463 KMRQLHWSVIPKDKLK---ETFWDSLSPVKSNEKDQSLVEQ-WFS----LSPPPKPVGGLKDKLAGKSGGAPTIVNLLDLRRANNACILLAQFKLSYADIKEAILSCDEQRLSVEQLIAIDAMLPITEEEAKKLNAFNGDRATLGNAERFFIEMMAI 611
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Match: A0A1V9YFX1_9STRA (Formin-homology 2 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YFX1_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 7.440e-11 Identity = 50/159 (31.45%), Postives = 87/159 (54.72%), Query Frame = 1
Query: 154 KSKDKRRKLHWKIIPQARLQTAQESIWAAVEESSDIQIDQEEFEQLWVEKAEVVAAKKKAEXXXXXDVKKKEGPKEVSLLDAKRAMNTSIAIARIRMAHAETRQAIMNMDETALSSNVVQSLQEFMPTKEEEMMLLNFNGDKALLGGAEKFMLEMIKVP 630
K+K K R L+W+ + + S+W+ +E S + Q + + L+ AA A+ V KK + V+L+DAKRA N I +AR R+ +AE ++A++ +D L++ + +L +F P EE + ++ G++ LLG AE++ LE+ VP
Sbjct: 233 KAKPKLRNLYWEPVAAP----TEASLWSKIELSEEHQKELDSLTTLFA------AAPPAADKEKKKPVAKKAATR-VALIDAKRANNLGIMLARFRLPYAEIKRAVLEIDRDVLTTEKISALIQFAPEGEELETVKSYTGERKLLGDAEQYFLEISTVP 380 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2234.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2234.1 >prot_F-serratus_M_contig130.2234.1 ID=prot_F-serratus_M_contig130.2234.1|Name=mRNA_F-serratus_M_contig130.2234.1|organism=Fucus serratus male|type=polypeptide|length=209bp MPPPLPGMARGPGGLPPPPPLPGMGGVTRGLPPLPPRGMLRQPPRPGFPKback to top mRNA from alignment at F-serratus_M_contig130:166583..169533- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig130.2234.1 ID=mRNA_F-serratus_M_contig130.2234.1|Name=mRNA_F-serratus_M_contig130.2234.1|organism=Fucus serratus male|type=mRNA|length=2951bp|location=Sequence derived from alignment at F-serratus_M_contig130:166583..169533- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig130:166583..169533- >mRNA_F-serratus_M_contig130.2234.1 ID=mRNA_F-serratus_M_contig130.2234.1|Name=mRNA_F-serratus_M_contig130.2234.1|organism=Fucus serratus male|type=CDS|length=1254bp|location=Sequence derived from alignment at F-serratus_M_contig130:166583..169533- (Fucus serratus male)back to top |