mRNA_F-serratus_M_contig13.2199.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig13.2199.1
Unique NamemRNA_F-serratus_M_contig13.2199.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A6H5KKI6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKI6_9PHAE)

HSP 1 Score: 206 bits (524), Expect = 9.320e-61
Identity = 117/215 (54.42%), Postives = 144/215 (66.98%), Query Frame = 3 
Query:  180 FQKTVVSTVSRAGKQHRRLSPWMFMHGRRDRSTIVGPLAMSGPMDGDPHKQYPETGTARDSMSTSSVGGISREYFIVGGSLGLLGLGYMRGLQDERAYRIRKRNLFKTIAGDG-NDFRDILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            F  T     +RAG+     S  ++    R R   V PL MS        K+  E  +    +S + +   SRE  + GG     G  Y+   QD+ +YR RKR+LF++IAG G N+FRDILEVGVGGNPKVGGF+NL FYR GQRI+G+DP+LS +PS  LE A +KA+  GLTLRGVGG+AE+LPFE+GSFDAVVSTLVFCSVRDPAAALREVS
Sbjct:   30 FCPTTAKAQARAGRYTSCTSSSLY----RRREEYVAPLDMSS-------KEEQERASENKYLSVTKL---SREQVLFGGLAACFGSAYLGASQDQTSYRARKRDLFRSIAGGGENEFRDILEVGVGGNPKVGGFNNLEFYRRGQRIIGVDPTLSGEPSQALERATEKAQKLGLTLRGVGGIAEELPFETGSFDAVVSTLVFCSVRDPAAALREVS 230
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A835Z8C0_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8C0_9STRA)

HSP 1 Score: 98.2 bits (243), Expect = 4.520e-20
Identity = 71/186 (38.17%), Postives = 93/186 (50.00%), Query Frame = 3 
Query:  363 MSTSSVGGISREYFIVGGS-LGLLGLGYMRGLQDERAYRIRKRNLFKTIAGDG-------------NDFRDILEV------GVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSE-------------KPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            MS SS     R   I GGS L   GL +    +D+  Y  RKR LF+ ++ D               D R  L +      G+GGNP +GGF+NL +Y  G  + G+DP+L +               +L +  A  KA   G+ L  VGG AE LP  + S DAVVSTLVFCSV+DPA A+ EV+
Sbjct:    1 MSMSS----RRSVVIAGGSTLAAWGLVFAATSRDDVEYDARKRRLFQALSADQIEGGLHVLEAIAVKDNRMQLSITHNARIGIGGNPTLGGFTNLEYYPRGTVLSGVDPALEDGAAGGIVRAAQCASAALAVTDAAVKAARLGIDLTAVGGRAEQLPIATASCDAVVSTLVFCSVQDPAQAMSEVA 182
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: D7FYW0_ECTSI (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYW0_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 9.130e-18
Identity = 45/55 (81.82%), Postives = 49/55 (89.09%), Query Frame = 3 
Query:  657 LELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            LE A +KA+  GLTLRGVGG+ E+LPFES SFDAVVSTLVFCSVRDPAAALREVS
Sbjct:   84 LERATEKAQKLGLTLRGVGGIVEELPFESSSFDAVVSTLVFCSVRDPAAALREVS 138
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A4D9CZT3_9STRA (Methyltransf_11 domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZT3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 9.940e-17
Identity = 54/134 (40.30%), Postives = 77/134 (57.46%), Query Frame = 3 
Query:  447 RGLQDERAYRIRKRNLFKTIAGDGN-------DFR--DILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            + L +ERAY    + LF  ++  G+       D R   +LE+GVG         N+ +Y  G  +VG+DP+L++     + +A+ KAKA+ +    + G AE LPF   SFDAVVSTLVFCSV+D A AL EV+
