mRNA_F-serratus_M_contig130.2226.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig130.2226.1
Unique NamemRNA_F-serratus_M_contig130.2226.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: D8LTA0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA0_ECTSI)

HSP 1 Score: 524 bits (1350), Expect = 1.870e-181
Identity = 262/301 (87.04%), Postives = 274/301 (91.03%), Query Frame = 3
Query:  225 MQIFVEKLGGGHLCLDISS--NDSVSALKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDESNAVPPGR 1121
            MQIFV+ LGGGH  +D+SS  +  VS L+S VE L+GVP  LQRLT+G +DL   +  L DYGIE G TVRL LRL GGIDFQHREGSKFGGGGVMSE QAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAI VQTRNVIKIGRPGYKVTKARDL++NQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDK YQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDE+NA PPGR
Sbjct:    1 MQIFVQGLGGGHFAVDVSSLRDYRVSTLRSAVEGLSGVPPHLQRLTSGARDLASPSASLDDYGIEHGCTVRLSLRLLGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAITVQTRNVIKIGRPGYKVTKARDLSSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDEANAAPPGR 301          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: A0A835YVT4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVT4_9STRA)

HSP 1 Score: 423 bits (1088), Expect = 2.750e-141
Identity = 206/288 (71.53%), Postives = 240/288 (83.33%), Query Frame = 3
Query:  225 MQIFVEKLGGGHLCLDISSNDSVSALKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYF 1088
            M++F + L    + LD+ S+D   A ++ +E   G+P  LQRL+ G +DL  E  CL   G+  GST+ LCLRLRGG+D Q+R GSKFGGGGVMSESQA +DRRERLRKLA ET+DLNKDPYFM+NHLGKYECKLCLTLHNNEGNYLAHTQGKRHQ NLARRAAMEAKNA++KP P  +VQTRNVIKIGRPGYKVTK+RD+ T QRSLLFEVDYPEA+DG QPRHRFMS+YEQKVEAP  +YQYLLFAC+PYET+ FKVPN+ ID+ EGR FTNW+++ KKFTLQLYF
Sbjct:    1 MRLFCKGLDSRIIALDVPSSDMREA-RACLEESTGIPASLQRLSDGRRDLPGEG-CLQSLGVSDGSTLHLCLRLRGGMDMQNRAGSKFGGGGVMSESQANIDRRERLRKLALETIDLNKDPYFMKNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQTNLARRAAMEAKNAVIKPAPITVVQTRNVIKIGRPGYKVTKSRDVHTRQRSLLFEVDYPEADDGVQPRHRFMSSYEQKVEAPSNDYQYLLFACEPYETVAFKVPNVPIDRSEGRLFTNWDRDGKKFTLQLYF 286          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: A0A6H5JLB9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLB9_9PHAE)

HSP 1 Score: 385 bits (988), Expect = 9.820e-128
Identity = 200/245 (81.63%), Postives = 211/245 (86.12%), Query Frame = 3
Query:  225 MQIFVEKLGGGHLCLDISS--NDSVSALKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQ 953
            MQIFV+ LGGGH  +D+SS  +  VS L+S VE L+GVP+ LQRLT+G KDL   +  L DYGIE G TVRL LRL GGIDFQHREGSKFGGGGVMSE QAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNAL          TRNVIKIGRPGYKVTKARDL++NQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDK YQ
