mRNA_F-serratus_M_contig130.2224.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig130.2224.1
Unique NamemRNA_F-serratus_M_contig130.2224.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126WZN1_9PHAE (Putative LOV domain-containing protein n=1 Tax=Dictyopteris undulata TaxID=156997 RepID=A0A126WZN1_9PHAE)

HSP 1 Score: 409 bits (1051), Expect = 2.680e-141
Identity = 216/242 (89.26%), Postives = 230/242 (95.04%), Query Frame = 1
Query:   34 DDKERVVRRSAGGMAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEE 759
            DD E+  +RS GG     RPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR+NL A+EAKELL QT+TS+LI+S+PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDGVMFWNQFFIAALRDSEG VINYVGVQC+VDEDFVRA+QK+EG+E
Sbjct:   33 DDGEKGGKRSGGGXX---RPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRSNLSAEEAKELLEQTETSNLIASNPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGVMFWNQFFIAALRDSEGAVINYVGVQCKVDEDFVRASQKKEGDE 271          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126X2D9_9PHAE (Putative LOV domain-containing protein n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A126X2D9_9PHAE)

HSP 1 Score: 405 bits (1042), Expect = 3.560e-140
Identity = 211/232 (90.95%), Postives = 222/232 (95.69%), Query Frame = 1
Query:   70 GMAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEEGD 765
            G   GKRPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVT+LQEENEKLRGAIR NLGA+EAKELL+QT++SSLI+S PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAALRDSEG VINYVGVQC+VDEDFVRA Q+ EGEE +
Sbjct:   22 GSGTGKRPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTSLQEENEKLRGAIRANLGAEEAKELLAQTESSSLIASKPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGAVINYVGVQCKVDEDFVRAVQRTEGEEAE 253          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126X307_SARHM (Putative LOV domain-containing protein n=1 Tax=Sargassum hemiphyllum TaxID=127544 RepID=A0A126X307_SARHM)

HSP 1 Score: 411 bits (1057), Expect = 7.480e-140
Identity = 215/228 (94.30%), Postives = 223/228 (97.81%), Query Frame = 1
Query:   67 GGMAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKRE 750
            G   GGKRPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR+NLG +EAKELL+QT+TSSLISSSPG+ATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAALRDSEGTVINYVGVQC+VDEDFVRAAQKRE
Sbjct:  192 GRRGGGKRPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRSNLGPEEAKELLTQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGTVINYVGVQCKVDEDFVRAAQKRE 419          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: D8LT99_ECTSI (Aureochrome 3 n=5 Tax=Phaeophyceae TaxID=2870 RepID=D8LT99_ECTSI)

HSP 1 Score: 404 bits (1037), Expect = 1.910e-139
Identity = 216/251 (86.06%), Postives = 231/251 (92.03%), Query Frame = 1
Query:   19 TGLEEDDKERVVRRSAGGMAG---GKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDT-SSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEE 759
