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Homology
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: D8LTA6_ECTSI (SUN domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA6_ECTSI) HSP 1 Score: 287 bits (734), Expect = 9.200e-95 Identity = 163/250 (65.20%), Postives = 191/250 (76.40%), Query Frame = 1
Query: 1 AASTRSMVPDNEDDEEDGNGRAASPRQHTLQNYASRESGATMLESSAGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEWQQSSAEVREMQD-MMKKDSKAS-VGASSVGIN----------DSISSGGGGGSNANKGASM---PTPGGSPRS 705
AA+ R+MVPD EDD A P++ LQNYASR+SGA +LE+S SKGM NLL D KDKYAISPCED++WAVLGLSEDILVR++ I SHE+YSSL+K+FQVLAS TYPV EWLDLGT TAK VQGEQTFE+ QP FARYLKFKFLSH+G EFYCT++QVKVHGSTMLE+FQHEWQQSSAEVRE+QD MMKKD K S VG G ++++S GGGG++ G S TPG +P+S
Sbjct: 9 AATARAMVPDVEDD------GAKQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAVGTVGAGAGVGGGAADTTVEALASEGGGGAHGPTGVSNVEPATPGSAPKS 252
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A6H5JRG7_9PHAE (SUN domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG7_9PHAE) HSP 1 Score: 280 bits (717), Expect = 9.080e-84 Identity = 155/228 (67.98%), Postives = 183/228 (80.26%), Query Frame = 1
Query: 67 ASPRQHTLQNYASRESGATMLESSAGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEWQQSSAEVREMQD-MMKKDSK----ASVGASSVGIN-------DSISSGGGGGSNANKGASM---PTPGGSPRS 705
A P++ LQNYASR+SGA +LE+S SKGM NLL D KDKYAISPCED++WAVLGLSEDILVR++ I SHE+YSSL+K+FQVLAS TYPV EWLDLGT TAK VQGEQTFE+ QP FARYLKFKFLSH+G EFYCT++QVKVHGSTMLE+FQHEWQQSSAEVRE+QD MMKKD K A+VGA + G ++++S GGGG++ GAS TPG +P+S
Sbjct: 200 AQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAVATVGAGAGGEESAADTTVEALASEGGGGAHGPTGASNVEPATPGSAPKS 427
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A835YLS6_9STRA (UNC-like C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS6_9STRA) HSP 1 Score: 217 bits (553), Expect = 1.150e-68 Identity = 105/174 (60.34%), Postives = 132/174 (75.86%), Query Frame = 1
Query: 19 MVPDNEDDEEDGNGRAASPRQHTLQNYASRESGATMLESSAGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEWQQS 540
MVPD E+ G +A + L+NYAS++SGA M+E S G+KG NLL D KDKY ISPCE+++W V+GLSEDILVRTIK+ S+E+YS +VK+FQVLAS ++PV W+DLG TA GEQTFEL P FARYLKFK LSH+G ++YCTL+ V+VHGSTMLE+F +WQ S
Sbjct: 1 MVPDKEE------GDSAKLKPTKLKNYASKDSGAVMMEHSPGTKGADNLLVDSKDKYTISPCEEKQWVVIGLSEDILVRTIKLGSYEKYSRIVKEFQVLASQSFPVDNWMDLGVFTAADAHGEQTFELPSPAFARYLKFKLLSHYGDDYYCTLSHVRVHGSTMLESFHEDWQAS 168
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: B8CB42_THAPS (SUN domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB42_THAPS) HSP 1 Score: 197 bits (501), Expect = 2.720e-54 Identity = 100/177 (56.50%), Postives = 132/177 (74.58%), Query Frame = 1
Query: 37 DDEEDGNGRAASPRQHTLQNYASRESGATMLESSAGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKE--WLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEWQQSSAEVREM 561
D+ EDG P++H L +YAS+ +GA +LE S KG +NLL D DKYAI+PCE++++ V+GLSEDILV+ IK+S++ERYSS V++FQVLAS YP W DLGT TA S GEQTFEL +P +ARYLKF+F+SH+G E YCTL+Q+KVHGSTML+ F +W +S + RE+