Sbjct:    1 MQIFVQGLGGGHFAVDVSSLRDYRVSTLRSAVEGLSGVPSHLQRLTSGAKDLASPSASLDDYGIEHGCTVRLSLRLLGGIDFQHREGSKFGGGGVMSEGQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNAL----------TRNVIKIGRPGYKVTKARDLSSNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKGYQ 235          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: A0A7S3XZJ6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XZJ6_HETAK)

HSP 1 Score: 369 bits (948), Expect = 1.530e-120
Identity = 192/308 (62.34%), Postives = 227/308 (73.70%), Query Frame = 3
Query:  195 TTNYRSTT*QMQIFVEKLGGGHLCLDISSNDSVSALKSTVEALAGVPTQLQRLTTGGK-DLHCEARCLSDYGIETGSTVRLCLR--LRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDESNAV 1109
            T  +  T+ +MQIF+  L G     ++   +SV    S V    G+      L + G+  L  +   +S  G+  GS + L  R  L+GGIDFQHREG KFGGGG MS    A++RRERLRKLA ET+DL KDPYFMRNHLG YECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAA+EA++A +KPQ A +V TR  IKIGRPGYKVTK+RD+ T QRSLLFEVD PE E+GAQPRHRFMSAYEQKVEAPDK YQYLL AC+PYET+ FK+PN  +DK EGRFFTNW+   KKFTLQLYF +++  +
Sbjct:    7 TKFFGGTSRRMQIFLRGLNGISRVWNVEDGESVRRFCSRVALEEGISDGDVILASSGRLILGKDDTPISALGLGFGSALSLFPRGGLKGGIDFQHREGIKFGGGGAMSSQNEAIERRERLRKLAMETLDLAKDPYFMRNHLGTYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAALEARDAPIKPQAARVVPTRRTIKIGRPGYKVTKSRDVETKQRSLLFEVDCPEVEEGAQPRHRFMSAYEQKVEAPDKAYQYLLVACEPYETVAFKIPNQPLDKGEGRFFTNWDANNKKFTLQLYFREDAATM 314          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: A0A7S2B1N4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1N4_9STRA)

HSP 1 Score: 369 bits (946), Expect = 1.700e-120
Identity = 185/278 (66.55%), Postives = 217/278 (78.06%), Query Frame = 3
Query:  300 LKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALV-KPQPA--IMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDESN--AVPPG 1118
            L+  +    G+P     L   G+ L  + R + DY +  GST+ + LR+RGGIDFQHREGSKFGGGGVMSE+QA  DRRERLRKLA ET+DL KDPYF++NHLG +ECKLCLTLHN EGNYLAHTQGKRHQQNLARRAA E +  L  KP  A   +   R+ IKIGRPGYKVTK+RD  T QRSLLFEVDYPEAE+G QPRHRFMSAYEQ+VEAPDKNYQYLLFAC+PYET+ FK+PN  IDK EGRFFT+W+ E+K+F+ QL+F+D S+  A P G
Sbjct:    2 LREALSEREGIPACEMCLMANGRQLSEDFRRVEDYSLGHGSTISILLRVRGGIDFQHREGSKFGGGGVMSETQANADRRERLRKLALETIDLEKDPYFLKNHLGTFECKLCLTLHNTEGNYLAHTQGKRHQQNLARRAAREEQLGLAAKPNTAKAALAAGRSSIKIGRPGYKVTKSRDAATKQRSLLFEVDYPEAEEGVQPRHRFMSAYEQRVEAPDKNYQYLLFACEPYETVAFKIPNHPIDKGEGRFFTSWDGESKQFSAQLFFQDPSSVKAAPQG 279          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: A0A4D9D479_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D479_9STRA)

HSP 1 Score: 365 bits (936), Expect = 6.060e-117
Identity = 189/309 (61.17%), Postives = 227/309 (73.46%), Query Frame = 3
Query:  183 QTEGTTNYRSTT*QMQIFVEKLGGGHLCLDISSNDSVSALKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAP-DKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDESNA 1106
            Q      Y+S       F   L  G    + SSN+  SA+ +  E L G+P  LQRLT GG+ L  + + L+D  I    T+ L L L GGIDFQHR+GS+FGGGG MSES A  DRRERLRKLA ET+DLNKDPYFMRNHLG YECKLCLTLHNNEGNYLAHTQGKRHQ+NLARRAA EAK    +P    MV  R ++KIGRPGYKVTKARDL+T QRSL+FE+DYP+AE+  QPRHRFMSA+EQ+VE+  ++ +QYLLFAC+PYETIGFK+PN++IDK EGRF + W+ +A+KF LQLYF +    