            +G++ED         AGG  G   GKRPRQGGRNMTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVT+LQEENEKLRGAIR+NLG +EAKELL++T+T ++LISS PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAALRDSEGTVINYVGVQC+VDEDFVRA Q+ EGEE
Sbjct:    2 SGMDEDXXXXXXXXXAGGKRGSVSGKRPRQGGRNMTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTSLQEENEKLRGAIRSNLGPEEAKELLAETETPTTLISSRPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAALRDSEGTVINYVGVQCKVDEDFVRAVQRTEGEE 252          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A126X1C8_9PHAE (Putative LOV domain-containing protein n=1 Tax=Sargassum horneri TaxID=74089 RepID=A0A126X1C8_9PHAE)

HSP 1 Score: 385 bits (989), Expect = 1.320e-132
Identity = 200/213 (93.90%), Postives = 208/213 (97.65%), Query Frame = 1
Query:  112 MTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKRE 750
            MTE+Q+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR NLG +EAKELL+QT+TSSLISSSPG+ATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+D SVCLRNYRVDG MFWNQFFIAALRDSEG VINYVGVQC+VDEDFVRAAQKRE
Sbjct:    1 MTEKQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGPEEAKELLTQTETSSLISSSPGEATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDASVCLRNYRVDGAMFWNQFFIAALRDSEGIVINYVGVQCKVDEDFVRAAQKRE 213          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: X2CR90_SACJA (Aureochrome2 (Fragment) n=1 Tax=Saccharina japonica TaxID=88149 RepID=X2CR90_SACJA)

HSP 1 Score: 337 bits (863), Expect = 4.220e-114
Identity = 175/184 (95.11%), Postives = 182/184 (98.91%), Query Frame = 1
Query:  112 MTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAAL 663
            MTEQQ+LDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIR NLGADEAKELL+QT++SSLI+S+PGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKG+DTSVCLRNYRVDG MFWNQFFIAAL
Sbjct:    1 MTEQQRLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRANLGADEAKELLAQTESSSLIASNPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGMDTSVCLRNYRVDGAMFWNQFFIAAL 184          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A835YVH1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVH1_9STRA)

HSP 1 Score: 327 bits (839), Expect = 1.480e-107
Identity = 170/220 (77.27%), Postives = 197/220 (89.55%), Query Frame = 1
Query:  100 GGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSS---LISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKRE 750
            G R+M+EQQKL+RRERNREHAKRSRVRKKFLLESLQKSV+ALQEENE+LRGAIR N    +A+ELL++T+      +++++PG+A +VLDDPDYSLV+ALQTAQQNFVITDPTLPDNPIVFASQGFL+LTGYTLDQVLGRNCRFLQGPDTDPKAVE+IRKAIE G DTSVCL NYR DG  FWNQFFIA+LRD++G +INYVGVQC+V E+FV A QK+E
