mRNA_F-serratus_M_contig1013.223.1 (mRNA) Fucus serratus male
Overview
Homology
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: D7FK63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK63_ECTSI) HSP 1 Score: 190 bits (482), Expect = 1.970e-55 Identity = 157/229 (68.56%), Postives = 172/229 (75.11%), Query Frame = 1 Query: 175 MQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDE-DAIEMERLERELLEEKKRLRAERVAGKGRGGGGRVYKPGKVGRGVAGSAEGTAEERWSLAAVSKRLAANMPTKPRKGSTKRGGSSLGAETSLEKGKKKGXXXXXXXXXXXXXXXXXXAASALVDKARGSLPRTELSKGKKRK 858 MQEIKDRKERL XXXXXXXXXXXXXXELGV+EDL SFDIK +ARE AKAKA++ V+VDFEDGHTQ MFGDTVTVTTV GIPDSDDE DA E RLE+ELL+EKKR RAER+ +GR GVAG +EG EERWSLAAVSKRLAANMP KPRKG+ KR XXXXXXXXXXXXXXX +AL+DKARGS+PR ELSKGKKR+ Sbjct: 1 MQEIKDRKERLEXXXXXXXXXXXXXXELGVKEDLGSFDIKGKARENAKAKAEQLVQVDFEDGHTQAMFGDTVTVTTVVGIPDSDDEEDARETARLEKELLQEKKRKRAERLE-RGRX---XXXXXXXARGGVAGDSEGAKEERWSLAAVSKRLAANMPAKPRKGAAKRXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXAALMDKARGSMPRAELSKGKKRR 216
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A836CPQ3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CPQ3_9STRA) HSP 1 Score: 112 bits (280), Expect = 3.200e-25 Identity = 88/225 (39.11%), Postives = 108/225 (48.00%), Query Frame = 1 Query: 43 MGRRISKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGV-QEDLDSFDIKARAREEAKAKADEQVRV-DFEDGHTQTMFGDTVTVTTVEGI-PDSDDEDAIEME---------------RLERELLEEKKRLRAERVAGKGRGGGGRVYKPGKVGRGVAGSAEGTAEERWSLAAVSKRLAANMPTKPRKG 663 MG K G ++P E+ FDP+AR +YL GFHKRK RRRFGLAMQ+IKDRKERL ELG+ DL FD+KA+ R+ A + V DF D T+ MFG VTVTT GI P SDDE+ E ++ EL E K+ A + WSLAAV++R+AA MPTK R G Sbjct: 1 MGGGDRKKGKKRPITEISFDPEARTEYLQGFHKRKQERRRFGLAMQQIKDRKERLEERKEKRVANQEKLDELGLGSRDLGEFDMKAQRRKATAADPERGAEVVDFADDATRAMFGGDVTVTTTFGIAPGSDDEEDGGREXXXXXXXXXXXSGAGHMDEELREHKRAKLARHAQ----------------------------DAHWSLAAVTRRVAAKMPTKKRHG 197
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A6H5K5F5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5F5_9PHAE) HSP 1 Score: 105 bits (262), Expect = 7.820e-24 Identity = 94/163 (57.67%), Postives = 102/163 (62.58%), Query Frame = 1 Query: 373 MFGDTVTVTTVEGIPDSDDE-DAIEMERLERELLEEKKRLRAERVAGKGRGGGGRVYKPGKVGRGVAGSAEGTAEERWSLAAVSKRLAANMPTKPRKGSTKRGGSSLGAETSLEKGKKKGXXXXXXXXXXXXXXXXXXAASALVDKARGSLPRTELSKGKKRK 858 MFGDTVTVTTV GIPDSDDE DA E RLE+ELL+EKKR GVAG +EG EERWSLAAVSKRLAANMP KPRK + K XXXXXXXXXXXXXXX +AL+DKARGS+PR ELSKGKKR+ Sbjct: 1 MFGDTVTVTTVVGIPDSDDEEDARETARLEKELLQEKKRXXXXXXXXXXX-----XXXXXXXXXGVAGDSEGAKEERWSLAAVSKRLAANMPAKPRKAAAKXXXXXXXXXXXXX---------XXXXXXXXXXXXXXXXXAALMDKARGSMPRAELSKGKKRR 149
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A8K1C2G3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C2G3_PYTOL) HSP 1 Score: 82.0 bits (201), Expect = 2.700e-14 Identity = 55/141 (39.01%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 43 MGRRISKDGGRKP------KVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQE---DLDSFDIKARAREEAKAKADEQVRV-DFEDGHTQTMFGDTVTVTTVEGIPDSDDED 435 MG+ S GG+KP K+ + FD D RK++LTGFHKRK RRRFGL M+ K +K+ + L ++E D + + A + E++ + +E +V F+D HTQ+ FGD VTVTT G SD ED Sbjct: 1 MGKNKSHGGGKKPANKKKSKLVITFDADKRKEFLTGFHKRKQERRRFGLDMEAYKQKKKLMEARKQRREEHKQMLERLNIKEGDEDEAATNNVAESDEDSDSDQEEATKVMTFDDVHTQSKFGDVVTVTTSVGDLKSDSED 141
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: W7TCP2_9STRA (Nucleolar protein 12 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TCP2_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 5.940e-13 Identity = 57/141 (40.43%), Postives = 77/141 (54.61%), Query Frame = 1 Query: 37 HTMGRRISKDGGRKP--KVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXEL-----GVQEDLDSFDI-KARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDED 435 HT R K GG K K+ +VFDP+AR++YLTGF KRK RR FGLAMQ++K+RK RL +L G + L + + +E + KA E+V ++D T FG++V VTT GIP D+ED Sbjct: 26 HTHARL--KIGGYKKNGKLALVFDPEARREYLTGFSKRKKERRTFGLAMQQVKNRKARLMEREELRKAKKGALDDLPASIKGAEPYLSGTALANGKEKETMETKAKEEV---YDDRFTTATFGESVLVTTSFGIPSGDEED 161