Sbjct:   39 QVRSAQAYKSDVRDSSTFRPSLRLGTRNRNASSNNG-SAVDNK-ECLGGIPAALQRLTLGGRHLR-DDQTLADCVINGCETLHLVLPLPGGIDFQHRDGSRFGGGGQMSESLANADRRERLRKLALETIDLNKDPYFMRNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQENLARRAAREAKEQQYRPNKPTMVAARRMMKIGRPGYKVTKARDLSTRQRSLIFEIDYPQAEEDVQPRHRFMSAFEQRVESTKEREWQYLLFACEPYETIGFKIPNVEIDKGEGRFLSQWDPKARKFLLQLYFRERGEG 344          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: A0A1W0A306_9STRA (Splicing factor 3A subunit n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A306_9STRA)

HSP 1 Score: 346 bits (888), Expect = 8.380e-112
Identity = 174/294 (59.18%), Postives = 213/294 (72.45%), Query Frame = 3
Query:  225 MQIFVEKLGGGHLCLDISSNDSVSALKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAK--NALVKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDES 1100
            M +FV  +G   + + +   DSV+ LK  V  L G+P  L  L      L  +A  LSDYGI  GST+   + L+GG+DFQ+R G+KFGGGGVMSE QA +DRRERLRKLA ETVDL+KDPY ++NHLG +ECKLCLTLH+NEGNYLAHTQGKRHQ NLARRAA +A   +A V P   + V     IKIG PGYKVTK RD  T  R LLF++ YP+  DG QPRHRFMSA+EQ+VE  DKN+QYLLFAC+PYETI FK+PNL++DK +G+F+TNW+K  K FTL + F  E+
Sbjct:    1 MDVFVRGIGSKEIHVIVQETDSVNGLKYQVSKLMGIPASLFNLAFNAHQL-IDANYLSDYGIVHGSTLNALMSLKGGMDFQNRVGTKFGGGGVMSEQQANIDRRERLRKLALETVDLSKDPYILKNHLGTFECKLCLTLHSNEGNYLAHTQGKRHQTNLARRAAKDAAEASASVPPPQKLDVPKIRTIKIGLPGYKVTKQRDPDTGARMLLFQIFYPDIMDGYQPRHRFMSAFEQRVEVADKNFQYLLFACEPYETIAFKIPNLEVDKSDGKFYTNWDKSGKSFTLHVAFVPEN 293          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: A0A067CHK6_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHK6_SAPPC)

HSP 1 Score: 337 bits (864), Expect = 4.990e-108
Identity = 175/296 (59.12%), Postives = 211/296 (71.28%), Query Frame = 3
Query:  225 MQIFVEKLGGGHLCLDISSNDSVSALKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQ--PAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDESNA 1106
            M +FV  LG   L +   + DS++A+K+ V  L GVP  L +L+   + L  E   + DY I  GST+   + L+GG+DFQ+R GSK G GGV SE QA +DRRERLRKLA ETVDL+KDPY ++NHLG +ECKLCLTLH+NEGNYLAHTQGKRHQ NLARRAA +A  A    Q  P   +Q    IKIG PGYKVTK RD  T  R LLF++ YP+  DG QPRHRFMSA+EQ+VE  DKN+QYLLFAC+PYETI FKVPNL +DK EG+FFTNW+K  K FTL + F  E+ A
Sbjct:    1 MDLFVRGLGPKELHVVAQATDSIAAVKAHVSGLMGVPVALFKLSFNAR-LLVETNFVHDYCITHGSTLAASMALKGGMDFQNRVGSKPGSGGVASEQQANIDRRERLRKLALETVDLSKDPYILKNHLGTFECKLCLTLHSNEGNYLAHTQGKRHQTNLARRAAKDAAEASANVQAPPKPEIQRIRTIKIGLPGYKVTKQRDPDTGARMLLFQIFYPDVMDGLQPRHRFMSAFEQRVEVADKNFQYLLFACEPYETIAFKVPNLDVDKSEGKFFTNWDKLGKSFTLHVTFMPEAPA 295          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: K3XBD3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3XBD3_GLOUD)

HSP 1 Score: 333 bits (855), Expect = 1.720e-106
Identity = 178/319 (55.80%), Postives = 210/319 (65.83%), Query Frame = 3
