mRNA_F-serratus_M_contig130.2232.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A6H5JRH3_9PHAE (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRH3_9PHAE) HSP 1 Score: 497 bits (1280), Expect = 7.330e-164 Identity = 305/580 (52.59%), Postives = 361/580 (62.24%), Query Frame = 3
Query: 204 EARERDALFGASARRSAADSPSPMGHDSRTEA------SLALGGVTGGG---WDAPSAATWIGMTRPQQDGQQLGQLSWAEVRKKVDVAERQRGLRLAYESVEVGRETLEHLEDQKEKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSDDTQIPQTYRNYATNTAVSAMAA-------DDDTPVEGFICPDCRRRFDSSDTLVEHFGSAHAERDHESYSGERAVVGAPGAAVEAGVEATAAYRDVARANNTNRGRGEAKIEKDAASDSLRGQLFGGRSGAVGATASNNYPTEGTGVGRR----GIIAEQKAVMDEQNQYLESVGRAVSELGLLGRNIGASLDAQEGTLGRVAEKTEETDDRAAFVTRKAARQAQSSKPKQPTFLMSVALQEVTSGQFLTVIGEDVVLQETELRNVCRFEAWQRQDGIVGLKSGVTRRWLGQTWLGYLRVSGSRFGKTYEWQANLMRRETTMVCCSANWGAGGYLSVRPGATNIDTPASAASDDPRKRDGAPXXXXXXXXXXXXXSGSSYTYDRRELMFIDATPPNRLRAAVFRVVNCDGYTPQRFVGGRLMRNP 1883
E +R+ALFG S+ R +A P G + + A S GG GG + S + + G L WA+VR +DV ER+RGLR A+ESVEVGRE LE L+DQKE+L+RSE+VLDST+YA+ERSARVLRGMTFWGKI+NAFS+D ++PQ A NT D D P EGFICPDCR F +SD LV H G AH + R GA G A + Y + + G I + +S SL+ QLFGGR G G A G R+ G+IAEQKAVM Q+ YL+SVG+AV ELGLLGRNIG SLD Q TL RVAEK+ E +DR AFVTRKAARQAQSSKP PTF+MS+ALQEVT+G +L V GE+VVLQ ELRNVCRFEAW+RQ GI+GLKS VTR+WLGQT+LGYLRVSGS FGK +EWQA+L +ETTMVCCSANWGAGGYLS RP T+I R D +G + EL +DAT NR RAAVFR+VNCDGYTPQ FVGG+LMRNP
Sbjct: 2 ENADREALFGESSSRRSASPPDTAGASASSGAGSNQASSHRHGGAMGGRIQHYSDGSPDVRGNLEQQXXXXXXSGPLLWAQVRDSIDVTERRRGLRSAHESVEVGREALERLDDQKERLERSEMVLDSTRYAIERSARVLRGMTFWGKIRNAFSNDPEVPQ---QPAGNTRAGTATGNGGNGNYDPDVPAEGFICPDCRGLFPTSDALVAHHGLAHTIASADDDEDARGW-GAGGGATQ--------YGXXXXXXDVSGGSHGGPIPEPGSSTSLKDQLFGGREGWSGQRAG--------GAERKXXXXGVIAEQKAVMASQDAYLDSVGQAVKELGLLGRNIGESLDGQGATLDRVAEKSSEANDRTAFVTRKAARQAQSSKPNNPTFVMSLALQEVTTGLYLAVTGEEVVLQGRELRNVCRFEAWERQHGIMGLKSSVTRKWLGQTFLGYLRVSGSSFGKNHEWQADLRGKETTMVCCSANWGAGGYLSSRPNGTSI-----------RMGDTTLEGSTAASGGSKTNNGRDSAAEMAELSLVDATLANRPRAAVFRLVNCDGYTPQPFVGGKLMRNP 550
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: D8LT98_ECTSI (Conserved C2H2 zinc finger protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT98_ECTSI) HSP 1 Score: 306 bits (784), Expect = 2.760e-91 Identity = 220/500 (44.00%), Postives = 255/500 (51.00%), Query Frame = 3