Sbjct:  167 GSRSMSEQQKLERRERNREHAKRSRVRKKFLLESLQKSVSALQEENERLRGAIREN--CTDAQELLTRTEAGGGGGVLAATPGEANRVLDDPDYSLVRALQTAQQNFVITDPTLPDNPIVFASQGFLDLTGYTLDQVLGRNCRFLQGPDTDPKAVERIRKAIESGCDTSVCLLNYRSDGTQFWNQFFIASLRDADGKIINYVGVQCKVSEEFVTAVQKQE 384          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A7S2GCF2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2GCF2_9STRA)

HSP 1 Score: 320 bits (819), Expect = 8.540e-107
Identity = 166/220 (75.45%), Postives = 187/220 (85.00%), Query Frame = 1
Query:  106 RNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDTSS--LISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEE 759
            RNMTE+QK++RRERNREHAKRSRVRKKFLLESLQ+SV ALQ+ENEKLR AI+ +L   +A  LLSQ  T +  LI+S P DAT++LDDPDYSLVKALQTAQQNFVITDP+LPDNPIVFASQGFL LTGY LDQVLGRNCRFLQGP TDPKAVEKIR A+  G+D SVCL NYR+DG  FWNQFF+A LRDS+G V+NYVGVQC+V EDF RA  + EG E
Sbjct:   14 RNMTEKQKVERRERNREHAKRSRVRKKFLLESLQQSVNALQQENEKLRSAIKEHLNPQQADSLLSQCSTKAGPLIASDPNDATRILDDPDYSLVKALQTAQQNFVITDPSLPDNPIVFASQGFLSLTGYQLDQVLGRNCRFLQGPQTDPKAVEKIRNAVADGIDASVCLLNYRIDGSTFWNQFFVAPLRDSDGQVVNYVGVQCKVSEDFARAIAQSEGAE 233          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A7S1CUW3_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1CUW3_CYCTE)

HSP 1 Score: 310 bits (795), Expect = 4.120e-101
Identity = 162/225 (72.00%), Postives = 192/225 (85.33%), Query Frame = 1
Query:  106 RNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELL----SQTDTSSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFV-RAAQKREGEEGD 765
            R M+EQQK++RRERNREHAKRSR+RKKFLLESLQ+SVT L+EENEKLR +IR++LGA EA ELL    S+   + LI++SP DA KVLDDPD+S +KALQTAQQNFV+TDP+LPDNPIV+A+QGFL LTGYTLDQVLGRNCRFLQGP+TDPKAVEKIRK+IE+G D SVCL NYRVDG  FWNQFFIAALRD+ G + NYVGVQC+V + +     +K+E EEG+
Sbjct:  157 RKMSEQQKVERRERNREHAKRSRIRKKFLLESLQQSVTLLKEENEKLRQSIRSHLGAAEADELLGKSLSKAGEAGLIANSPVDANKVLDDPDFSFIKALQTAQQNFVVTDPSLPDNPIVYATQGFLNLTGYTLDQVLGRNCRFLQGPETDPKAVEKIRKSIEEGTDMSVCLLNYRVDGTTFWNQFFIAALRDASGNITNYVGVQCKVSDQYAANVCKKQEAEEGE 381          
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Match: A0A7S1UCA1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCA1_9STRA)

HSP 1 Score: 303 bits (777), Expect = 4.830e-99
Identity = 161/226 (71.24%), Postives = 188/226 (83.19%), Query Frame = 1
Query:  100 GGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTALQEENEKLRGAIRTNLGADEAKELLSQTDT-SSLISSSPGDATKVLDDPDYSLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRFLQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDSEGTVINYVGVQCRVDEDFVRAAQKREGEEGDADG 774
            GGRNMTE+QKL+RRERNREHAKRSRVRKKFLLESLQKSV ALQ EN +LR AIR  +  DEA+++L  T+   SL+++S  +AT++LDDPDYSLVKALQTAQQNFVITDP LPDNPIVFAS GFL LTGYTLDQVLGRNCRFLQGPDTDPKAV KIR+AI  G D SVCL NYR+DG  FWNQFF+AALRD  G + NYVGVQC+V +D+ +  ++ + ++  ADG