Sbjct: 295 DEGEDG------PKEHVLVDYASKLAGAQILEKSPSLKGTSNLLTGDIDKYAIAPCEEKKYVVIGLSEDILVKRIKLSNYERYSSHVREFQVLASQEYPAPSEYWNDLGTYTALSKSGEQTFELNEPAWARYLKFRFMSHYGKEHYCTLSQIKVHGSTMLQGFHEQWIESEKKDREL 465
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A7S2UMH9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMH9_9STRA) HSP 1 Score: 184 bits (466), Expect = 3.720e-51 Identity = 83/154 (53.90%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 97 YASRESGATMLESSAGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEWQQSSAEVRE 558
YA++ SGA +LE S KG +NLL+DD D+YAI+PCED+++ V+GLSEDILV+ + ++++ERYSS VK+F + S T + +W ++GT TAK GEQ+F+L +PV+ARYLKF+F +H+G E YCTL+Q+KVHGSTML+ F +WQ S E +
Sbjct: 176 YANKSSGALILEKSPTMKGSSNLLNDDMDRYAIAPCEDKKYVVVGLSEDILVKQVFLANYERYSSHVKEFTIFGSTTMLMGDWAEVGTFTAKPRNGEQSFDLTEPVWARYLKFRFTTHYGSEHYCTLSQIKVHGSTMLQGFHEQWQASEEETED 329
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A7S1D9Q2_CYCTE (Hypothetical protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q2_CYCTE) HSP 1 Score: 180 bits (457), Expect = 1.710e-48 Identity = 96/190 (50.53%), Postives = 132/190 (69.47%), Query Frame = 1
Query: 37 DDEEDGNGRAASPRQHTLQNYASRESGATMLESSAGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEWQQSSAE--VREMQDMMKKDSKASVG 600
+DE+DG P + +YAS +GA +LE S KG +NLL+ +KDKYAISPCE++++ V+GLSEDILV+ + ++++ERYSS VKDFQ+L S T + +W++LGT TA G+Q F+L QP +ARYLKF+FLSH+G E YCT++Q+ VHGST L+ F EWQ S E V E ++ DSK G
Sbjct: 206 EDEDDG------PSEIVTVDYASTTAGALILEKSPHMKGTSNLLNGNKDKYAISPCEEKKFVVIGLSEDILVKQVCLANYERYSSRVKDFQILGSQT--MGKWVNLGTYTADPNNGQQKFDLGQPSWARYLKFRFLSHYGSEHYCTISQIMVHGSTQLQGFHEEWQDSKDEKAVPEESGAVQPDSKEQGG 387
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A7S4IV93_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IV93_9STRA) HSP 1 Score: 180 bits (457), Expect = 1.950e-48 Identity = 84/153 (54.90%), Postives = 113/153 (73.86%), Query Frame = 1
Query: 73 PRQHTLQNYASRESGATMLESSAGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEW 531
P + + +YA++ SGA +LE S KG +NLL D D+YAI+PCEDR++ V+GLSEDILV+ IK+S++ERYSS ++FQVL S T +W DLGT A GEQ+FEL +P +ARYLKF+ L+H+G E YCT+TQ+KVHGSTM + F +W
Sbjct: 126 PTERLVVDYANKNSGAIILEKSPSMKGTSNLLKSDNDQYAIAPCEDRKFVVVGLSEDILVKQIKLSNYERYSSHPREFQVLGSQTNTGSDWADLGTFIADPGNGEQSFELDEPAWARYLKFRLLTHYGAEHYCTVTQIKVHGSTMTQGFHEQW 278
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A7S3GXC2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXC2_9STRA) HSP 1 Score: 168 bits (426), Expect = 2.610e-47 Identity = 87/188 (46.28%), Postives = 131/188 (69.68%), Query Frame = 1
Query: 4 ASTRSMVPDNEDDEEDGNGRAASPRQHTLQNYASRESGATMLESS-AGSKGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQ-PVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLENFQHEWQQSSAEVREM 561
A + ++ ++DD+++ N +A R + N+AS+ +GA +L+ S A +KG LL+DDKDKY ISPCE+++W V+GLSEDIL+ +I++S++E+YSS +KDFQ+LAS +YP EW++LG TAK G Q F + RYLK KFL+H+ E CTL+Q+KV G T++ +FQ E Q+S +R+M
Sbjct: 21 AQSNDLIVKDKDDDDEANTKAK--RAVKMFNFASQSAGAVILDKSPASAKGFHYLLNDDKDKYGISPCEEKKWVVIGLSEDILITSIEVSNYEKYSSTLKDFQLLASYSYPTDEWINLGQYTAKPQLGAQLFNVTDNEAHTRYLKVKFLTHYSDEALCTLSQIKVFGVTVIASFQQEVQRSDTNMRDM 206