Sbjct:   77 KSLNEERAYEGLHQELFALLSASGSGAGEAGKDVRALKVLEIGVGQGV------NVKYYPSGCEVVGLDPNLNQDA---MSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVA 201
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: W7TRI3_9STRA (S-adenosylmethionine-dependent methyltransferase domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TRI3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 2.780e-16
Identity = 55/134 (41.04%), Postives = 77/134 (57.46%), Query Frame = 3 
Query:  447 RGLQDERAYRIRKRNLFKTIA----GDGNDFRDI-----LEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            + L +ERAY    + LF  ++    G G   RD+     LE+GVG         N+ +Y  G  +VG+DP+L++     + +A+ KAKA+ +    + G AE LPF   SFDAVVSTLVFCSV+D A AL EV+
Sbjct:  173 KSLNEERAYEGLHQELFALLSASASGAGEAGRDVRAPKVLEIGVGQGV------NVKYYPSGCEVVGLDPNLNQDA---MSVAQSKAKARNIQWSALEGRAESLPFPDASFDAVVSTLVFCSVQDQARALTEVA 297
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A7S0N8D1_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N8D1_9CHLO)

HSP 1 Score: 85.9 bits (211), Expect = 2.820e-15
Identity = 50/114 (43.86%), Postives = 66/114 (57.89%), Query Frame = 3 
Query:  480 RKRNLFKTIAGDGNDFRDILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            RK+ LF T+       +D+LE+G+G  P      NL +YRPG R+VG++P+         E A +KA+A GL+L    GV E LP E  S D VV TLV C+V DPA  L EV+
Sbjct:  141 RKQALFATLDAGA---KDVLELGIGTGP------NLKYYRPGTRVVGVEPN-----EYMDEYAREKAEALGLSLELRRGVGEALPLEDASVDVVVGTLVMCTVADPARVLAEVA 240
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A7S1XQV9_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XQV9_9STRA)

HSP 1 Score: 79.7 bits (195), Expect = 1.380e-13
Identity = 56/153 (36.60%), Postives = 78/153 (50.98%), Query Frame = 3 
Query:  360 SMSTSSVGGISREYFI-VGGSLGLLGLGYMRGLQDERAYRIRKRNLFKTIAGDGNDFRDILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALRE 815
            S+S ++  G+SR   I +GG    +GL   R  + E AY   KR LF       +    +LEVG+G          L +Y  G R+ G++P L +    N     ++A A+ L L    G  EDLPF  GSFDAVV++LV CS +DP A + E
Sbjct:   19 SLSLAARTGVSRGAAIAIGGYASGVGLWAARVARAESAYSDAKRELFGRYLRPDDA---VLEVGIGLEGAT-----LDYYPKGCRVTGLEPRLRDD---NAAAMRRRATARDLRLELTRGCGEDLPFPPGSFDAVVTSLVLCSAKDPKAVVEE 160
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A8G1BZN5_9BACI (Class I SAM-dependent methyltransferase n=1 Tax=Hydrogenibacillus sp. N12 TaxID=2866627 RepID=A0A8G1BZN5_9BACI)

HSP 1 Score: 78.2 bits (191), Expect = 1.860e-13
Identity = 47/112 (41.96%), Postives = 65/112 (58.04%), Query Frame = 3 
Query:  483 KRNLFKTIAGDGNDFRDILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREV 818
            +R L + +AG+      +LE+GVG         NL FY PG R  GI+P+    P++  + AE++ + +GL    +   AE LPF  G FDAVVSTLV CSV+DP  AL E+
