mRNA_F-serratus_M_contig130.2260.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig130.2260.1
Unique NamemRNA_F-serratus_M_contig130.2260.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig130.2260.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig130contigF-serratus_M_contig130:616989..618247 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSerine/threonine/dual specificity protein kinase, catalytic domain
Ec32 orthologEc-12_004860.1
Exons2
Model size298
Cds size297
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929250.0041983-CDS-F-serratus_M_contig130:616988..6170751622929250.0041983-CDS-F-serratus_M_contig130:616988..617075Fucus serratus maleCDSF-serratus_M_contig130 616989..617075 +
1690962768.9425817-CDS-F-serratus_M_contig130:616988..6170751690962768.9425817-CDS-F-serratus_M_contig130:616988..617075Fucus serratus maleCDSF-serratus_M_contig130 616989..617075 +
1622929250.0189128-CDS-F-serratus_M_contig130:618037..6182471622929250.0189128-CDS-F-serratus_M_contig130:618037..618247Fucus serratus maleCDSF-serratus_M_contig130 618038..618247 +
1690962768.9602807-CDS-F-serratus_M_contig130:618037..6182471690962768.9602807-CDS-F-serratus_M_contig130:618037..618247Fucus serratus maleCDSF-serratus_M_contig130 618038..618247 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig130.2260.1prot_F-serratus_M_contig130.2260.1Fucus serratus malepolypeptideF-serratus_M_contig130 616989..618247 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig130.2260.1

>prot_F-serratus_M_contig130.2260.1 ID=prot_F-serratus_M_contig130.2260.1|Name=mRNA_F-serratus_M_contig130.2260.1|organism=Fucus serratus male|type=polypeptide|length=99bp
MELCERGVKRKSVLWKPNDHVSKGLGLKGTNMTSRATLGLDALYSAVGSD
ARRKRACPLVSPDVPPCRNAAEEAMERPPFRRGSPTRLVWTSPKVTTPL
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mRNA from alignment at F-serratus_M_contig130:616989..618247+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig130.2260.1 ID=mRNA_F-serratus_M_contig130.2260.1|Name=mRNA_F-serratus_M_contig130.2260.1|organism=Fucus serratus male|type=mRNA|length=1259bp|location=Sequence derived from alignment at F-serratus_M_contig130:616989..618247+ (Fucus serratus male)
ATGGAGCTATGCGAACGGGGCGTGAAGAGGAAATCCGTGCTATGGAAGCC
TAATGATCATGTTTCTAAGGGCTTGGGTCTCAAAGGAGTAAGTTTGCTCA
CAAAGTATGAGTCCGTCTGATATTTAAAAGTCAAGCTGCTACTCACTGCC
CAGAATAACCATAGTACTTGTTGTAGAGTTCCTCCACAAGTACAGCGTTG
TGTGTGTGTGTGTGTGTTCCCATTTATTCTGGACGTCAAGTTCGTTGGAT
GTACCAGTCGGGGTCACACAGGAGGAAAGTCGCACGGGATTTCTGATCCA
CCTTCTTTCTGCGGGTGTTGTACGGGGTACATAGTTTTACCGCTGAGCAG
TATTTTCCGTTGTATTTTGGTATTTTATTTTTCATCTATCCGGGGTATCT
ATCTGACTTCAGTGCATGTAATATGCCAACAGGAGCAGACCGTTGTGGCC
CAGCTACGTCCGTAGCTGTGGTTTTAGCGAACCTGGTATCCGGCTTTCGC
GTGATCAGAGTCACGTGGTACGTGTTAAACCGAAATTTTGACGTGGGTCT
TACTACCGTGCTCCCGTAATGCCTCGTCGCTCCAGACAAATAACAGAGCT
ACGTGCCTTTTGAGCATTTGAAGCTGCCCGGCGAATGCACTTTTCGATAA
GCTCATACTTGTACATGTACCAGTACTGGGCCTGTATGTAACTGACTGCC
TGCCCTCGTTGAAATATAGAAACTCGACACATACTTGTACTGTTAAACAG
TAGCTGAAAAAGCTCAAGATTGTGTGCCACATGGTATTATCCTCACGAAA
CAAAACAAAACATACCCAACAAATGGGGAACGATTTATTCGTGGGTACAA
AAAATTCGACTTCACAGTCGACGAGGGAAAGGGACGCGACTGAATCCTTC
TCGCGTTAAAAATTAAGGTGAGCAGCGCAAAAGGAAGGTGGATGAGAAAT
CCTGTGTGACCCCGGCGCGTCCACAAGTCTGACGTCCAGAATGAATGGGT
GACAACACGCACAACACTCGAATGTTTCCGCTCCGTGAACGTCGTGCAGA
CGAATATGACGTCCCGTGCCACGCTCGGGCTGGATGCACTGTACTCCGCT
GTCGGTTCCGACGCCCGTCGCAAGCGAGCTTGTCCATTGGTGTCACCCGA
TGTCCCGCCCTGCCGAAACGCTGCAGAGGAAGCTATGGAGAGACCACCTT
TCCGACGCGGGAGCCCAACGAGATTGGTTTGGACGAGTCCCAAGGTGACG
ACCCCACTA
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Coding sequence (CDS) from alignment at F-serratus_M_contig130:616989..618247+

>mRNA_F-serratus_M_contig130.2260.1 ID=mRNA_F-serratus_M_contig130.2260.1|Name=mRNA_F-serratus_M_contig130.2260.1|organism=Fucus serratus male|type=CDS|length=594bp|location=Sequence derived from alignment at F-serratus_M_contig130:616989..618247+ (Fucus serratus male)
ATGGAGCTATGCGAACGGGGCGTGAAGAGGAAATCCGTGCTATGGAAGCC
TAATGATCATGTTTCTAAGGGCTTGGGTCTCAAAGGAATGGAGCTATGCG
AACGGGGCGTGAAGAGGAAATCCGTGCTATGGAAGCCTAATGATCATGTT
TCTAAGGGCTTGGGTCTCAAAGGAACGAATATGACGTCCCGTGCCACGCT
CGGGCTGGATGCACTGTACTCCGCTGTCGGTTCCGACGCCCGTCGCAAGC
GAGCTTGTCCATTGGTGTCACCCGATGTCCCGCCCTGCCGAAACGCTGCA
GAGGAAGCTATGGAGAGACCACCTTTCCGACGCGGGAGCCCAACGAGATT
GGTTTGGACGAGTCCCAAGGTGACGACCCCACTAACGAATATGACGTCCC
GTGCCACGCTCGGGCTGGATGCACTGTACTCCGCTGTCGGTTCCGACGCC
CGTCGCAAGCGAGCTTGTCCATTGGTGTCACCCGATGTCCCGCCCTGCCG
AAACGCTGCAGAGGAAGCTATGGAGAGACCACCTTTCCGACGCGGGAGCC
CAACGAGATTGGTTTGGACGAGTCCCAAGGTGACGACCCCACTA
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