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A482SF98_9ARCH (SUN domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SF98_9ARCH) HSP 1 Score: 161 bits (407), Expect = 7.490e-46 Identity = 84/166 (50.60%), Postives = 117/166 (70.48%), Query Frame = 1
Query: 22 VPDNEDDEEDGNGRAASPRQHTLQNYASRESGATMLESSAGS-KGMANLLDDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQ--PVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTML 510
V D E D + N R++ L N+AS +GA +L+SS S KG NLL+ DKDKY+ISPC ++RW V+GLSEDI + ++ ++++ERYSSLVKDFQ+LAS +YP EW+DLGT TA+ GEQTF + Q + RYL+ +F +H+ E CTL+Q+KVHG T++
Sbjct: 31 VDDEEVDATNSNSRSSG----NLFNFASATAGAVVLDSSPSSAKGYYNLLNSDKDKYSISPCSEKRWVVIGLSEDIQITSVVLANYERYSSLVKDFQLLASGSYPTSEWIDLGTYTAEPKLGEQTFNITQLSTGYTRYLRVRFQTHYLDEALCTLSQIKVHGLTII 192
BLAST of mRNA_F-serratus_M_contig130.2230.1 vs. uniprot
Match: A0A7S1TP62_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP62_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.060e-45 Identity = 76/142 (53.52%), Postives = 108/142 (76.06%), Query Frame = 1
Query: 94 NYASRESGATMLESSAGSKGMANLLDDDKDKYAISPCE-DRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLASPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFYCTLTQVKVHGSTMLEN 516
NYAS+E+GA L SS KG + LL+ ++DKYAI PC + RW V+GLSEDI+V++ +++ E+YSS+ + ++LA+ TYP ++W DLG A+ V+GEQTFE+ +ARYLK +FLSHHG E+YCTL++VKVHG T++EN
Sbjct: 44 NYASKEAGALSLGSSPALKGASALLEKNQDKYAIVPCTAEERWVVIGLSEDIMVKSFSMANFEQYSSMFHEVRLLAATTYPTEKWADLGVYAAEFVRGEQTFEVPGGAWARYLKLEFLSHHGVEYYCTLSEVKVHGETLVEN 185
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 283.9 |
| Seed ortholog evalue | 6.7e-74 |
| Seed eggNOG ortholog | 2880.D8LTA6 |
| Preferred name | SUCO |
| KEGG ko | ko:K01528 |
| KEGG Pathway | ko04072,ko04144,ko04721,ko04961,ko05100,map04072,map04144,map04721,map04961,map05100 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000278,GO:0000281,GO:0000910,GO:0003674,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005773,GO:0005783,GO:0005789,GO:0005791,GO:0005886,GO:0006457,GO:0006996,GO:0006997,GO:0007049,GO:0007154,GO:0007267,GO:0008150,GO:0009889,GO:0009891,GO:0009893,GO:0009987,GO:0010712,GO:0010714,GO:0012505,GO:0016020,GO:0016021,GO:0016043,GO:0019222,GO:0022402,GO:0023052,GO:0030154,GO:0030176,GO:0030278,GO:0030587,GO:0031154,GO:0031224,GO:0031225,GO:0031226,GO:0031227,GO:0031967,GO:0031975,GO:0031984,GO:0032502,GO:0032965,GO:0032967,GO:0034103,GO:0034975,GO:0042175,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043621,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0045165,GO:0045168,GO:0045595,GO:0045597,GO:0045667,GO:0045669,GO:0045778,GO:0046331,GO:0046658,GO:0046850,GO:0048518,GO:0048522,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051239,GO:0051240,GO:0051301,GO:0051703,GO:0051704,GO:0061640,GO:0065007,GO:0071840,GO:0071944,GO:0090702,GO:0098827,GO:0099120,GO:1903047 |
| EggNOG free text desc. | positive regulation of collagen biosynthetic process |
| EggNOG OGs | KOG1396@1,KOG1396@2759 |
| EC | 3.6.5.5 |
| COG Functional cat. | O |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01000,ko04131,ko04147 |