Query:  225 MQIFVEKLGGGHLCLDISSNDSVSALKSTVEALAGVPTQLQRLTTGGKDLHCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNAL----------VKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYF---EDESNAVPPGR*PRPQGR 1142
            M +FV         +  +   SV   K  V+    VP +  +L      L  +   LSDY I+ G+++ + L LRGGIDFQ+R GSK G GGV SESQ+ +DRRERLRKLA ETVDL KDPYFM+NHLG YECKLCLTLHNNEGNYLAHTQGKRHQ NLARRAA EA +A                         +KIG PGYKVTK RD  T  R LLF++ YP+ +   QPRHRFMSA+EQK+EAPDKN+QYLLFAC+PYET+ FK+PNL+IDK EG+FF+NW+K  K FTLQLYF    DE    P    PRPQ R
Sbjct:    1 MDVFVRAPNNLLHTIRCAGQQSVLEFKHAVQDATRVPLEAMKLRFATSLLADDGAMLSDYKIQHGASISIHLSLRGGIDFQNRAGSKPGAGGVASESQSNIDRRERLRKLALETVDLAKDPYFMKNHLGSYECKLCLTLHNNEGNYLAHTQGKRHQTNLARRAAKEASDAAHXXXXXXXXXXXXXXXXXXARPRALKIGLPGYKVTKQRDPDTGARILLFQIAYPDHDPKLQPRHRFMSAFEQKIEAPDKNFQYLLFACEPYETVAFKIPNLEIDKSEGKFFSNWDKNGKTFTLQLYFAVDSDEKKDQPAPPPPRPQLR 319          
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Match: F0YC33_AURAN (Matrin-type domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YC33_AURAN)

HSP 1 Score: 327 bits (837), Expect = 5.010e-105
Identity = 158/216 (73.15%), Postives = 177/216 (81.94%), Query Frame = 3
Query:  465 QHREGSKFGGGGVMSESQAAVDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHTQGKRHQQNLARRAAMEAKNALVKPQPAIMVQTRNVIKIGRPGYKVTKARDLTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACDPYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDESNAVP 1112
            Q R  S+ GGGGV S  QA VDRRERLRKLA ETVDLNKDPYFMRNHLG YECKLCLTLHN EGNYLAHTQGKRHQQNLARRA  EA++A + P     V+ R+ IKIGRPGYKVTK+RD  T+QR LLFEVDYPEA+D +QPRHRFMSAYEQ+VE PDK YQYLLFAC+PYETIGFK+PN  +DK +GRFFTNW+   KKFTL L F+D++   P
Sbjct:    4 QDRVNSRHGGGGVQSSEQANVDRRERLRKLALETVDLNKDPYFMRNHLGTYECKLCLTLHNTEGNYLAHTQGKRHQQNLARRAFKEARDAPIAPAATRYVEKRHTIKIGRPGYKVTKSRDAATSQRCLLFEVDYPEADDASQPRHRFMSAYEQRVEPPDKAYQYLLFACEPYETIGFKIPNHDVDKDQGRFFTNWDVVGKKFTLSLQFDDDAKPAP 219          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2226.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTA0_ECTSI1.870e-18187.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A835YVT4_9STRA2.750e-14171.53Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JLB9_9PHAE9.820e-12881.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S3XZJ6_HETAK1.530e-12062.34Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2B1N4_9STRA1.700e-12066.55Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A4D9D479_9STRA6.060e-11761.17Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A1W0A306_9STRA8.380e-11259.18Splicing factor 3A subunit n=1 Tax=Thraustotheca c... [more]
A0A067CHK6_SAPPC4.990e-10859.12Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
K3XBD3_GLOUD1.720e-10655.80Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
F0YC33_AURAN5.010e-10573.15Matrin-type domain-containing protein n=1 Tax=Aure... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:86918..91246 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score528.1
