prot_F-serratus_M_contig130.2268.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig130.2268.1
Unique Nameprot_F-serratus_M_contig130.2268.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length370
Homology
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BLAST of mRNA_F-serratus_M_contig130.2268.1 vs. uniprot
Match: A0A835ZK32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK32_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 9.570e-5
Identity = 29/75 (38.67%), Postives = 42/75 (56.00%), Query Frame = 0 
Query:  226 VADVPMELLGEATSTGEDPSHPPCAAVDGTPLSFWMSTGLFPQTLMIRLVRPIVVYEVSQVAVECGGVHTALLQL 300
            +  V  +L+  AT +  DP HPP   +DG   +FW +TGL PQ L+++L R +VV   S + V C GV    + L
Sbjct:  126 LTQVQHQLVCAATGSCADPRHPPETVIDGRSDTFWATTGLLPQCLLLQLRRAVVV---SSIEVHCKGVAALSVSL 197
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2268.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZK32_9STRA9.570e-538.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008979Galactose-binding-like domain superfamilyGENE3D2.60.120.260coord: 228..328
e-value: 7.0E-9
score: 37.7
IPR008979Galactose-binding-like domain superfamilySUPERFAMILY49785Galactose-binding domain-likecoord: 236..286

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:732869..739096 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2268.1mRNA_F-serratus_M_contig130.2268.1Fucus serratus malemRNAF-serratus_M_contig130 732051..739401 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig130.2268.1 ID=prot_F-serratus_M_contig130.2268.1|Name=mRNA_F-serratus_M_contig130.2268.1|organism=Fucus serratus male|type=polypeptide|length=370bp
MEARALSVLEVRSRDQAKAHAEQSRSVSLSPRLRCGQRLDENLEDKRNAP
RPFQYQEFSRGMAPSQLIMNKTLATASATTICRNRRDSLEGYDHFSSRAD
STRKIVDIDEGRVGKRKGQEASSAEAKPADDHPGSTHRFGISVLPSIPEH
RVPERRLYAKEALDGENVEGENDGQGGRAKSSKASSLSSINAHVEDDDKI
EERNNSGGGSVISALDSALSCRERRVADVPMELLGEATSTGEDPSHPPCA
AVDGTPLSFWMSTGLFPQTLMIRLVRPIVVYEVSQVAVECGGVHTALLQL
GSSGGHHQLTTEDSMGPPWECISKVTEDKKVLVRVTAMYALDRVMPSRGW
YFARQAGSATATQTDCLSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008979Galactose-bd-like_sf