| Exons | 3 |
| Model size | 705 |
| Cds size | 687 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929252.3859296-CDS-F-serratus_M_contig130:110023..110306 | 1622929252.3859296-CDS-F-serratus_M_contig130:110023..110306 | Fucus serratus male | CDS | F-serratus_M_contig130 110024..110306 - |
| 1690962769.6202774-CDS-F-serratus_M_contig130:110023..110306 | 1690962769.6202774-CDS-F-serratus_M_contig130:110023..110306 | Fucus serratus male | CDS | F-serratus_M_contig130 110024..110306 - |
| 1622929252.4338815-CDS-F-serratus_M_contig130:111307..111420 | 1622929252.4338815-CDS-F-serratus_M_contig130:111307..111420 | Fucus serratus male | CDS | F-serratus_M_contig130 111308..111420 - |
| 1690962769.6326506-CDS-F-serratus_M_contig130:111307..111420 | 1690962769.6326506-CDS-F-serratus_M_contig130:111307..111420 | Fucus serratus male | CDS | F-serratus_M_contig130 111308..111420 - |
| 1622929252.4478562-CDS-F-serratus_M_contig130:120200..120491 | 1622929252.4478562-CDS-F-serratus_M_contig130:120200..120491 | Fucus serratus male | CDS | F-serratus_M_contig130 120201..120491 - |
| 1690962769.640878-CDS-F-serratus_M_contig130:120200..120491 | 1690962769.640878-CDS-F-serratus_M_contig130:120200..120491 | Fucus serratus male | CDS | F-serratus_M_contig130 120201..120491 - |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
| 1622929252.4628682-UTR-F-serratus_M_contig130:120491..120509 | 1622929252.4628682-UTR-F-serratus_M_contig130:120491..120509 | Fucus serratus male | UTR | F-serratus_M_contig130 120492..120509 - |
| 1690962769.648737-UTR-F-serratus_M_contig130:120491..120509 | 1690962769.648737-UTR-F-serratus_M_contig130:120491..120509 | Fucus serratus male | UTR | F-serratus_M_contig130 120492..120509 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig130.2230.1 >prot_F-serratus_M_contig130.2230.1 ID=prot_F-serratus_M_contig130.2230.1|Name=mRNA_F-serratus_M_contig130.2230.1|organism=Fucus serratus male|type=polypeptide|length=229bp
MVPDNEDDEEDGNGRAASPRQHTLQNYASRESGATMLESSAGSKGMANLL DDDKDKYAISPCEDRRWAVLGLSEDILVRTIKISSHERYSSLVKDFQVLA SPTYPVKEWLDLGTLTAKSVQGEQTFELAQPVFARYLKFKFLSHHGGEFY CTLTQVKVHGSTMLENFQHEWQQSSAEVREMQDMMKKDSKASVGASSVGI NDSISSGGGGGSNANKGASMPTPGGSPRS back to topmRNA from alignment at F-serratus_M_contig130:110024..120509- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_F-serratus_M_contig130.2230.1 ID=mRNA_F-serratus_M_contig130.2230.1|Name=mRNA_F-serratus_M_contig130.2230.1|organism=Fucus serratus male|type=mRNA|length=10486bp|location=Sequence derived from alignment at F-serratus_M_contig130:110024..120509- (Fucus serratus male) GCCGCCTCGACGCGATCGATGGTACCGGATAACGAGGACGACGAGGAAGA
TGGGAACGGCAGAGCGGCTTCCCCCCGCCAGCATACCCTGCAAAACTACG
CCAGTCGAGAATCCGGCGCAACGATGCTCGAGAGTTCGGCAGGATCTAAA
GGAATGGCCAACCTTCTGGACGATGACAAGGATAAATACGCCATTTCCCC
GTGCGAAGACAGACGGTGGGCCGTGCTGGGGCTTTCGGAGGACATCCTCG
TCCGGACAATCAAAATCAGCAGCCACGAGAGATACTCTTCCTTGGTGAAG
GATTTCCAGGTGGGGTGAAGGACGCGGGTGGTCGAACTGCAGGTATACAA
CAGTAGGACTACCATGTTGGATGTTGTACCAGACTACATTGTTTCTGCGT