Query: 399 GQLSWAEVRKKVDVAERQRGLRLAYESVEVGRETLEHLEDQKEKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSDDTQIPQT---YRNYATNTAVSAMAADD-DTPVEGFICPDCRRRFDSSDTLVEHFGSAHAERDHESYSGERAVVGAPGAAVEAGVEATAAYRDVARANNTNRGRGEAKIEKDAASDSLRGQLFGGRSGAVGATASNNYPTEGTGVGRRGIIAEQKAVMDEQNQYLESVGRAVSELGLLGRNIGASLDAQEGTLGRVAEKTEETDDRAAFVTRKAARQA-QSSKPKQPTFLMSVALQEVTSGQFLTVIGEDVVLQETELRNVCRFEAWQRQDGIVGLKSGVTRRWLGQTWLGYLRVSGSRFGKTYEWQANLMRRETTMVCCSANWGAGGYLSVRPGATNIDTPASAASDDPRKRDGAPXXXXXXXXXXXXXSGSSYTYDRRELMFIDATPPNRLRAAVFRVVNCDGYTPQRFVGGRLMRNP 1883
G L WA+VR +DV ER+RGLR AYESVEVGRE LE L+DQKE+L+RSE+VLDST+YA+ERSAR+LRGMTFWGKI+NAFSDD Q+PQ T T DD DTP EGFICPDCR F +SD LV H+GSAH + G V G AG E G G K + G G G A P G VG V D Q GR GA L+AQE L D R+ A Q ++ + P L +GE L + + GI+GLKSGVTR+WLGQT+LGYLRVSGS FGK +EWQA+L R+ETTMVCCSANWGAGGYLSVRP T+I R D G + EL +DAT NR RAAVFR+VNCDGYTPQ FVGG+LMRNP
Sbjct: 76 GPLLWAQVRDSIDVTERRRGLRSAYESVEVGREALERLDDQKERLERSEMVLDSTRYAIERSARILRGMTFWGKIRNAFSDDPQVPQQPAGSTRAGTATGDGGNGNDDPDTPAEGFICPDCRGLFPTSDVLVAHYGSAHTIAE-----GGDGVAGRLPGFRRAGGE----------------GAGHPKPQ------------HWGEPGRAGGHAG---PGGGEVVGGE----RPHGVRDAQ-----------------GRASGAELEAQEPDLCHEPGAAGGVDGPVPCGHRRGGGAAGQGAEERLP----------------LRGVGETGTLGGSSSTH-----------GIIGLKSGVTRKWLGQTFLGYLRVSGSSFGKNHEWQADLRRKETTMVCCSANWGAGGYLSVRPSGTSI-----------RNGDTTLEGPTAASGGNTNNCGRDSAAEMAELSLVDATLANRPRAAVFRLVNCDGYTPQPFVGGKLMRNP 480
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A835YH57_9STRA (C2H2-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH57_9STRA) HSP 1 Score: 162 bits (411), Expect = 2.200e-39 Identity = 127/448 (28.35%), Postives = 202/448 (45.09%), Query Frame = 3
Query: 462 RLAYESVEVGRETLEHLEDQK----------------------EKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSDDTQIPQTYRNYATNTAVSAMAADDDTPVEGFICPDCRRRFDSSDTLVEHFGSAHAERDHESYSGERAVVGAPGAAVEAGVEATAAYRDVARANNTNRGRGEAKIEKDAASDSLRGQLFGGRSG--------AVGATASNNYPTEGTGVGRRGIIAEQKAVMDEQNQ--------------------------YLESVGRAV-SELGLLGRNIGASLDAQEGTLGRVAEKTEETDDRAAFVTRKAARQAQSSKPKQPTFLMSVALQEVTSGQFLTVIGEDVVLQETELRNVCRFEAWQRQDGIVGLKSGVTRRWLGQTWLGYLRVSGSRFGKTYEWQANLMR-----RETTMVCCSANWGAGGYLSV 1619
R A+E++ VG+ T+ LE Q E L RS +V+DST+Y L++SARV+RGMT WG++QN FSD+ P + + + S+ A +EG+ICP+CR R S+D L+ HF S H +++ E A + + + AA + L G+ GR G + G +A+ +G G+ EQ+ +M Q Y++++ V +L + +++G SL QE TL + + ++ DRA VTR+AA+ + +PT +VAL TSG +L +G +V L++ ++RNVC +E GI G KSGV+ WLG LG ++ S + F +WQ + + ++CC+ WG G Y+ V
Sbjct: 10 RQAFETISVGQGTVVELEQQHDACLYLYSNFRAILPLSLNVNAESLQRSAMVVDSTQYLLDKSARVIRGMTMWGRMQNFFSDEPA-PVLAASTPISNSTSSSAG-----MEGYICPECRMRCASADDLLAHFASLHEALHGNAHAEEPATISS---------------------------------REGAARNELFGEADKGRPGQGAWEQRSSTGCSANGADNRRNSGGSGSGLAQEQRNIMRSQQAMFVTSITLILTSAIAFICGGPPPEQAYIDTLSSTVLPQLQHVTQSLGTSLAEQEHTLDYLHDGADKASDRALAVTRQAAKMTR----LKPTASGTVALLHCTSGAYLAAVGSEVTLKQRQIRNVCLWERHSTSGGICGFKSGVSGLWLGVGMLGGIQCSAATFKSWEQWQCDALAPGDPDESVRLICCAGGWGKGSYVKV 414