Sbjct:  106 GGRNMTEEQKLERRERNREHAKRSRVRKKFLLESLQKSVDALQAENLRLRAAIREQI-PDEAEDVLRATELRDSLLANSAAEATQILDDPDYSLVKALQTAQQNFVITDPNLPDNPIVFASAGFLTLTGYTLDQVLGRNCRFLQGPDTDPKAVAKIREAIADGHDCSVCLLNYRIDGSTFWNQFFVAALRDGRGEIANYVGVQCQVSDDYAKIVRQEDSKKDGADG 330          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2224.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A126WZN1_9PHAE2.680e-14189.26Putative LOV domain-containing protein n=1 Tax=Dic... [more]
A0A126X2D9_9PHAE3.560e-14090.95Putative LOV domain-containing protein n=4 Tax=Scy... [more]
A0A126X307_SARHM7.480e-14094.30Putative LOV domain-containing protein n=1 Tax=Sar... [more]
D8LT99_ECTSI1.910e-13986.06Aureochrome 3 n=5 Tax=Phaeophyceae TaxID=2870 RepI... [more]
A0A126X1C8_9PHAE1.320e-13293.90Putative LOV domain-containing protein n=1 Tax=Sar... [more]
X2CR90_SACJA4.220e-11495.11Aureochrome2 (Fragment) n=1 Tax=Saccharina japonic... [more]
A0A835YVH1_9STRA1.480e-10777.27Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GCF2_9STRA8.540e-10775.45Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S1CUW3_CYCTE4.120e-10172.00Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S1UCA1_9STRA4.830e-9971.24Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:63348..67230 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score402.9
Seed ortholog evalue1.1e-109
Seed eggNOG ortholog2880.D8LT99
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PAS domain
EggNOG OGs2BEDG@1,2S14J@2759
Ec32 ortholog descriptionaureochrome 3
Ec32 orthologEc-12_005760.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size925
Cds size780
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2224.1prot_F-serratus_M_contig130.2224.1Fucus serratus malepolypeptideF-serratus_M_contig130 63421..67158 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929251.195725-UTR-F-serratus_M_contig130:63347..634201622929251.195725-UTR-F-serratus_M_contig130:63347..63420Fucus serratus maleUTRF-serratus_M_contig130 63348..63420 -
1690962769.3541217-UTR-F-serratus_M_contig130:63347..634201690962769.3541217-UTR-F-serratus_M_contig130:63347..63420Fucus serratus maleUTRF-serratus_M_contig130 63348..63420 -
1622929251.3613696-UTR-F-serratus_M_contig130:67158..672301622929251.3613696-UTR-F-serratus_M_contig130:67158..67230Fucus serratus maleUTRF-serratus_M_contig130 67159..67230 -
1690962769.4459138-UTR-F-serratus_M_contig130:67158..672301690962769.4459138-UTR-F-serratus_M_contig130:67158..67230Fucus serratus maleUTRF-serratus_M_contig130 67159..67230 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929251.2164085-CDS-F-serratus_M_contig130:63420..636841622929251.2164085-CDS-F-serratus_M_contig130:63420..63684Fucus serratus maleCDSF-serratus_M_contig130 63421..63684 -
1690962769.3715463-CDS-F-serratus_M_contig130:63420..636841690962769.3715463-CDS-F-serratus_M_contig130:63420..63684Fucus serratus maleCDSF-serratus_M_contig130 63421..63684 -
1622929251.2725596-CDS-F-serratus_M_contig130:64037..640551622929251.2725596-CDS-F-serratus_M_contig130:64037..64055Fucus serratus maleCDSF-serratus_M_contig130 64038..64055 -