Sbjct:   24 RRALLRPLAGE------VLEIGVGTG------RNLPFYGPGVRWTGIEPN----PAMRRQ-AERRLRERGLAGALIAASAEALPFADGRFDAVVSTLVLCSVQDPRKALAEI 118
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A7S1WP52_ALECA (Hypothetical protein (Fragment) n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1WP52_ALECA)

HSP 1 Score: 77.4 bits (189), Expect = 2.600e-13
Identity = 46/97 (47.42%), Postives = 57/97 (58.76%), Query Frame = 3 
Query:  534 ILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLEL-AEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            +LEVG+ G P      NL FY  G ++ G+D SL   P  + +    ++A+  GL +  V G A  LPFE GSFDAVV T V CSV DP  ALREVS
Sbjct:    9 VLEVGIAGAP------NLEFYPSGTQLTGLDSSL---PGGDQQRDTRERARELGLDISWVMGDASQLPFEDGSFDAVVMTKVLCSVADPEVALREVS 96
[Close]
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Match: A0A813A8F3_SYMMI (METTL7A protein n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A813A8F3_SYMMI)

HSP 1 Score: 78.2 bits (191), Expect = 9.220e-13
Identity = 45/96 (46.88%), Postives = 55/96 (57.29%), Query Frame = 3 
Query:  534 ILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSLSEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCSVRDPAAALREVS 821
            +LEVGVG        SNL  Y PG  +VG+DP +S         A    K +GL    V G AE LPF   SFDAVV++LV CSVR+P  ALRE++
Sbjct:  132 VLEVGVGVETWA---SNLPLYPPGVSLVGLDPEVSA-------YATWPKKPRGLDFEAVRGWAEALPFADNSFDAVVASLVLCSVREPDTALREIA 217
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2199.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KKI6_9PHAE9.320e-6154.42Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A835Z8C0_9STRA4.520e-2038.17Methyltransf_11 domain-containing protein n=1 Tax=... [more]
D7FYW0_ECTSI9.130e-1881.82Methyltransf_11 domain-containing protein n=1 Tax=... [more]
A0A4D9CZT3_9STRA9.940e-1740.30Methyltransf_11 domain-containing protein n=1 Tax=... [more]
W7TRI3_9STRA2.780e-1641.04S-adenosylmethionine-dependent methyltransferase d... [more]
A0A7S0N8D1_9CHLO2.820e-1543.86Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
A0A7S1XQV9_9STRA1.380e-1336.60Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A8G1BZN5_9BACI1.860e-1341.96Class I SAM-dependent methyltransferase n=1 Tax=Hy... [more]
A0A7S1WP52_ALECA2.600e-1347.42Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A813A8F3_SYMMI9.220e-1346.88METTL7A protein n=4 Tax=Symbiodinium TaxID=2949 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:597938..607102 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score90.1
Seed ortholog evalue1.6e-15
Seed eggNOG ortholog2880.D7FYW0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.methyltransferase activity
EggNOG OGsCOG0500@1,KOG4300@2759
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-19_002680.1
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons3
Model size995
Cds size789