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A4D9CSU3_9STRA (t-SNARE coiled-coil homology domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CSU3_9STRA) HSP 1 Score: 149 bits (375), Expect = 1.210e-34 Identity = 126/395 (31.90%), Postives = 191/395 (48.35%), Query Frame = 3
Query: 459 LRLAYESVEVGRETLEHLEDQKEKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSDDTQIPQTYRNYATNTAVSAMAADDDTPVEGFICPDCRRRFDSSDTLVEHFGSAHAERDHESYSGERAVVGAPGAAVEAGVEATAAYRDVARANNTNRGRGEAKIEKDAASDSLRGQLFGGR-SGAVGATASNNYPTEGTGVGRRGIIAEQKAVMDEQNQYLESVGRAVSELGLLGRNIGASLDAQEGTLGRVAEKTEETDDRAAFVTRKAARQAQSSK---PKQPTFLMSVALQEVTSGQFLTVIGEDVVLQETELRNVCRFEAWQRQDGIVGLKSGVTRRWLGQTWL-GYLRVSGSRFGKTYEWQANLMRRETT-MVCCSANWGAGGYLSVRP 1625
LR+A+ESV +GRETL + Q+E LDRSE V+DS Y +++SAR LRGMT+WG ++N FS++ + P+ T T ++ A G P G ER E++S + + +RD R +N + E R +LF R +G G G +A Q+ YLES+G+++ E +G + +L Q + R+ +E +D V RKAAR +++ ++P VA +EV SG F++V GE++ LQE + C+F A+ Q + GL+S ++R+WLGQ W+ G L V G+ GK EW+ + R E ++ CSANWG+GGYL P
Sbjct: 62 LRVAHESVAIGRETLTAVAGQQEALDRSEAVVDSNLYVIKKSARTLRGMTWWGSLRNYFSEEPEAPRP----RTPTWLADRRA-------GLRGP----------------GQQAGERT-EAHSSDAPL-----------------WRDQPRDGCSNPVKDE------------RQELFARRVNGETADARLKRAHVAGQGPQSLSEVARM------QDDYLESLGKSLDEQRGIGGTLHEALREQRVQVDRLEAGSEGLEDATRAVIRKAARASRARGGWGAERPRLYKFVAFREVRSGLFISVAGEELRLQEPHMSKACQFAAYTSQT-LTGLQSVLSRKWLGQHWISGALGVRGTGLGKNEEWEVDWRRPEGAFLLSCSANWGSGGYLMAFP 392
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A7S4INM8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4INM8_9STRA) HSP 1 Score: 108 bits (271), Expect = 3.260e-21 Identity = 110/414 (26.57%), Postives = 189/414 (45.65%), Query Frame = 3
Query: 462 RLAYESVEVGRETLEHLEDQKEKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSDDTQIPQTYRNYATNTAVSAMAADDDTPVEGFICPDCRRRFDSSDTLVEHFGSAHAERDHESYSGERAVVGAPGAAVEAGVEATAAYRDVARANNTNRGRGEA--------KIEKDAASDSLRGQLFGGRSGAVGA---TASNNYPTEGTGVGRRGIIAE------------QKAVMDEQNQYLESVGRAVSELGLLGRNIGASLDAQEGTLGRVAEKTEETDDRAAFVTRKAARQAQSSK-PKQPT-FLMSVALQEVTSGQFLTVI--GEDVVLQETELRNVCRFEAWQRQDGIVGLKSGVTRRWLGQTWLGYLRVSGSRFGKTYEWQANLMRRETT-MVCCSANWGAGGYLSV 1619
R A E++E+GR T + Q E+L R E + D KY ++R+AR+LRG T+ G + N F T +P+ T + + + D + D +F+S+ +V + HA + S A +A R + A + G+ E +K++A + LRG AVGA + S+N G ++ + +KA M Q+ +L ++ ++EL +GR++ + + L +A+K++ +D+ + RKA R + +K K P F + L+ + +G L G + +E W RQ +VGLK+ +RRWLGQ+ +GY+ S S FG++ EW+ + + ++C ANWGAGG+L +