AGCGATCAATGTATGTGTACATCAGTGTAGTACAACGGCGGGCTTCTCTC
CGACATTATACTCTGTTGACCCAATAATATGTTACTTACCATCGGGGAAC
CCGTTGAAATGCTCAGAAGGTCTAGGCGGCGTTCAGATTTTCTTTTAAAC
GGTAGAGTTTTCCCCCTTCGTGAACAACAGCACAACATTATGAACGTCTG
TTGTGCATGTGTAGTAAGTAAAGCGAAGGAGAGCCAACATGCATCGCGTC
AGCACCGTCCGTTCCAACTGACTCGATCTGTTAACTGCATGTTGACGTTT
CTGTCGTTGAAATCCATATAATAATGAGTGAGGTCGTCCACCGCCTGTTA
TGTTGGTTGACAGAGTCCGCGGGCTTTTTGTCATCGTATCCACGGACGTA
AGCAAAACACGTTGAAATACACCACCACACCACCGCCAGTAGTTGTGACT
CGTGAACGAGTCTCTGAGCCTTGGTGATCGAGCAGTACCCTCCATGATAT
GAGCAGTAATAACCCAACCAAATATCGCGTGGTGCTTGTGAGGAAAAGTC
TGAACGCATCTACCGTAAGCCTCCCGAGCATCCGCACCGTCGAGGGGAAA
TTGCGTCGAAACTTTAATTTAGGTGGGAACACTAGACGGTACTGATGTAA
TACATAGTTCCGATCAGAGTTTACTCTGTGTTGCTCTTATAAATAACACA
AAAAAAACTGATACGTACCTGGTACCTAACTACTGTACCGTGCTTGTACG
CAGTTAGTCTGTTGGTGGATTTTTTTTTTAATCGAGAATTTAGAGAAAGT
TGTCTCGTGATTAGAATTTCGATTATTCCCGAAAAAAAGCTACCAGGTAT
TTCCTCATACTATTTCATATAAATGCAAATACCGAAACGTTTTGACTTTT
TGCAAAAGGGAATATTCCGCGCCCGAGTTCCGTCGCGACATTTCCACGAA
AAAGGCCACGAAATTCGTCCCCGTCTGTTGTGTCTCCAAAAAATTCGGAG
GAACTCGCCAGCCCACCCTTGAAACCATAACCATCCATAAAACGCCCAGT
AGAGCTTACGCTTTAGGTCGTAAAATGGTCTGCAGTCAGAAATCACTGAG
AAATAGAAACTTCTTTGAAAATGCAGGGCATGTCTCCTTTTCTTTTTATC
AGCAGAGACACAGACAAAACCATGCAAAACCAGCCCACAGGGTACGTCGA
TCAAGCGGCCAGCCATTTACTGGGACCACGCGGTCAGCTGGGGTGGGGGG
GGTTGGGTTAGCGTTAGCGATATTGGTCGGGTTGGCAAAAAATAGCGATA
TTGGCTCGATTTTGGTCGGGTTGGTGTAGCGCCGCATTCCTATATATTCT
CGGAAGATTCCTATATATTTCCTGTTACGACCTAAAGCGTAAGCTCGCCT
CAAAACGCCTGCAAAATACAGTTGAACGTTTGGGATTTTCGGGTGAGGGT
TCTCGGGCGTTAAGTTATCATACATCCGTGGTACATGTTCTCCGAAATTT
CCTAACCCAAACCCCCACGAAATCCCCGCGGAAAGGCTATTTTCAGTGTA
GTGTAAAAAACGGTGGAAATAAGAAGGATTTCCGTCGGGAAGTTTCCAGC
CACGGAAATCGGCCAAGGAATTTCCTCTTTGCAAACACCCTAATTAATGT
GTCAGTACTGTTTAAAGAAAAATCTGAACGCATCTAGACCTTCTGAACAA
TATTATACCCCAGTCAAGGGGAAAAACTGTTGTACAGTGTATACATACAC
ACTTCATGCCATTAGTCTAGTGGGTGTGGAAAAGAGGGGCGCATGCTAAT
TGGCCCATGGTGTCCAGCAAAGGCAGCACCCGATTGAAACTACCTTGAGC
TTTACTAACCGTTATTCTTAATGTTTTTCTCGTGTCCCTGCATGGCGATT
AATGTGAATGTACAGTATAACGGTGGGCTTCTCCCCGACATTATACTGTT
GACTCAGTGTTACTTGCATCGGGGAACCTGTTTAAATACCATGAAGAGAT
TTTGTATTTTCAGCCTTTGATCCCACCTGAACGTTTTGACATTTTTCCCC
TCTAACCGGGGGATGCTCAAAAGGTCTAGGTGCTGTTCTGATTTTCTTTA
AACCCTGTGCCGGCGGACTCTCGGCAATGAACGCCATCGATACGCAATTG
CGTGACCCGATGGCGTATGGCGGTTTCAATAAAAAAATGGATGCCGCCGC
GTGGAGAAAAATCAGAACGCGCTTATACCTTCTGATCAATAGCATCCTCC
GGTCAGGAGAAAAAAATGCCAAAACGTTTAGGTGGGATCATAGGCTGCAA
TTGTTGTTTCACACTGTCGCCGTTACTTTCAACATGCCCACTTCATACCA
ATAGTGGGTGTGGGAAAGAGAGGCGTATATTAATTGGTCCATAGTGACTT
GCTAAGGCAGCAGTCGTTCGGAACTACCTTGAGATTTACTGGCCCTGTGC
CGACGGACTCTCGGCAGTGAACGCCATCGGTACGCAATATTGCGTGACCC
GATAAACTTGGGACTTACCCGATGGCGTATGGCGGTTTAATATAAATATA
TGGACGCCGCCGCGGAACTCGGGAGGAATCCCGTAAGTAAGCACCAGATT
CAGCCTGAGTATGGAGATGAGCAGGCTGACGCGGGACGGGACTGCCGAAA
CCGTCTCGCGAGACCAAATTCTCAGGCGCGAACGCGGACAGGGGAATATT
CTTTTTCCTTGTTCAGCTGACCACAAGCAGGATTGGCAACCTTACCAGGT
TGATCCATACTCTTGCTATATGTGTGACCATACACATTCAGCGTATTGGT
TGCCAACCCGAAAAAACCACTTTATTACACGGTGGCCAATCCCGCTCGTG
GGCTGCTGAACAAGGAAAAAAGTAAAAGTCTGGCAGCGCACCCCCTCCCC
CACCCCAATCCCCCCACGCTGCTCGCTCGGAGAAAAAAAGTCACGCGACG