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2199.1prot_F-serratus_M_contig13.2199.1Fucus serratus malepolypeptideF-serratus_M_contig13 597973..606931 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929245.824726-UTR-F-serratus_M_contig13:597937..5979721622929245.824726-UTR-F-serratus_M_contig13:597937..597972Fucus serratus maleUTRF-serratus_M_contig13 597938..597972 +
1690962767.0800004-UTR-F-serratus_M_contig13:597937..5979721690962767.0800004-UTR-F-serratus_M_contig13:597937..597972Fucus serratus maleUTRF-serratus_M_contig13 597938..597972 +
1622929245.9267535-UTR-F-serratus_M_contig13:606931..6071021622929245.9267535-UTR-F-serratus_M_contig13:606931..607102Fucus serratus maleUTRF-serratus_M_contig13 606932..607102 +
1690962767.1202888-UTR-F-serratus_M_contig13:606931..6071021690962767.1202888-UTR-F-serratus_M_contig13:606931..607102Fucus serratus maleUTRF-serratus_M_contig13 606932..607102 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929245.8835177-CDS-F-serratus_M_contig13:597972..5984661622929245.8835177-CDS-F-serratus_M_contig13:597972..598466Fucus serratus maleCDSF-serratus_M_contig13 597973..598466 +
1690962767.091874-CDS-F-serratus_M_contig13:597972..5984661690962767.091874-CDS-F-serratus_M_contig13:597972..598466Fucus serratus maleCDSF-serratus_M_contig13 597973..598466 +
1622929245.9030645-CDS-F-serratus_M_contig13:605437..6055231622929245.9030645-CDS-F-serratus_M_contig13:605437..605523Fucus serratus maleCDSF-serratus_M_contig13 605438..605523 +
1690962767.101036-CDS-F-serratus_M_contig13:605437..6055231690962767.101036-CDS-F-serratus_M_contig13:605437..605523Fucus serratus maleCDSF-serratus_M_contig13 605438..605523 +
1622929245.915762-CDS-F-serratus_M_contig13:606722..6069311622929245.915762-CDS-F-serratus_M_contig13:606722..606931Fucus serratus maleCDSF-serratus_M_contig13 606723..606931 +
1690962767.1099954-CDS-F-serratus_M_contig13:606722..6069311690962767.1099954-CDS-F-serratus_M_contig13:606722..606931Fucus serratus maleCDSF-serratus_M_contig13 606723..606931 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig13.2199.1

>prot_F-serratus_M_contig13.2199.1 ID=prot_F-serratus_M_contig13.2199.1|Name=mRNA_F-serratus_M_contig13.2199.1|organism=Fucus serratus male|type=polypeptide|length=263bp
MSNACMLRSSLVLALLLMQRDKNGGATATFLATSRTPWTGMSCLRLPNFQ
KTVVSTVSRAGKQHRRLSPWMFMHGRRDRSTIVGPLAMSGPMDGDPHKQY
PETGTARDSMSTSSVGGISREYFIVGGSLGLLGLGYMRGLQDERAYRIRK
RNLFKTIAGDGNDFRDILEVGVGGNPKVGGFSNLGFYRPGQRIVGIDPSL
SEKPSLNLELAEKKAKAKGLTLRGVGGVAEDLPFESGSFDAVVSTLVFCS
VRDPAAALREVS*
back to top

mRNA from alignment at F-serratus_M_contig13:597938..607102+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig13.2199.1 ID=mRNA_F-serratus_M_contig13.2199.1|Name=mRNA_F-serratus_M_contig13.2199.1|organism=Fucus serratus male|type=mRNA|length=9165bp|location=Sequence derived from alignment at F-serratus_M_contig13:597938..607102+ (Fucus serratus male)