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A7S1UHQ2_9STRA (Hypothetical protein (Fragment) n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UHQ2_9STRA) HSP 1 Score: 76.6 bits (187), Expect = 1.750e-12 Identity = 57/148 (38.51%), Postives = 76/148 (51.35%), Query Frame = 1 Query: 70 GRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSF-------------------DIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERL 456 G+K ++EV FDP+ARK++LTGF KRK+ RRR GLAMQ +KDR+E L V E D+ D K A E+ A +E ++F D TQ FGD VTVTT G+ ++DDE + + RL Sbjct: 8 GKKRRLEVSFDPEARKEFLTGFRKRKLERRRHGLAMQALKDRRELLETRKELRENRRASRRGTTVDELKDAEAEEAXXXXXXXXXXXXXDEDTKPAASEKTSASREE---LEFTDNVTQERFGDVVTVTTTLGL-EADDEGSDDEARL 151
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A5D6XSU7_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XSU7_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 7.740e-12 Identity = 50/121 (41.32%), Postives = 63/121 (52.07%), Query Frame = 1 Query: 73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDED 435 +K K+ V FDP+ R +YLTGFHKRK RRRFGL M+ K K L +L + E K A ++ K A V + F+D HTQ+ FGD VTVTT G SD+ D Sbjct: 47 KKSKLVVTFDPEKRTEYLTGFHKRKQERRRFGLDMEAFKQHKRLLEARKQRREEQKEQLAKLNLLEPPADEAAKPGASDDEKDAAVTNV-LQFDDEHTQSKFGDVVTVTTSVGDLKSDESD 166
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: W4G9Q9_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G9Q9_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 2.390e-11 Identity = 57/137 (41.61%), Postives = 68/137 (49.64%), Query Frame = 1 Query: 76 KPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAK-----ADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELL 471 K K+ V FD D RKDYLTGFHKRK RRRFG M+ K +K + + ++ A E A K D +V VDF+D HTQ FGD VTVTT G SD ED ++ E E ELL Sbjct: 15 KSKLIVTFDADKRKDYLTGFHKRKQDRRRFGHDMEAFKKQKALIEARKIRK---------------AEQHELMASLPEVANVKPVATDGDTEV-VDFDDAHTQGKFGDVVTVTTSVGELKSDSEDELDDE--EHELL 133
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A7S2G4S7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G4S7_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 2.800e-11 Identity = 53/127 (41.73%), Postives = 67/127 (52.76%), Query Frame = 1 Query: 58 SKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTT-VEGIPDSDDED 435 SKD K K+ + FD DAR DYLTGF KRK RR+FGLAM E+K +KERL E + + + +E + K V ++D T MFGD VTVTT + G P SDDE+ Sbjct: 6 SKDEMGKRKLTISFDADARLDYLTGFRKRKAQRRKFGLAMGEMKKQKERLEERQMRR--------EANKEARHADKQKQQQILDETREKRVAPVTSQYDDATTLDMFGDVVTVTTSLGGPPLSDDEE 124
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Match: A0A067CFI3_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CFI3_SAPPC) HSP 1 Score: 70.5 bits (171), Expect = 1.820e-10 Identity = 56/144 (38.89%), Postives = 72/144 (50.00%), Query Frame = 1 Query: 73 RKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDRKERLXXXXXXXXXXXXXXXELGVQEDLDSFDIKARAREEAKAKADEQVRVDFEDGHTQTMFGDTVTVTTVEGIPDSDDEDAIEMERLERELLE-EKKRLRAER 501 +K K+ V FD D RKDYLTGF KRK RRRFG M+ K +K + + + D+K A ++ KA V+F+D HTQ FG+ VTVTT G SD ED + E E+ L KK+ RA R Sbjct: 9 KKSKLVVTFDADKRKDYLTGFSKRKQERRRFGHDMEAFKKQKILIEQRKIRKAEQKKLMESIP-----EVADVKHVAEDDDKAV------VNFDDAHTQDKFGNVVTVTTTVGELKSDSEDELSDEEQEQLLAHLAKKKERANR 141 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1013.223.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1013.223.1 >prot_F-serratus_M_contig1013.223.1 ID=prot_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=polypeptide|length=275bp MGRRISKDGGRKPKVEVVFDPDARKDYLTGFHKRKVARRRFGLAMQEIKDback to top mRNA from alignment at F-serratus_M_contig1013:242993..249897+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1013.223.1 ID=mRNA_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=mRNA|length=6905bp|location=Sequence derived from alignment at F-serratus_M_contig1013:242993..249897+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1013:242993..249897+ >mRNA_F-serratus_M_contig1013.223.1 ID=mRNA_F-serratus_M_contig1013.223.1|Name=mRNA_F-serratus_M_contig1013.223.1|organism=Fucus serratus male|type=CDS|length=1650bp|location=Sequence derived from alignment at F-serratus_M_contig1013:242993..249897+ (Fucus serratus male)back to top |