Seed ortholog evalue2.7e-147
Seed eggNOG ortholog2880.D8LTA0
Preferred namesap62
KEGG koko:K12826
KEGG Pathwayko03040,map03040
KEGG ModuleM00352
Hectar predicted targeting categoryother localisation
GOsGO:0000245,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005684,GO:0005686,GO:0006139,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0007275,GO:0007399,GO:0008150,GO:0008152,GO:0008380,GO:0009987,GO:0010467,GO:0010720,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016071,GO:0016604,GO:0016607,GO:0022008,GO:0022607,GO:0022613,GO:0022618,GO:0030154,GO:0030532,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032991,GO:0034622,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0046483,GO:0048518,GO:0048522,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051239,GO:0051240,GO:0051960,GO:0051962,GO:0060284,GO:0065003,GO:0065007,GO:0070013,GO:0071004,GO:0071010,GO:0071013,GO:0071704,GO:0071826,GO:0071840,GO:0090304,GO:0097159,GO:0097525,GO:0120035,GO:0120114,GO:1901360,GO:1901363,GO:1902494,GO:1990904,GO:2000026
EggNOG free text desc.spliceosomal complex assembly
EggNOG OGsCOG5246@1,KOG0227@2759
Ec32 ortholog descriptionUbiquitin-like
Ec32 orthologEc-12_005780.1
COG Functional cat.A
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03041
Exons4
Model size1905
Cds size900
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2226.1prot_F-serratus_M_contig130.2226.1Fucus serratus malepolypeptideF-serratus_M_contig130 87142..90465 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929251.9823983-UTR-F-serratus_M_contig130:86917..871411622929251.9823983-UTR-F-serratus_M_contig130:86917..87141Fucus serratus maleUTRF-serratus_M_contig130 86918..87141 +
1690962769.4562483-UTR-F-serratus_M_contig130:86917..871411690962769.4562483-UTR-F-serratus_M_contig130:86917..87141Fucus serratus maleUTRF-serratus_M_contig130 86918..87141 +
1622929252.0794153-UTR-F-serratus_M_contig130:90465..912461622929252.0794153-UTR-F-serratus_M_contig130:90465..91246Fucus serratus maleUTRF-serratus_M_contig130 90466..91246 +
1690962769.5166016-UTR-F-serratus_M_contig130:90465..912461690962769.5166016-UTR-F-serratus_M_contig130:90465..91246Fucus serratus maleUTRF-serratus_M_contig130 90466..91246 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929252.0029197-CDS-F-serratus_M_contig130:87141..876681622929252.0029197-CDS-F-serratus_M_contig130:87141..87668Fucus serratus maleCDSF-serratus_M_contig130 87142..87668 +
1690962769.4690638-CDS-F-serratus_M_contig130:87141..876681690962769.4690638-CDS-F-serratus_M_contig130:87141..87668Fucus serratus maleCDSF-serratus_M_contig130 87142..87668 +
1622929252.024381-CDS-F-serratus_M_contig130:89411..896131622929252.024381-CDS-F-serratus_M_contig130:89411..89613Fucus serratus maleCDSF-serratus_M_contig130 89412..89613 +