1690962769.391808-CDS-F-serratus_M_contig130:64037..640551690962769.391808-CDS-F-serratus_M_contig130:64037..64055Fucus serratus maleCDSF-serratus_M_contig130 64038..64055 -
1622929251.2908175-CDS-F-serratus_M_contig130:64798..648701622929251.2908175-CDS-F-serratus_M_contig130:64798..64870Fucus serratus maleCDSF-serratus_M_contig130 64799..64870 -
1690962769.401295-CDS-F-serratus_M_contig130:64798..648701690962769.401295-CDS-F-serratus_M_contig130:64798..64870Fucus serratus maleCDSF-serratus_M_contig130 64799..64870 -
1622929251.3068655-CDS-F-serratus_M_contig130:65251..653981622929251.3068655-CDS-F-serratus_M_contig130:65251..65398Fucus serratus maleCDSF-serratus_M_contig130 65252..65398 -
1690962769.4107087-CDS-F-serratus_M_contig130:65251..653981690962769.4107087-CDS-F-serratus_M_contig130:65251..65398Fucus serratus maleCDSF-serratus_M_contig130 65252..65398 -
1622929251.3220181-CDS-F-serratus_M_contig130:66101..663121622929251.3220181-CDS-F-serratus_M_contig130:66101..66312Fucus serratus maleCDSF-serratus_M_contig130 66102..66312 -
1690962769.4256575-CDS-F-serratus_M_contig130:66101..663121690962769.4256575-CDS-F-serratus_M_contig130:66101..66312Fucus serratus maleCDSF-serratus_M_contig130 66102..66312 -
1622929251.3413312-CDS-F-serratus_M_contig130:67090..671581622929251.3413312-CDS-F-serratus_M_contig130:67090..67158Fucus serratus maleCDSF-serratus_M_contig130 67091..67158 -
1690962769.4368536-CDS-F-serratus_M_contig130:67090..671581690962769.4368536-CDS-F-serratus_M_contig130:67090..67158Fucus serratus maleCDSF-serratus_M_contig130 67091..67158 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig130.2224.1

>prot_F-serratus_M_contig130.2224.1 ID=prot_F-serratus_M_contig130.2224.1|Name=mRNA_F-serratus_M_contig130.2224.1|organism=Fucus serratus male|type=polypeptide|length=260bp
MAGGKRPRQGGRNMTEQQKLDRRERNREHAKRSRVRKKFLLESLQKSVTA
LQEENEKLRGAIRTNLGADEAKELLSQTDTSSLISSSPGDATKVLDDPDY
SLVKALQTAQQNFVITDPTLPDNPIVFASQGFLELTGYTLDQVLGRNCRF
LQGPDTDPKAVEKIRKAIEKGVDTSVCLRNYRVDGVMFWNQFFIAALRDS
EGTVINYVGVQCRVDEDFVRAAQKREGEEGDADGDEEEDDEEDGDDDRSD
AEDKDAPAC*
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mRNA from alignment at F-serratus_M_contig130:63348..67230-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig130.2224.1 ID=mRNA_F-serratus_M_contig130.2224.1|Name=mRNA_F-serratus_M_contig130.2224.1|organism=Fucus serratus male|type=mRNA|length=3883bp|location=Sequence derived from alignment at F-serratus_M_contig130:63348..67230- (Fucus serratus male)
