prot_F-serratus_M_contig13.2219.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig13.2219.1
Unique Nameprot_F-serratus_M_contig13.2219.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length242
Homology
BLAST of mRNA_F-serratus_M_contig13.2219.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI)

HSP 1 Score: 216 bits (551), Expect = 4.660e-62
Identity = 133/249 (53.41%), Postives = 154/249 (61.85%), Query Frame = 0
Query:    1 MEKVRGDDELFEILSQMGGSYRDSDKTAKNVPDERSQMNLREDQKFIGGTDDPICVPEAGWNRSIWNPHVGDSSISGGVISVGALHLPQGSVSAAEAKGSGPWPSGAGQGATWTRPASPQEEVLRQQAVAVVFSRFQALCKELGIQAKNEVFERWQFSKKLKEGPGGDPILPAAAFFDPGLDAELRELGVTKSQAKKVCSELGRASKSALKTLSKQLR-------AGAGYSKKRVVAKKTDESTYVLQL 242
            M +VRGDDEL E+L  MGG   + D T    P E S+          G   +  CVPE GWN SIWNPHV + + +  V  V                      S  G+G    R  SPQEEVLRQQAVA+VFSRFQ L KELGI+ KNE+FERWQFS+KLKEG GGDPILPA +FFDPGLDAEL+ LGV K+Q++ +C ELGRASKSALKTL KQLR       A      KRV A+K D +TYVLQL
Sbjct:    1 MTRVRGDDELLELLGIMGGDNGEQDAT---TPAETSRDTRTHPAPAAG---EFACVPETGWNSSIWNPHVFEPAAAPTVFGVA---------------------SRTGEGLR--RVVSPQEEVLRQQAVAIVFSRFQVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPSKRVAARKLDGNTYVLQL 220          
BLAST of mRNA_F-serratus_M_contig13.2219.1 vs. uniprot
Match: A0A6H5LQ06_9PHAE (PCIF1_WW domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LQ06_9PHAE)

HSP 1 Score: 151 bits (381), Expect = 1.610e-38
Identity = 122/329 (37.08%), Postives = 141/329 (42.86%), Query Frame = 0
Query:    1 MEKVRGDDELFEILSQMGGSYRDSDKTAKNVPDERSQMNLREDQKFIGGTDDPICVPEAGWNRSIWNPHVGDSSISGGVISVGALHLPQGSVSAAEAKGSGPWPSGAGQGATWTRPASPQEEVLRQQAVAVVFSRFQA-------------------------------------------------------------LC-------------------------------------------------KELGIQAKNEVFERWQFSKKLKEGPGGDPILPAAAFFDPGLDAELRELGVTKSQAKKVCSELGRASKSALKTLSKQLRA 219
            M +VRGD+EL E+L  MGG   + D      P E S+          G   +  CVPE GWN SIWNPHV +                     AA A G G   S  G+G    R  SPQEEVLRQQAVA+VFSRFQA                                                             LC                                                 KELGI+ KNE+FERWQFS+KLKEG GGDPILPA +FFDPGLDAEL+ LGV K+Q++ +C ELGRASKSALKTL KQ+ A
Sbjct:    1 MTRVRGDNELLELLGIMGGDNGEQDA---KTPAETSRDTRTHPAPAAG---EFACVPETGWNSSIWNPHVFEP--------------------AAAATGFGV-ASRTGEGVR--RVVSPQEEVLRQQAVAIVFSRFQARRKTRGACDSCLLPATPTAVAGGLFRLLRELGGQGGGAKDREIPGNPCVVLRAQGLMIYASLCNAHNGRGTLAFQTPRPSSGSLTPAVTAVAFVPPEHGVLPHASPAMQVLGKELGIRVKNEMFERWQFSRKLKEGRGGDPILPAESFFDPGLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQVAA 300          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2219.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FYX1_ECTSI4.660e-6253.41PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5LQ06_9PHAE1.610e-3837.08PCIF1_WW domain-containing protein n=2 Tax=Ectocar... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:1332935..1343812 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2219.1mRNA_F-serratus_M_contig13.2219.1Fucus serratus malemRNAF-serratus_M_contig13 1332935..1343812 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig13.2219.1 ID=prot_F-serratus_M_contig13.2219.1|Name=mRNA_F-serratus_M_contig13.2219.1|organism=Fucus serratus male|type=polypeptide|length=242bp
MEKVRGDDELFEILSQMGGSYRDSDKTAKNVPDERSQMNLREDQKFIGGT
DDPICVPEAGWNRSIWNPHVGDSSISGGVISVGALHLPQGSVSAAEAKGS
GPWPSGAGQGATWTRPASPQEEVLRQQAVAVVFSRFQALCKELGIQAKNE
VFERWQFSKKLKEGPGGDPILPAAAFFDPGLDAELRELGVTKSQAKKVCS
ELGRASKSALKTLSKQLRAGAGYSKKRVVAKKTDESTYVLQL
back to top