CATCTACATGTCTAGGTGCTATGCAGGTCGGCGTTACGCAGGTCCCGGTC
CGTCTCGCGTCCGTACAAATATTTCTTCGACTCGTCGGCTACGCCAATGG
GTGTCGCTTCGCAAAATTCTCGTTGTCTCTCTCTTCTCCTGGCGACCTCT
GGCCACTTCTACCTCTTCTTTTCTCAACGCGGCCATGAACCTTTGCCCAC
CCTCCGTAACCGCCTCAACCCACACCTCAGCCTTTCACGCCATCGCTTTC
CAGTCCCCCGTTATGCCAAACACCCAGATGTCGCTCTGTACGCAATCAGT
CCACTCGTTTTCCTTCCCACCCCGTCCTCTCCGCACTGCACCCTCAAGGT
TTCAGAACATGACTAGCTTTGGCAGCCGCCCGCCGCTCATTCGGATGAGC
ATCCCCGCCCACAAAAGTCTTCTCGTGCGCAAGGTTGTCTCGATACTCTC
GCACCGGATTATCTCAAGGGCACGAGGTCATCCGGTGGTCTGGTCTCGTA
AGTCGGGAGGAATCCCGCGAGAAAGCACCAGATTCAGCTTGAGTATGGAG
AGACCAATTTCTCAGGCGCGAACGGGGACAGGGAAATATTTATTGTTTTC
GTTCAGCTGACCTCGAGCAGGATTGGCAACCTTACCAGGTTGATCCTTAC
TCTTGCTGTATGTGATGAGACTATGACCATAGATACACAAATACAGGTAG
GCATTGTCTCCCTGTACGCCTTTTTTTCAGGAGGGAGGCGTTGCTTTGAT
ACAAAAAAATTGCAGCTTTGGGAAAAAAGTTCTCCTTTGAAAATATTTTC
GAATAGTTTAGTAATATTGATTATTTGCGAATAGTCCCTACCATAAAACA
CGCCAAGTGATTGATTCACAACCCTCCTTCACGATACTGTCAACATGCCC
ACTTCATACCATTAATAGTATAGTGAGTGTGGGAACAGAGAGGCGCACAT
TAATTGGTCCATGGTGACGCAAAGGTAGCACCCGTTGCTGGTACTGCCTT
GAGGACTACTGGCGCTGTGCCGGCGTACTCTCGGCAGTGAACGCCATCGG
TACGCACTTGCGTGACCCGATGAACTCGGGACTAACCCGACGTCGTATGG
CGGTTAAGATAAATAAATGGACGCCGCCGCGGAAATCGGGAGAGATCCCG
CGAGTAAGCACCAGATTCAGTCTGCTTATGGAGAAAAAGCAGGCTGACGC
GGGACAGGACGGGGCCCAACCCGTCTCGCGAGACGAAATTCTTAGGCGCG
AACGGGGACAGGAAAATATTATTTTTCCCTGCTCAACTGACCACGAGCAG
GATTGGCAACCTTATCCGGTTGATCCAAACTCTGCTATGTGTGATGACTA
TATTACATTCATATATCATCTCTTCTCCGGAAATTTGGAATTTAAGAATT
TGCATCGTTGGGGAAAAAGTTCTCATTTGAATTATTTTCGAATATTAAAA
TCAAGTATTTGCGAATGGTTGGTGCCTTTCCATGACGCGCCAAGTGATTG
ATTGATTCACAACCTTCCTACCTGGTACAGTTTACAGTTTGATCTTCTAT
AGTTAGTTATTATTCCTGGAAGACAGTCTATATAGTCTACAGCACTATAA
TACCGGTAGTCAGTATCATCTCGCTAAAAAAACGCAAAAAAGTGTCATCC
CGGGAGGGAGAATGGAATGCATAGGGTGCTCGGATTCCGATCCTTTCACG
TGTGTGACTGACTATACATACATGCTATTAATACATGTTTTACTCCGTCA
GGTTCAAGTTTTGCATCGGTCCTCTGCATACATCCAAAAAAACTACTGTA
AGAGGGTTAGGTTATTTAAGCCTTGTCGGAGTATAGCAGGTACCGAAGCG
ACCTTGCCCCGTTTTCTGTAAAGTGGACGACTGTTGGGTGAGCTAGAGAG
TGCTATTAATAGTTTATAGCGATACAACTCTACCCCGTGCCGTGCACCAC
GCGGGACTAGTCCTCCTGTTGTCCCAAAAAACTTCGCCTGTGAAGATGAG
CTCACAGGTGAATCTAACTTCAACAACTCAGTCTACATGCATTCAGACTT
TTCTTAATAAGCGCCTCATCGAGATGGTGCCGGGCAGGAATTCACCACGT
CATACAGCACACACACGATGTTTGTTTGGCTAAATACATACTGGTACTAG
GTAAGAAATAGGTGTGGTGGTACTATCTATTAAATTACTGTGACGTAAAA
AAAGGAAATGGCTATTTGGCCCATCGGTGGGCCATTCCCAATTTTACCCC
ACCACCTGGATCTCGCGAATGCTCACCCGCCGATAGGTTACTCTGCACTT
GACGGGGGGAAAAAAAACGAAGACCCGCCTTTAGCGACTGATTGTCAACT
CCTACTTCGTACTTTTAATTAAATACTCCAGTACTGGTATGGCTTACTAA
ATAACTATGGTTATTACAGCAATATGTTCAACACTTCGTCGTAAAGTACT
TTAGCGTTATCATTTCACTTCGCAGACAGAATGCATGCTGTGATATCGAA
CCCGGAGCCTTCCACGCGATGAACTAACTCATTGATTGCTCATTGATTGC
TCACGCCAAGCAAGATCAGGTTCCAGATTTCAGATCCCGGAGCTTGAGAC
CTTTGGTACATAGCCTTGGATGACGGGCATCGATCACATTTACGCCACCC
ATGCTCGTGGTAACAACTCGAAAAATTCCTCGTTTCCGCTGTAAAAAACG
TCAAAAAGCACAGAAAATACAGTATGCCACTTGAGATCGAATAAAATAAC
GGTTACAGACAGTTTCAGTATGTATTGTCATCACACATCACGTATAGCTG
AGTATGGACCAATCGGGTAAGGTTGCAAATTCTGCTCGTGGTCAGCTGAT
CAGGAAAAATAACATTTCCCTGTCCCCATTCGCGCCTGAGAGTTTGGCCT
CGCGGGAAGGGTTCGGCCGTCCCGTCCCGCGTCAGCCTGCTTATTCTCCA
CACTCAGGCTGAAGCTGGTGCTTACTCACGGAATTTCTACCGATTTCCGC