GCAAAAGCTGTCCGCAAAATATCTTCTAACGCATCATGAGCAACGCGTGC
ATGCTTCGATCATCGTTAGTGCTTGCCTTATTATTGATGCAGCGCGATAA
AAATGGGGGGGCAACGGCTACATTTCTTGCGACCAGCAGAACGCCGTGGA
CTGGTATGTCATGTCTACGTCTTCCGAATTTTCAGAAAACAGTTGTCTCC
ACAGTCTCCCGCGCTGGTAAACAACATCGTCGTCTGTCCCCGTGGATGTT
CATGCATGGTCGTCGGGACCGGTCAACGATCGTTGGCCCGCTGGCCATGA
GTGGACCCATGGATGGAGACCCTCACAAGCAATATCCTGAAACTGGCACG
GCAAGGGACAGCATGTCGACTAGTAGCGTAGGAGGCATTTCTCGGGAGTA
CTTCATCGTCGGTGGATCGTTGGGGCTACTCGGGCTTGGCTACATGCGAG
GATTGCAGGATGAACGTGCGTATCGCATTCGGAAGCGGAACTTGTTTAAG
ACCATCGCCGGAGACGGGAATGATTTCAGGTACCGATACAAGTGCAACGT
ACGAACAAGAATGAGCAAGTGTTGGTTCCCGGCAATGGACTGCTATTTTG
AATGACTGGTGGTATCAACAGATGATACTGCTGGTACCAAATTGTAAAGT
TATAGCTACTGCTCGAAATGCCAGTCTCTCTTATATAAATCCCCTATTAA
TAGGGGTAATAGCTCGCTACGAAAACCAAGTCCCTACTTTGAGCTCCACT
CCGACGCGCAACCGCTACAACGTTTTGTCTCTCTTGTTTTCAATAGTGTG
TAACAATCGTAACTCGGGGGGCGCCTCCCCGACATCATGCCTGGTGGTAC
AGTAGTAGATACTGTATATATTTTTTATTTTACGAAATGTACCCACTTGA
ACCGGGCAAGGCAAGAAACCTTGTCTCCCTGAGATACGGTATGTCTGGAG
GGTTTTAATGAGTTTGAAGTTTTCAACGCAATACTGGTACATCGTATTCT
TAGTACGATACGTAGATATATACTTGGAGATTTACTATGACAATATTAAT
AATAACAACTGTCAGCACAAGTACTATTCATATTCATATTAATACCTAAG
ATATAGCACGACGGTAGCCCGGGACAGAAAAATAGCCAGATCGGTTCGAC
CCGCTGAGGTTCGAACCCCCGATTTTGCTTTGACTACGGTAGAGTCATTG
AAGGAGCACGATACCACTCCTGCTGTGAAGTCGGCGCTGATTGGTGCAAG
TAGTTAATTGGTGGTGAGAACTAGCGGTGAAGCTGTTGCGCTTGTTGGTG
GTCATGCCCTTCATTCACCTTCAACACATCGGTCATCAGCCGTGTACGGT
TGCCAACCCTGTATGTGGTCAGCTGAACTGGGACAAAGTTGCATGTCCCC
GCTCGCGCCGGAGAATTTGGTCTCGCGAGACAAGTCACGAAGACGGGTTT
TGTGACCACACGTCTTCGAGGCAGCGACTGCTCCCCGGTAAGCAACAGTA
GCAGCAGAAGAAGAAAAAGAAATATCTGCCATGACGTAGCCATAGCAGGA
TCAGGAGCTCGCTGCAGCCCTCTCGATTACGCAGCCTCTCGGCACCTAAG
AAATATATTTTCTTCCATGACCTCGCTGGCTTTTGGCAGTCCAGCAGAGT
CTGCGCATCGAAGCTAGTGAACTATTTTGACGCACGAAGAGTACCCAAGT
ATATCGGTGAAAAATATCTGCTCACTTCGACGGGGGAGGTGTTGAGCTGA
GATCGCCCAACTGCTCTACATAATGTATTACGCCCTATTCCGGTCATTTT
TCGTCTACAGACTAGTACATTTTTACCCCTGACTGGGGTATAGTATGCTC
AGAAGGTCTAGATGCGTTCAGATTTTTCTTTTAAAATACGTTTTGACATT
TCCCCCCCCTGACTGGGCGATATGCTCAGAAGGTCTAGATGCGTTCAGAT
TTTTCTTTCAAAAATACCTCTGGTCTGTTGCCTTCAAGGCTCTGGGATGA
AAGATTGGTTTTGCTCCGATAAAGCACCGCATGCTGCTTGGCGCATGGAG
CTGTTCCCGCTCAGTTCCGCCGGAGGGTTTGGAAATATTGTTGTTGTTGT
TGTTGTTGTTTCTCACATTCAGCGCATTGGTTGCCAACCCGAAGAAAACT
ACTTTACTCTTTACACGGTGGCCAATCCCGCTCGTGGTCTGCTGAACAGG
GAAAAAAAAAAAAAAAAAGTCTGGCAGGCAGCGTCCCCCCCGTGTGCGCT
GCTCGTTCGGAGAAAAAAATAAAAATCAAATGAAAAAATCACGCGACGCA
TCCACATGTCTAGGCGCTACGCAAGTCCGCGTTATGCAGGTGGTCTCGGT
CCGTCTCGCATCCGTGCAAGGATTCCTACGACTCGTCAGCTAGGCCAATG
GGTGTCGCTTCGCAAAATACTACGCTTCCGTGTGCGATTGCAACTTTCCC
AGTCTCGTTGCCTCTCTCTTCTCCTCGCGATGTCTGGCCGCGTCTTCCTC
TTCTTGCCTCCATGCGGCCATGAACCTCCGCCCACCCTCCGTTACCGCCT
CAACCCAAGCCTCAGCCTTTACCGCCATCGTTTCCCATTCCCCCGTTATG
CCAAACGCCCGGATGTCGCTCTGTACGCAGTCGGTCCATTCTTTCTCCTT
CCCACCCCGTCCTCTACGCACTGCGCCCTCAAGGTTACCGAACATGATTC
GCTTTGGCAACCGCCCGCCGCTCATTCGGAGGAGCGTTCCCGCCCACAGA