1690962769.4789448-CDS-F-serratus_M_contig130:89411..896131690962769.4789448-CDS-F-serratus_M_contig130:89411..89613Fucus serratus maleCDSF-serratus_M_contig130 89412..89613 +
1622929252.0456247-CDS-F-serratus_M_contig130:89841..899611622929252.0456247-CDS-F-serratus_M_contig130:89841..89961Fucus serratus maleCDSF-serratus_M_contig130 89842..89961 +
1690962769.4937408-CDS-F-serratus_M_contig130:89841..899611690962769.4937408-CDS-F-serratus_M_contig130:89841..89961Fucus serratus maleCDSF-serratus_M_contig130 89842..89961 +
1622929252.0586407-CDS-F-serratus_M_contig130:90414..904651622929252.0586407-CDS-F-serratus_M_contig130:90414..90465Fucus serratus maleCDSF-serratus_M_contig130 90415..90465 +
1690962769.505266-CDS-F-serratus_M_contig130:90414..904651690962769.505266-CDS-F-serratus_M_contig130:90414..90465Fucus serratus maleCDSF-serratus_M_contig130 90415..90465 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig130.2226.1

>prot_F-serratus_M_contig130.2226.1 ID=prot_F-serratus_M_contig130.2226.1|Name=mRNA_F-serratus_M_contig130.2226.1|organism=Fucus serratus male|type=polypeptide|length=300bp
MQIFVEKLGGGHLCLDISSNDSVSALKSTVEALAGVPTQLQRLTTGGKDL
HCEARCLSDYGIETGSTVRLCLRLRGGIDFQHREGSKFGGGGVMSESQAA
VDRRERLRKLAQETVDLNKDPYFMRNHLGKYECKLCLTLHNNEGNYLAHT
QGKRHQQNLARRAAMEAKNALVKPQPAIMVQTRNVIKIGRPGYKVTKARD
LTTNQRSLLFEVDYPEAEDGAQPRHRFMSAYEQKVEAPDKNYQYLLFACD
PYETIGFKVPNLKIDKQEGRFFTNWEKEAKKFTLQLYFEDESNAVPPGR*
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mRNA from alignment at F-serratus_M_contig130:86918..91246+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig130.2226.1 ID=mRNA_F-serratus_M_contig130.2226.1|Name=mRNA_F-serratus_M_contig130.2226.1|organism=Fucus serratus male|type=mRNA|length=4329bp|location=Sequence derived from alignment at F-serratus_M_contig130:86918..91246+ (Fucus serratus male)
CCCACCCATCCCGTGCATTTTTCAATTTTTTGGCCCTCGGCTCTTGAACG CAGGAAGTCATCTCGCTTGCCCATCAAGGACCTCGCAGAGGTTAACGGTT GAGGGACTGCGTGCCGTGGATTCTACCTTGATATAATTTTCCCGAAATTG TTGGAGAAGGCTCCACTCAATCCGAAACCTCACAAACCGAAGGCACTACT AACTATCGGAGTACTACGTAACAAATGCAGATCTTCGTCGAAAAGTTAGG CGGAGGCCACCTCTGCTTGGACATCTCCAGCAATGATTCAGTCTCAGCCT TAAAATCGACAGTGGAAGCGCTAGCAGGGGTTCCGACACAACTCCAGCGT TTGACAACGGGCGGAAAGGACCTTCATTGTGAGGCACGATGTCTGAGCGA CTACGGGATCGAGACGGGAAGCACCGTCAGGCTGTGCTTGCGCCTACGCG GAGGTATCGACTTTCAACACCGAGAGGGGTCGAAGTTCGGTGGTGGTGGG GTGATGTCCGAGTCCCAGGCAGCCGTTGACAGGAGGGAAAGGTTGCGGAA GCTGGCGCAAGAGACGGTGGATCTGAATAAGGACCCGTATTTCATGAGGA ATCACCTTGGCAAATACGAGTGCAAGCTCTGTCTAACGCTTCACAACAAT GAGGGCAACTACCTGGCCCATACTCAAGGGAAGCGGCATCAGCAAAACCT GGCTCGGAGGGCAGCGATGGAGGCGAAGAACGCTCTGGTCAAGCCACAAC CGTAAGTGCCGCCATGTTGCTCTCAGAGTATGTCAAGAGATATTTTCATT GTTACCAGCTATCAGCGGGCGCAGTGGAGAGTTTGCAAGAATGCCAAGGG GGGGCGTTTTCTTCCGTTGCTTAACTAAACTATAATCTTAATATAATAGC CGGAGAGGATAAGTTGTTAATAACAGCTATGTATGAAATAACAGCCGTGG