GGCGGCGTCCATTTTTTATACCACCAACCGTCATCGAGTCAGTACCGAGT
TTATCGGTTCACGCAATTGCGTACCGAAGGCATTTACTGCCGAGAGTCCG
CCGGCATAGGGCCAGTAGTTCTCAAGGTAGTTCTAGTGACGAGTGCTGCA
ATTGCAGGTATCACCATGGACCAATATATATGCGCCTCGCTATACTATTA
TTGGTATGAAGTGGTTATATTAATAGTCATATCATGTGCGATACAGAAAG
TATCGGAGACGAAACAGTAATACAGTATTAATAGTATGCTATCGAACGAA
TGTGGGGCATATCGGAACAACGCCTAGCCAGCTCCCGAACATCGACGTCT
TCATACCCCACCAGTTATTCCAGTAAACTTGTGTAAAGGAGATGGTTGAT
ACAGTTCTACTGACATCACACTTCATTTCATTGGCAAGGAGCCCCCTTGA
CATGAGACATTAAAAGCTAACCTCCAAGACATTAAAAACTAACCTCCAAG
AATCGGCCTCCGATGAAATGCGAGTGCAAGAAGTGACTTGTATCATACCA
GTAGTCTCTCTCTCTCAATATATAGACTATATGTATGTATGTATAGTCAC
ACATTTAGCAAGTGTATGGATCAATCGGGTAAGGTTGCCAATCCTGCTCG
TGGTCAGCTGAACAGGGAAAATGAGCATTTTTTCCCGCGTTCGCGCCTGA
GAATTTGGTCTCGCGAGACGGGTTCGGCAGTCCCGTCCCGCGTCAGCCTG
CTCATCTCCATACTCAGGTTGAACCTGGTGCTTACTTACGGGATTCCTCC
CGAGTTCCGCGGCGGCGTCCATTTCTTTATTTCAAACCGCCATACGCCAT
CGGGTCAGTCCCAAGTTTATCGGGCCACGCAATTGCGTACCGATAGCGTT
CACTGCCGAGAGTCCGCCGGCACAGGGCCAGTAGTCCTCAAGGTAGTTCC
GAACGAGTGCTGCCTTGGCAGGTCACCATGGACCAATTAATATGTGCCTC
TCTTTCCCACATCCACTATTGGTACGAAGTGGTATGCCCGGGTGGTTCAG
TTGGTAACCTCGAAACCTTCTGACCTTGTTGGGACGTGAGTTCGAATCTC
GGCGAGTGACACGAACTGGTGTTTTCTCTCACATCATGCCCAACAAGTGG
AGAAAGATTATATCGTGGGTACTGTACACAAAATACAACTTCACGTTTGA
CGAGGGAAAGGGATGGCGAAATCCTTCTCGCGATAAAAAATAAGCCAAGC
CCCGCGGAAGAAAAGTGGAGAAAGGAAGAAAAAGAACAAGAAAAACTTAT
GTGTGGCCTTCCTCCTGTGTGACCCCGGCTGGTGCGTCCTGCCTATATAT
TATACCGAAAGATGTAGTCTGACGTCCAGAATAAATGGGATGACAACAAA
CAAACAAAGCAAAAACAAAAAGTGTACCACCCATGATGAAAACTCCGCAC
CAAGGAGCCTTGGAATGGTTTCGATATTTTTGCCGAATATTGAACATTCC
AACATTCCGTACTGCACTCTATCTATAGTTCTGACGTGGAGCAAATGGAA
CCACGTCTGCATCGGGTGCACGGAGTTCCCCACGATTGTAATATGTTTTG
TGGCGTGTGGCGACCGTTATCGATGGGGTGACTTGCTTGGTCACAAAACC
CGTCTTTGTCTTAAGGAGCCTTGGAATGATTTCGATATTTTTACCGAATA
TTGAACATTCTAACATTCCGTACTGCACTCTATAGTTCTGACGTGGAGTA
TATGGAACCACCTCTGCATCGGGTGCACGGAGTTCCCCACGATTGTAATC
CGTTTTGTGGTGTGTGGCGACTACTATGGATGGGGGCGACTTGCTTGGTC
ACAAAAACCGTCCTTGTCCTCTCGTTTGGAGGGGGCTGGCTGTCTTGCGT
GGGCACCGCGACGACATTATATCCCCGTGCACAAAAACTCAGCACAATCT
GTCACCGAGCACAACAGTGCTTTTCCCTTGGAGCTCTAAAATGATATTCT
TACGGTAGCATTAACAATACAGACTACAGTAGTATGGCTCTTATAAAAAT
ATGTACAAGAAATGGGGGCGAGGAGCGCCGCATAGTTTGGAGTATTAAAT
GGTGTGCCTATTCAGATCGTACAATACTTCTTTTAGACCTTATTCATAGT
ATAATAGTCGCTTGCAGTTCGACAGGGGAGATCTAGCTCTACAATTGATG
GAAATAGATATATATATATATATATACCACAGATTGAACCTCAAAGTATA
GTTTTTGTATAGACCGTAGAGAGTGTGGCACTGTACTATTACTATAATAT
TAATATTGGACCCCGAAAAGAGGACGACTCCTTGTCATCAGGGGATTGGT
TTACTGGCTCAGGTTGTGCGGCGGAGGAAGCCGTTCCGCTTCGTCCTGGC
CAGCTGTAACGCGCTTCGCCGCCCGGGACTTGTCAGAGCTTGGCCTAGTC
ACGAGCCGGTCAACCTTTTCATTTCCTATGTATATATGTTTCCCTCTTCC
TTTCGTTTTCCTATCATCGTTGCCATTCCCAATGCTTCTCTTCTCGATAA
CGCCCCCCGCAGGATAGTAGCTCTGCGCCTTGACAGTGCACGCACCATAA
GTTTTTTTTCATCTGTTGTTTTTATCCGAAAACGTTCGAACCAGGTTTGC
TTCTGTAGGATACATTACACTTTTTGCGATTCCTTTGTGATTCTTGACCG
ATTTCTTTACCGGTTACTCGTGCGCCAACATCAAATCAGGTTCTCGCGAG
CCCGACGTACCCAGTGAAGGAGTGGCTGGATCTTGGTACCTTAACGGCGA
AGTCAGTTCAAGGAGAACAGACGTTCGAGCTGGCCCAGCCTGTTTTCGCG
AGGTGACCGTAAACGCGTTACCTTTGCTTCCCTGGGGATATCTTGGCTTC
CGACCGGCAGGCGCTCGCGCAAGGTTGTACGTTTAGCAGCGTTTGGAAAG