Sbjct: 54 RAASEAIEIGRATAASVAAQGEQLSRVEDMADEQKYMIDRAARILRGRTWGGWVANMF---TSVPERPDRDGTESGNNQVVGVDGGCGADYEYIDVPPQFESAAQVVADY-RRHALLFLPACSTRDQKAACRAACDGLRDKARRELRALELAGANSGGQDEEGWGWYNVLSRDKESADEELRGINL-----AVGAKKESFSSNRAASAAPAGASALLEQSSLPTGYSDELSRKAAM--QDDHLSALSSDLNELQNIGRSLHETFNGHNEMLDTLADKSDNLEDQTKRIRRKADRLTERAKLRKTPAQFKELITLRNIETGLHLGCYDDGSSAPKLRSYDERASVWELWTRQGDVVGLKNRQSRRWLGQSMVGYVVCSASTFGRSEEWEFDDGDHQAKRLLCAGANWGAGGWLEI 456
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A7S2U9U1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2U9U1_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 9.580e-18 Identity = 61/187 (32.62%), Postives = 98/187 (52.41%), Query Frame = 3
Query: 1080 AEQKAVMDEQNQYLESVGRAVSELGLLGRNIGASLDAQEGTLGRVAEKTEETDDRAAFVTRKAARQAQSS--KPKQPTFLMSVALQEVTSGQFLTVIG--EDVVLQETELRNVCRFEAWQRQDGIV-GLKSGVTRRWLGQTWLGYLRVSGSRFGKTYEWQANLMRRETTMVCCSANWGAGGYLSVRP 1625
AE ++EQ ++L+S+ ++EL L ++I + D Q L + K E D V R+A + AQ S K +P VA++ + +G++L + +DVV+ E + F W R D GL++ T WLGQ G + S + +G+ EW +L + ++C SANWG GG++SVRP
Sbjct: 27 AETLEKLEEQEKHLDSLSNNLNELQYLSQSISQAFDDQSDVLDELDGKAEALTDETRLVIRRADQLAQKSLFKRTKPKMENLVAIRHMQTGKYLVIDRTIKDVVVGEFH-PELSVFSFWSRSDCTTFGLQNTCTNTWLGQVLGGGIACSSTSYGRREEWDMDLGEDTSALLCASANWGNGGWISVRP 212
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A7S2BIZ0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BIZ0_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 3.690e-15 Identity = 59/172 (34.30%), Postives = 96/172 (55.81%), Query Frame = 3
Query: 1029 SNNYPTEGTGVGRRGIIAEQKAVMDEQNQYLESVGRAVSELGLLGRNIGASLDAQEGTLGRVAEKTEETDDRAAFVTRKAARQAQSSKPKQPTFLMSVALQEVTSGQFLTVIGEDVVLQETELRNVCRFEAWQRQ-DGIVGLKSGVTRRWLGQTWLGYLRVSGSRFGKTYEW 1541
S N T GT G +A+Q+ + Q++YLE+ + E+ +G + ++ Q + + ++ ++ D +TR A R + K P +ALQ V SG++L ++GE++VL + +LRN R+EA +R DG+ GLKS V+RRW+GQ+ G +R S FG EW
Sbjct: 186 SANAATGGT----TGSVAQQQ--FEAQDRYLEAQLENIEEMSRMGTVMSGAIAGQIDQVNGMTDQVDDMQDETRALTRMAGRMHSKVRGK-PVMRGWIALQHVASGKYLDLVGEELVLAQ-QLRNTGRWEAHERDGDGVSGLKSVVSRRWVGQSMTGKIRCRASAFGTWEEW 349
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: K3WBG5_GLOUD (t-SNARE coiled-coil homology domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WBG5_GLOUD) HSP 1 Score: 72.4 bits (176), Expect = 1.040e-9 Identity = 46/116 (39.66%), Postives = 66/116 (56.90%), Query Frame = 3
Query: 459 LRLAYESVEVGRETLEHLEDQKEKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSD-DTQIPQTYRNYATNTAVSAMAADDDTPVEGFICPDCRRRFDSSDTLVEHFGSAH 803