ACGTGGTAGAGATACATACAGAGTACCAGGTACAACATATGCAGTTTTCT GTCACGTCGCTACCTCCACCATGAACTTGTAGATTTTTCAAAAGCGATCC TGTTACGTACCGCAGAAGGCTGTGACGATACTGCATGAAAATCCGCCACC TCTTTCACCCCCGGTAACCAACTGCTGTTTGAAATTCAGCTGATGGCTTA CGGTCTTCTCGTGCAAGGCCGGGAAATGATGACAGGATCATGGCTTGCAG TCGACGATTTTAGACGCCCCACTAATATAATAGTTGTCGCCTCCGTTTAT CGCGCAGTATTTTCCCGACTGGGGGATGCTCAGAAGATCGAGATGCGTTC AGATTTTCTGTAAATACATTTTCTTTAAATACAGCAGTACTGCTGTAGGT TTCCCCGCAGATCATTTCTTGCCTGGAGAAACCCTTTCATGTTTTTTTTT TAATGTTCTCGTCATGTGCGTGTGTGATGAGATTACTATTACACCACAGG GTAAAAGTCATTTGACAAATAATTACCACTCGGTAATCAGTCTTGATAAC ACTCTCCACCCGCAGAATTTGACTATCCGGTAATCAAGCGGACTAGTTAA TTCGATAAAGTTTTGAGTGTAGGAGCATAGTCCCTTTCTTTTTCATACGT AAGAGTACAAATACCGTATATATTTTCATCTCCAACCGATATTCTGCCCA GGAATCCGGTGAGGTAAAGAAGCTAGCTCAGCGGGATTCGAATCCGGGTC CTACCGTCGACGCCAGTGTGATAAGGTTACGGTTACTATTACACCACAGG GTAAAAGTCAATTGACAATTAATTACCACTCGGTAATCAGTCTTTACAAC ACTCTTATCAAATCAAGTAGTCCGCTTGATCACCGGATAGTCAAATTATG TTGGTGGAGAGTGTGATAAGGTTACTATTACACCACAGGGTAAAAGTCAA TTGACAATTAATTACCACTCGGTAATCAGTCTTGACAACACTCCACCCGC AGAATTTGACTATCTGGTGATCAAGCGGACTAGTTGATTCGATAAATTTT TGAGTGTAGGAGCATAGTCCCTTTCTTTTTCATACGTAGAGTACAAATAC CGTATATACTTTCATCTCCAACCGATATTCTGCCCAGGAATCCGGTAAGG TAAAGAAGCTAGCTCAGCGAGATTCGAACCCGGGTCCTACCGTCGACGCC AGTGTGATAAGGTCACTAATACACCACAGGGTAAAAGTCAATTGACAATT AGTTACCACTCGGTAATCAGTCTTTATAGCACTCTTATCGAATGAAGTAG TCCGCTTAATCACCAGATAGTCAAATTCTGCGGGTGGAGAGGGTGATAAG GTTACTAATACACCACAGGGTAAAAGTCATTTGACAATTAATTACCACTC GGTAATCAGTCTCTATAACACGTGCTTACAGAATTTTTCGAATGCATTTC ATCAAACCTTTCAGAGAGCATCCACACCCGTCCATGGGAATTTCCTCCCT AACCGACTTTCCCCTTGTCGCGTATCCTACAACAAACATGCCAGAGCCAT CATGGTTCAAACGCGGAACGTCATCAAGATCGGCCGGCCCGGTTACAAGG TCACAAAAGCGAGAGATCTCACTACCAATCAGCGCAGCCTCCTGTTCGAA GTGGACTACCCCGAAGCGGAGGACGGTGCCCAGCCGCGTCACCGCTTCAT GTCTGCGTACGAGCAGAAGGTGGAAGCACCAGACAAGAACTATCAGGTAT CATTGCCGTACCGGGGGCGCGCCCTTCGATGACCCTCTCGCGGCGCAGCT CCGACGCTAGAGTCGATATGATTTTGTTGTTAGTATGGTATGGATTACTT ATCAGAGCTCGGCTCCTTGTCAGGGATGCGGTTCCCCGAGTGCGTTATAG TGCCCCGTTCCAGTGAGCGCTGACAATGTCCTTGGTACCGATGCTCTCTA TTTACCGTACGTTTTCATGCGCAGTATCTGCTATTCGCGTGCGACCCTTA TGAGACGATCGGATTCAAAGTCCCCAACCTTAAGATTGACAAGCAGGAGG GGCGATTCTTCACTAACTGGGAGAAGGAAGCTAAAAAGTTCACGGTGAGA GGTAGATCGAACGGGTCACACGCAAGCACTACCACCGGCGCGCAGCGTGT CCGCGCTCACGTATGCGCGGCGCACGTGCTACTTGTGCGCGTTCACGTGC ACATGGACACTTCGATGCCCCATGCCCGAGGCATGCGTTAACCTCAATCC TACAGAGAAGCTGTGTTTCTTGCTGGCGTGAGGCTTTATTATTGTAGATA CAACACATCGTTGTCTCACTATTCGTCTGGACAGCGAAAGGTTATCGCGC TTTTCTCGTAATATATCTGCATCCACGTCTAGACTAGTCCGACCCTAGGA GCGCTCTTTATGCTGAGATTTACCCTCGTGGCCTAGGTGCAAAAGAAGCG AGGCAAGACCGGAATGATTTCAATTTGCCAGCGCGCCGTGTAATATTTGT GTTAACCCATCCAAGTATTTTCTCCTCCTTGCGTCTTCCCGCTGCAGCTC CAGCTGTACTTCGAGGACGAATCGAACGCCGTACCACCCGGACGCTGACC GAGGCCTCAGGGGCGCTAATAATAGGTTCCACGGAAAAGCGCAGGCTCAA TCTGAAAGCACACACGTATTGAAGTGTTGCAAGTACTGCGCTCGCTTGGA AGACTTTACCATACCACTGCGTAAGGCGATGTTTCTTCCTTTTTGCAAAA CGGCAGTTCTGGGCCCCTCTGGTCACAAGCTCTACCGCTTGCCTTGGGTG