GCAACGAAAAATATTTATAATGCATTTGTTCTGCACATGGAACAGGCGAG
CGCCTTGACCCCTTCCGGGGCCGAGGCCGAAACATCATCGATAGACGTTC
TCGAGGCGCCTGTCAGTACCGCGATAAATATATGCGAAATAGGCAGTTAC
CTCTTTGGGGGCAAGATCTGGAGGGAAAAGCAGGGGGAGACCTAGCGGGT
CGGCCTTGTAAGGCGCCCAGCTTGGTCGAAAGGAGCTTATGCGTCCTCCT
CGCAGATTCCGCACGTGATGGTTCTCGTAAAAATCAGTTCCACGGTACAC
ATTTTCCCCCCTGCGCCAACGACCCAGGCTTGGGTGAATCCGGTCAGCCG
CGCCGTGTGAGCGTTTGAAAAAGCATCAAGAGTTAATAGCCGTGTTGGGT
GATGTAATGTAATGTAATGTATTGAATTGAATGTGCCAGAAACCAACACC
GAACTTCTCTAGTGGTATCACGGGTTCAATACATATGAACGGAAATGCAC
TGCATAGCACAGAGCAATATTTTTTACTGCTATCTCTTCATATTCGAGAT
CTCTTCGAATCTCAAAGTTTGTGATGTATGAAGATTTTTTTCGCGAAAGT
CGAAGAGTTCGTGTTTTCTTCTGAAGCTCCTCCTTGAGCATTCCGCCAGT
GTTTTCTTCCAAATCTCCTCATGAAGCAAGCACTCCGTCAGTGCTTTCTC
CTTACCCCGTAAAAACTTGTCTTCTCAAGCGGCTGCTTGATCTTTAGCCG
AAACCCCCTTGAGGTTACCCTTTTTCTTAACTAGGCATTCGTAGGCACGC
GCATGATTAGAACTCGACCGGGCGAGCACGGGCCCTGACGCAAACGTAAC
CGCTGTGGTCCTCTTTCCCCCGTGTTCTCTCTCGATTTATTCCTCCCCCC
CAGATACCTCAAGTTCAAGTTCCTGTCTCACCATGGGGGTGAGTTCTACT
GCACTTTGACGCAGGTGAAGGTACACGGCTCTACGATGCTGGAGAACTTC
CAACACGAGTGGCAGCAGAGCTCCGCCGAGGTGAGGGAGATGCAAGATAT
GATGAAAAAAGATTCCAAGGCCTCGGTGGGGGCGAGCAGCGTCGGCATCA
ACGACAGCATCAGCAGTGGAGGCGGCGGCGGTTCCAACGCGAATAAAGGT
GCCTCGATGCCCACCCCAGGCGGCTCCCCTCGCTCT back to topCoding sequence (CDS) from alignment at F-serratus_M_contig130:110024..120509- >mRNA_F-serratus_M_contig130.2230.1 ID=mRNA_F-serratus_M_contig130.2230.1|Name=mRNA_F-serratus_M_contig130.2230.1|organism=Fucus serratus male|type=CDS|length=1374bp|location=Sequence derived from alignment at F-serratus_M_contig130:110024..120509- (Fucus serratus male) ATGGTACCGGATAACGAGGACGACGAGGAAGATGGGAACGGCAGAGCGGC TTCCCCCCGCCAGCATACCCTGCAAAACTACGCCAGTCGAGAATCCGGCG CAACGATGCTCGAGAGTTCGGCAGGATCTAAAGGAATGGCCAACCTTCTG GACGATGACAAGGATAAATACGCCATTTCCCCGTGCGAAGACAGACGGTG GGCCGTGCTGGGGCTTTCGGAGGACATCCTCGTCCGGACAATCAAAATCA GCAGCCACGAGAGATACTCTTCCTTGGTGAAGGATTTCCAGATGGTACCG GATAACGAGGACGACGAGGAAGATGGGAACGGCAGAGCGGCTTCCCCCCG CCAGCATACCCTGCAAAACTACGCCAGTCGAGAATCCGGCGCAACGATGC TCGAGAGTTCGGCAGGATCTAAAGGAATGGCCAACCTTCTGGACGATGAC AAGGATAAATACGCCATTTCCCCGTGCGAAGACAGACGGTGGGCCGTGCT GGGGCTTTCGGAGGACATCCTCGTCCGGACAATCAAAATCAGCAGCCACG AGAGATACTCTTCCTTGGTGAAGGATTTCCAGGTTCTCGCGAGCCCGACG TACCCAGTGAAGGAGTGGCTGGATCTTGGTACCTTAACGGCGAAGTCAGT TCAAGGAGAACAGACGTTCGAGCTGGCCCAGCCTGTTTTCGCGAGGTTCT CGCGAGCCCGACGTACCCAGTGAAGGAGTGGCTGGATCTTGGTACCTTAA CGGCGAAGTCAGTTCAAGGAGAACAGACGTTCGAGCTGGCCCAGCCTGTT TTCGCGAGATACCTCAAGTTCAAGTTCCTGTCTCACCATGGGGGTGAGTT CTACTGCACTTTGACGCAGGTGAAGGTACACGGCTCTACGATGCTGGAGA ACTTCCAACACGAGTGGCAGCAGAGCTCCGCCGAGGTGAGGGAGATGCAA GATATGATGAAAAAAGATTCCAAGGCCTCGGTGGGGGCGAGCAGCGTCGG CATCAACGACAGCATCAGCAGTGGAGGCGGCGGCGGTTCCAACGCGAATA AAGGTGCCTCGATGCCCACCCCAGGCGGCTCCCCTCGCTCTATACCTCAA GTTCAAGTTCCTGTCTCACCATGGGGGTGAGTTCTACTGCACTTTGACGC AGGTGAAGGTACACGGCTCTACGATGCTGGAGAACTTCCAACACGAGTGG CAGCAGAGCTCCGCCGAGGTGAGGGAGATGCAAGATATGATGAAAAAAGA TTCCAAGGCCTCGGTGGGGGCGAGCAGCGTCGGCATCAACGACAGCATCA GCAGTGGAGGCGGCGGCGGTTCCAACGCGAATAAAGGTGCCTCGATGCCC ACCCCAGGCGGCTCCCCTCGCTCT back to top
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