LR ES+++ RET L Q E+LDRS+ + T+YA++ S RVLRGMT+ G + NA S Q+ Y+ N AM GFICP+C+ +F+S + L H+ +AH
Sbjct: 32 LRAVAESLQIARETAHTLSMQSEQLDRSKRAAEDTQYAVDLSKRVLRGMTWSGWLYNAMSSVPQQVADRYK--PANAEEIAM---------GFICPECKVKFNSPEQLGAHYANAH 136
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A0P1AC11_PLAHL (Conserved c2h2 zinc finger protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AC11_PLAHL) HSP 1 Score: 70.1 bits (170), Expect = 5.060e-9 Identity = 45/117 (38.46%), Postives = 67/117 (57.26%), Query Frame = 3
Query: 459 LRLAYESVEVGRETLEHLEDQKEKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSDDTQIPQTYRNYATNTAVSAMAADDDTPVEGFICPDCRRRFDSSDTLVEHFGSAHAE 809
LR ES+++GR T + L Q E+++RSE ++D T+ + + RVLRGMT+ G I N FS +PQ ++ N +A GFICPDC+ +F S+D L H+ + H E
Sbjct: 19 LRDTAESLQLGRSTAQVLSMQTEQINRSEKLVDETQATVAITKRVLRGMTWSGWIYNKFST---VPQ----FSDNNEQDQIAM-------GFICPDCKVKFQSADQLGRHYNNIHTE 121
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Match: A0A329SZB2_9STRA (Uncharacterized protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SZB2_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.190e-7 Identity = 43/115 (37.39%), Postives = 63/115 (54.78%), Query Frame = 3
Query: 459 LRLAYESVEVGRETLEHLEDQKEKLDRSEVVLDSTKYALERSARVLRGMTFWGKIQNAFSDDTQIPQTYRNYATNTAVSAMAADDDTPVEGFICPDCRRRFDSSDTLVEHFGSAH 803
LR ES+++GR T L Q E+L RSE ++D T+ ++ S RVLRGMT+ G + N S Q+ + + AM GFICP+C+ +F S+D L H+G+ H
Sbjct: 21 LRDTAESLQMGRATAHTLSMQAEQLGRSEGMVDETQATVDTSKRVLRGMTWSGWVYNKLSAVPQLSNSKEPHEI-----AM---------GFICPECKVKFQSADQLGMHYGNVH 121 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2232.1 >prot_F-serratus_M_contig130.2232.1 ID=prot_F-serratus_M_contig130.2232.1|Name=mRNA_F-serratus_M_contig130.2232.1|organism=Fucus serratus male|type=polypeptide|length=573bp MDEQEIPTPEARERDALFGASARRSAADSPSPMGHDSRTEASLALGGVTGback to top mRNA from alignment at F-serratus_M_contig130:142595..149761- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig130.2232.1 ID=mRNA_F-serratus_M_contig130.2232.1|Name=mRNA_F-serratus_M_contig130.2232.1|organism=Fucus serratus male|type=mRNA|length=7167bp|location=Sequence derived from alignment at F-serratus_M_contig130:142595..149761- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig130:142595..149761- >mRNA_F-serratus_M_contig130.2232.1 ID=mRNA_F-serratus_M_contig130.2232.1|Name=mRNA_F-serratus_M_contig130.2232.1|organism=Fucus serratus male|type=CDS|length=3438bp|location=Sequence derived from alignment at F-serratus_M_contig130:142595..149761- (Fucus serratus male)back to top |