CTCGCCCTCGCATAGGGGTCGAGCCAGGGTGCCGTGACCGAACACTGGCC ACAAATATGGACCTCGCGGGTCACCATTAGGGTGGGGTTAGGTCCACTGT GCCCACCTGGGACCACACAAAAAAAAAGTAGCGCCAACCGAGTTCGAATC CGAGGCGGAAATAGTCATTATTTGCCTTCCCTTGTCCGTTATCCCCATCA CTACCTCCGTGTCAGTTTGCCTTATGATACTGTAATTGCCGGAAACTTCT TCATTGGGAAGAAACATGTTTCTATGAAGTGGTGCAAATGCCATAAAGAG GTTTTGTCTTCGCAGCCTATGATTCCACCTAAACGTTTTGATATTTTCCG CCCTGACTGGGGGATGCTCAGAAGGTCTATATGCGTTCAGATTTTTGTCT GAAGTACCTTCCGCGTGGGGCAGCTCGGGTAAGAAAAATTCTGAACGCAG CTTTTTCGACACCTCTAGTTTTTGTTCCCGAGTTTTCCGCAAGCGGTAAT CTACAAAATATGTCGTGGGCTATACCCCCCGTAGTTGTTTTTCCGTGCTC AGTTTCTTTCGCTTTTGCCCGACAGCCCG
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Coding sequence (CDS) from alignment at F-serratus_M_contig130:86918..91246+

>mRNA_F-serratus_M_contig130.2226.1 ID=mRNA_F-serratus_M_contig130.2226.1|Name=mRNA_F-serratus_M_contig130.2226.1|organism=Fucus serratus male|type=CDS|length=1800bp|location=Sequence derived from alignment at F-serratus_M_contig130:86918..91246+ (Fucus serratus male)
ATGCAGATCTTCGTCGAAAAGTTAGGCGGAGGCCACCTCTGCTTGGACAT
CTCCAGCAATGATTCAGTCTCAGCCTTAAAATCGACAGTGGAAGCGCTAG
CAGGGGTTCCGACACAACTCCAGCGTTTGACAACGGGCGGAAAGGACCTT
CATTGTGAGGCACGATGTCTGAGCGACTACGGGATCGAGACGGGAAGCAC
CGTCAGGCTGTGCTTGCGCCTACGCGGAGGTATCGACTTTCAACACCGAG
AGGGGTCGAAGTTCGGTGGTGGTGGGGTGATGTCCGAGTCCCAGGCAGCC
GTTGACAGGAGGGAAAGGTTGCGGAAGCTGGCGCAAGAGACGGTGGATCT
GAATAAGGACCCGTATTTCATGAGGAATCACCTTGGCAAATACGAGTGCA
AGCTCTGTCTAACGCTTCACAACAATGAGGGCAACTACCTGGCCCATACT
CAAGGGAAGCGGCATCAGCAAAACCTGGCTCGGAGGGCAGCGATGGAGGC
GAAGAACGCTCTGGTCAAGCCACAACCATGCAGATCTTCGTCGAAAAGTT
AGGCGGAGGCCACCTCTGCTTGGACATCTCCAGCAATGATTCAGTCTCAG
CCTTAAAATCGACAGTGGAAGCGCTAGCAGGGGTTCCGACACAACTCCAG
CGTTTGACAACGGGCGGAAAGGACCTTCATTGTGAGGCACGATGTCTGAG
CGACTACGGGATCGAGACGGGAAGCACCGTCAGGCTGTGCTTGCGCCTAC
GCGGAGGTATCGACTTTCAACACCGAGAGGGGTCGAAGTTCGGTGGTGGT
GGGGTGATGTCCGAGTCCCAGGCAGCCGTTGACAGGAGGGAAAGGTTGCG
GAAGCTGGCGCAAGAGACGGTGGATCTGAATAAGGACCCGTATTTCATGA
GGAATCACCTTGGCAAATACGAGTGCAAGCTCTGTCTAACGCTTCACAAC
AATGAGGGCAACTACCTGGCCCATACTCAAGGGAAGCGGCATCAGCAAAA
CCTGGCTCGGAGGGCAGCGATGGAGGCGAAGAACGCTCTGGTCAAGCCAC
AACCAGCCATCATGGTTCAAACGCGGAACGTCATCAAGATCGGCCGGCCC
GGTTACAAGGTCACAAAAGCGAGAGATCTCACTACCAATCAGCGCAGCCT
CCTGTTCGAAGTGGACTACCCCGAAGCGGAGGACGGTGCCCAGCCGCGTC
ACCGCTTCATGTCTGCGTACGAGCAGAAGGTGGAAGCACCAGACAAGAAC
TATCAGAGCCATCATGGTTCAAACGCGGAACGTCATCAAGATCGGCCGGC
CCGGTTACAAGGTCACAAAAGCGAGAGATCTCACTACCAATCAGCGCAGC
CTCCTGTTCGAAGTGGACTACCCCGAAGCGGAGGACGGTGCCCAGCCGCG
TCACCGCTTCATGTCTGCGTACGAGCAGAAGGTGGAAGCACCAGACAAGA
ACTATCAGTATCTGCTATTCGCGTGCGACCCTTATGAGACGATCGGATTC
AAAGTCCCCAACCTTAAGATTGACAAGCAGGAGGGGCGATTCTTCACTAA
CTGGGAGAAGGAAGCTAAAAAGTTCACGTATCTGCTATTCGCGTGCGACC
CTTATGAGACGATCGGATTCAAAGTCCCCAACCTTAAGATTGACAAGCAG
GAGGGGCGATTCTTCACTAACTGGGAGAAGGAAGCTAAAAAGTTCACGCT
CCAGCTGTACTTCGAGGACGAATCGAACGCCGTACCACCCGGACGCTGAC
TCCAGCTGTACTTCGAGGACGAATCGAACGCCGTACCACCCGGACGCTGA
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