TCGGCTTCGACGACGTCGACCGGGCTCGAGGAGGACGATAAAGAACGGGT GGTCAGGCGCTCGGCGGGCGGGATGGCGGGGGGGAAGCGACCTCGGCAAG GGGGACGAAACATGACGGAGCAGCAGAAGCTGGATCGGAGGTGCGCATAA TAACACCTTGCTCTGACCGCCGTTACCTGTCGAAGAGGCGATGTTGAGGT TCTCTCTCTCCCCGTGATCACTTGATGGTCGCTTTGGTAAAACTTAGCCC ATGCTGCGCGCCTTTCACCTAATGGAAAGCTTGTGTTGTGCTCAAGGCAG CATGCTACTGTTGTCTCGTCTCGCACATCAAAGAGTGAGTTCTTGACACC TCGTTAGCAGTGCCTGGAAGGTTCCTTGTACAAGTAAAAGTATACCGTAT TATTTTAATATAATAATAATATCAACACGATGCTCGGCGCTCTCTGGCGT GGGGTGGATTTGATTCGCGGCGGTACCCCAACAGAGATTTTGCTGTAGTC TGTGACGAGCGAGTTGCCGACGCTCTGCCTCCCGAGGGCGCGCTATACGT GGTTGGCTTTATACACCCTTTTTCCCGCCTTCTACGTCTCTAGAACCCTA GATCCAGAACCTTCTCGTTCCGTCCGGGACAAGAACAGCGCAACGGTTGT AGTTCTGCCCGTACACGACGTACTTTATCGATCGCCCTGTAGTCCGTCTA CACGATCCGTGGGAGTCGAAAGAGCGGCAACCCCTTCTGGTCCGTGATCG AGAGTGCTACGGCAGGGGTTCGTGAAAACCAACCAAACGTGTAATCTCGT TTTGAGTGACGCATACCGCTTCACCGCGCTGCACTCAACTCAAAATCATG CGTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTACGACACGACACGT ATTGCCGACTCTCCTCAGGGAGCGCAATCGGGAGCATGCGAAGCGGTCGC GGGTGCGCAAGAAGTTCCTGCTAGAGTCGTTGCAGAAGAGCGTGACGGCG CTGCAGGAGGAGAACGAAAAACTGAGAGGCGCCATAAGGACCAACCTTGG CGCGGACGAGGCAAAGGAGCTGCTCTCGCAGACGGACACGTCGAGTCTCA TCAGCAGTTCCCCGGGAGACGCCACGAAGGTGAAGGTCAAACGGAAACGA AAGCAAGGAGTTCCTTGCAGCATCGGAAAACAGGCAAAATAGAGCAAGCG AGCGATCTAGCGTACACCAGAGGAAACGCGGCGTGTCTTTAGCTTTTTAT CGGTTTTTTGCTTGTGATTTGTTGTTGTTGTTTTTCCGGTGGCTTGTCAC ATCCGGCGTGTTGGTGGCCAATCCCGCTCGTGGTCTGCTGCTGAATAGCA AAACATAGATAAAAGAATTTGCCAAAACAAGCGAAAGTTGAATAAAGTAG GATATATATATATGCATATGTTCGGTAAATGAGAACGAGAAATAAGTATA TACAAAAGATATTTAGATAGATTATATATATATATATATACATACGTTGA GAAGCAACATAGAGATAGAACCCGTTGACAAATTTTCATCGAGTCCACAG AATTAGCCGTTCAGAGATACTGTAAAAGAAGTTTAAAAAAAGAAGTGCGC ACAGTAAAGAAAAACAAAATCAACAGCGTTGTGGACGTGAAAAGGGAAAA AATAAAACATATAGATGTATGTATACATATCATAACCAATGCCAACGGGT CCGCACTGCTTTACTAACGAAAGCGCTCCGTGACGAGCTGGCTGTCGCTG CTGCTGTGGACTGCTGTGGACTGCTGTCTTTGGTGGTGATATAAAAATTG AAAACGAAAACGAAAAAATGGCACACGCGCAGGTCCTGGACGATCCCGAC TACTCCTTGGTGAAGGCGTTGCAGACGGCGCAGCAGAACTTCGTCATCAC CGACCCGACTTTGCCCGATAACCCCATCGTCTTCGCCAGCCAAGGCTTCC TAGAGCTTACCGGGTACACCCTCGATCAGGTAGAGAGCAAAAAAAGAAAA GAGAAAAAGGTATCTGGAATTTTATAGAGATGCATTTTTATGTATGGTCG TCACATACATAGCAGAGTATGGATCAATCAGGTAAGGTTGCCAATCCTGC TCGTGGTCAGCTGAACAGGGAAAATGGATATTTCCCTGTCCCCGTTCGCG CCTGAAAATTTGGTATCGCGAGGCTGGTTCAGCGTCCCGTCCCGCGTCAG CCTGCTCATTCTCCATACTCAGGCTGAATCTGGAATGGTATGCATGTAGC ATGTGTGGTCAGCACATTCATGGGCGCTATAGTATTAATTTTGTGAGACG CAAAAAGAGAAGTCGACGTTTTGGGCTCCTGTCGTCCGACACCACCATTA ACCTCTTCAGGTGCTGGGGAGGAACTGCCGCTTCCTGCAAGGTCCGGACA CAGACCCTAAGGCGGTGGAAAAGATTCGAAAGGTGAGAGAGCATGGAGCT GCGTGAGTTGCACACCCACCGAACCATAGCGGACGGGGAAAATAAATCCC CTAAGCGTACCCGCAACAACCCCAAGGTGCCTCGATGACAGGCGGGAGTT GAGGGTACACGCTACAGTATATATGTATGTATGTGTGGTCATCACATATA GTAGAGTACAGATCAACCGGATAAAGTTGCTAATCCTGTTCATGGTCAGC TGAACAGCTGTGGGTTGTGCTACGAGTACTGTAATGGAGTTCCCAAAAAG AATGCGATTTTTCTTGACGTTCTGCTTTCTTTTGCCCTCTAGATATCGCC AAGCCCCTCTCTCGTCCGCCCCGGGTGAATCAGTGCCTGTGTCTCCCTGT AGCAGCTACAGAGGTACTTCAAAGAGTCGTTTTCTGCTACTTCACACTGT ACACACTATTGTTCGTCGTCATTTTGTACAAATGAGGGGTTTGAGTGTGT CGTCTCTCTCGCTGTCCGATCCTTTTCCTTTAAAAAAAAAACGGTACTTG GTACCTATGTTTTACTTATGTTTTACTATGTTTTATCCTTTGTCACCCCG TGCCGAACCCGACCACGCCTTTATCGCGCACCCCCTTGTTGGCGTTTCTT GTGTATGCCTATGCCTACACCTGCACCTTTATCGCTGTGCTCACATTCCG GTCTCGGGTGTGTGATCAATTTCCTGCGGCACGGCGGCTTGGCGATCGAT GTGATCGGGACGTGAACCTTTTCAGGCCATCGAGAAGGGCGTGGTGAGGC TTCCGGCTAGCGCTATTATAGTATATATTTTTTCGTCCCTCGTGTATCTT TCTGTCTCGGTGGATATTTTTGTCTCCCGTATCATATATGTTTTCCTGTA TTTTTTTCGTCCCTCGTGTATCTTTCTTGTCGCGTATCTTATTTGTCACG TTTTTTTTCTTCTTTTTTCTGTTTCGATTAGAAATATCACCTCGTAAGTC CTTCTCGGGGGCGTCTCGGCCTTTCCGGTCACTCTCCCCCCCCACCCCCC AAAACATAAAAGGAGCCGTATGTGTTGAAATGCGCTCCCCCCCCCCTTTG ATCCCGCCGCGAACGCGTCGGCAAAACCCCCTATCCTCGAGAGCAGGACA CGTCGGTTTGCCTCCGCAACTACCGCGTGGACGGGGTTATGTTCTGGAAC CAATTCTTCATTGCTGCCCTGCGGGACTCGGAGGGCACCGTGATCAACTA CGTGGGTGTGCAGTGCCGAGTGGATGAAGACTTCGTGCGCGCCGCCCAGA AACGGGAAGGAGAGGAAGGAGACGCAGACGGTGACGAGGAGGAGGATGAC GAAGAGGACGGTGACGACGACAGAAGCGACGCGGAAGATAAGGATGCTCC AGCATGCTGAGATGGCTTTTTTTCTTCTTATTTTCTTCATCATATCCCGT CTACCCTGTGTGTGTACGTACGTACCTAGACGG
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Coding sequence (CDS) from alignment at F-serratus_M_contig130:63348..67230-

>mRNA_F-serratus_M_contig130.2224.1 ID=mRNA_F-serratus_M_contig130.2224.1|Name=mRNA_F-serratus_M_contig130.2224.1|organism=Fucus serratus male|type=CDS|length=1560bp|location=Sequence derived from alignment at F-serratus_M_contig130:63348..67230- (Fucus serratus male)
ATGGCGGGGGGGAAGCGACCTCGGCAAGGGGGACGAAACATGACGGAGCA
GCAGAAGCTGGATCGGAGATGGCGGGGGGGAAGCGACCTCGGCAAGGGGG
ACGAAACATGACGGAGCAGCAGAAGCTGGATCGGAGGGAGCGCAATCGGG
AGCATGCGAAGCGGTCGCGGGTGCGCAAGAAGTTCCTGCTAGAGTCGTTG
CAGAAGAGCGTGACGGCGCTGCAGGAGGAGAACGAAAAACTGAGAGGCGC
CATAAGGACCAACCTTGGCGCGGACGAGGCAAAGGAGCTGCTCTCGCAGA
CGGACACGTCGAGTCTCATCAGCAGTTCCCCGGGAGACGCCACGAAGGGA
GCGCAATCGGGAGCATGCGAAGCGGTCGCGGGTGCGCAAGAAGTTCCTGC
TAGAGTCGTTGCAGAAGAGCGTGACGGCGCTGCAGGAGGAGAACGAAAAA
CTGAGAGGCGCCATAAGGACCAACCTTGGCGCGGACGAGGCAAAGGAGCT
GCTCTCGCAGACGGACACGTCGAGTCTCATCAGCAGTTCCCCGGGAGACG
CCACGAAGGTCCTGGACGATCCCGACTACTCCTTGGTGAAGGCGTTGCAG
ACGGCGCAGCAGAACTTCGTCATCACCGACCCGACTTTGCCCGATAACCC
CATCGTCTTCGCCAGCCAAGGCTTCCTAGAGCTTACCGGGTACACCCTCG
ATCAGGTCCTGGACGATCCCGACTACTCCTTGGTGAAGGCGTTGCAGACG
GCGCAGCAGAACTTCGTCATCACCGACCCGACTTTGCCCGATAACCCCAT
CGTCTTCGCCAGCCAAGGCTTCCTAGAGCTTACCGGGTACACCCTCGATC
AGGTGCTGGGGAGGAACTGCCGCTTCCTGCAAGGTCCGGACACAGACCCT
AAGGCGGTGGAAAAGATTCGAAAGGTGCTGGGGAGGAACTGCCGCTTCCT
GCAAGGTCCGGACACAGACCCTAAGGCGGTGGAAAAGATTCGAAAGGCCA
TCGAGAAGGGCGTGGCCATCGAGAAGGGCGTGGACACGTCGGTTTGCCTC
CGCAACTACCGCGTGGACGGGGTTATGTTCTGGAACCAATTCTTCATTGC
TGCCCTGCGGGACTCGGAGGGCACCGTGATCAACTACGTGGGTGTGCAGT
GCCGAGTGGATGAAGACTTCGTGCGCGCCGCCCAGAAACGGGAAGGAGAG
GAAGGAGACGCAGACGGTGACGAGGAGGAGGATGACGAAGAGGACGGTGA
CGACGACAGAAGCGACGCGGAAGATAAGGATGCTCCAGCATGCTGAGACA
CGTCGGTTTGCCTCCGCAACTACCGCGTGGACGGGGTTATGTTCTGGAAC
CAATTCTTCATTGCTGCCCTGCGGGACTCGGAGGGCACCGTGATCAACTA
CGTGGGTGTGCAGTGCCGAGTGGATGAAGACTTCGTGCGCGCCGCCCAGA
AACGGGAAGGAGAGGAAGGAGACGCAGACGGTGACGAGGAGGAGGATGAC
GAAGAGGACGGTGACGACGACAGAAGCGACGCGGAAGATAAGGATGCTCC
AGCATGCTGA
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