AGTCTTCTCGTGCGCAACGTTGTCTCAATACTCTCGCACCCGGTTATCGC
AAGGGCGCGGTTGTACGAGGTCATCCGGTGGTCTGGTTTCTTGCGCTGCG
CTCCGATGATGCGAAGCAAGACCCGGTGGTGTACGGTGCGAAATTTGGCG
TAGTGCTCCTGCCGGAGGGTCCACGTACTGCATCCATACAGAAGGGCTTC
GATTGCTTCGGCCTTTACCATCCGGGTCTTGAGAGAGAGCGCGATTTTCG
GTTGGCTGTAGAGCTCCCGTGAGTACCGCCTGATGCGCATCCAGCATGCG
CGGGTCCGCCTGGCGATTTCAACGGACATATCCGGGGTTTCGGTCACTGC
GCCCCCTAGGTAGGTGAAGGATTGTACCTGTTTGTAGATTTGCCCGGCTG
CTTCGATTCGCACCATCGTCCGCGGTGTACGTGGTGGGGGCATACACATG
GTCTCCGTCTTCTTCGCCGACACGGTTAGCGCGAATGCTCGGCAAACTTC
TACGATAACTTCCATCATCATAGCGAGCCCCTGTGATGATCGCGAGACTA
TGCAGGCGTCATCCGCGTACAGCATGCCCCACACCGCACGGCGGGCGTAG
TCCATAGCCGACTCCGGCCCCATTGACGTCGAGGGCTCCTTCAGGTGCAC
CAGCTCGGCGAGGATGGCCGGTTCCTCACTGAATCTCTGGAGGACAAGGT
TCAGCACGGCTGCGAAGAAGATGTTGAACAGCAGCGGGGACAACACGCAT
CCTTGCCGTAGTCCTTGCTCCACCTCAAACCAATCCGAGCAGACGCCATC
ATCAGGTCGTACACAAGCTCTCATGCCGTCGTGAAATTGTCGGATGACTG
CTATCATCTGCGGTGGTACTCCGATGCGAGTGAGTACCTGCCACAGGAGG
GTGCGGTCAACGGTGTCGTAAGCTTTCTGGAGCCTGCGAACCACAAACAT
CATGTCCGTGGTCGAGCGATCCGGTCGAAACCCGCACTGCTCCTCCGGTA
ACAGTGCCTCACAGTAAGCGCTGAGTCTCCTGGCAACCACTTTAAGGAGA
ACCTTACCCGCGTGTGACACGAGCGAAACTCCGCGGTAGTTTCCGCACTC
CGTCTTGTCGCCCTTCTTGTGGAGTACTATAATAACCGCATCTTTCCACT
GCTGTGGGACTTTTCCCTGGCGCCAGATGAGGACGGTAAGCCGATGGAGC
TCCCGTATGATGGTCCGGTCTTGTTGAAGTCCGAGTTTCAGTAGTTCTGC
GGGAAGGCCATCTGGTCCCACCGCTTTCGCGTTTGCCATTGCTTTCATCG
CTGTGGCAATATCTTCCTCCGTGGGCTCAGTCCCGAGGGCACTCGCGACT
GGATGCTGCGGTAGCCTCTTCGGGATGTCGGCATCGATCATGTCGGATTT
AGAGTTCAGCAGTGAGCGGAAGAATCTCACCCACCTCTCGCGGATACGCC
TCTTGTCGCGCAACAGTCCCCCTTCCTCGTCACGGATGCACTGTGATTCC
ACCTTTTTTGTCTCCTCCAGTTGCACCGATTTGATGTTTTCGAAGAATCC
GTGCTGATCCCCCATGCGCAATTGTTTCTCCAACTCAACGACGTGGCGCT
CGAAGAAACGAACGACTGCTGCACTTCGCACTCTCTTCAGCCATTTACAT
GCCTTCCCGACGGCCCTCCGCAGCTGCGCATCCCTCGTGTCCATTCTTAG
GCGCTGCCATGCTGTGTGCATCGCATCAGTCGCAGCCTGCAGTTCAGCTT
CTGTTCGGGCGTCTCCACTCCAACCTCGCCCCGGTCTCCTTCGTTCCTGA
GGTGGGATCATCAATTCAGCGGTCCGCATGATGGCTGCGGCGAATGCGGC
TTCGACGTCGTCCACACTGCTGTCTCCAGGCGGGTTTGCCCTGAGGTGCC
TCCCAACCGCTGTGGCCACCTCCTGTCGAAGTTGGGGGTCAGTTACCAGG
CGCCTACGGTCCACTGGTGTTTTTTTAGCTGAGGCCCTCAGTCGGCGGTT
TCGGGCAAAATGGCCGAGAAGCTTAACGGGTGCGGACACAATGTTGTGGT
CTAAAATGGGAAGGAAGGGGGGCTGAGGGTGCACCGTAACGTTTCCGTAC
GAATTTGCGATCACGTTGCCTCGTTAGGATGTAGTCGATCCGTTTTTTCC
CTCGCCCGTTGAATGTATGTGATACGCCGCCTTTGGGTGTGCTAAACAAC
GTGTTCACAAGAGCCAGGTCATGGTTGTTAGCGAAAGACAGCAGTAGTTC
TCCGTTGTCGTTGAGGGTATCTCGGCCGTAGGCACCGAGAACTTTGCTAT
CCTTGCTCCCCACCTGTCCATTTTCCCTCCTTCCCGTGCGGGCGTTGGCA
TCCATCAACACGAACAGCTGTTCATTTTTAGGTACCTCTTCCACAACTCT
ATATAGGCTCGTCCAGAATGCATGCTTGTTATTAGCATTCTGTGGTTCAG
TTGGGGCATATGCTACGATAAACGTCACGGCCTTGGCTCTGCCCCGTAGT
TCAAGAGTAACCTTTAACAAGCGATCACTGATAAACTCCGGTGGGCGTGC
AGCACGTGTGATGGAGTTTCTTACAGCTAGCCCTACTCCACCTTGCCCTT
TCTTCCCATCATTCTCGCCACCGCACTCACCGCTGCAGTATACCAGGTAG
CCAGCCTGGCTTTGGGCTGACTGTCCGCTGCGGCGAGTTTCTTGCAAACC
GATGATGTCGCACCCCAGTCGATCGTATACACTCAAAACGTCCAGCGCCC
GTCCAACTCCGTGTGTCCCATCCACCGCCATCGTCCGGACGTTGTGCGTG
GCAACTGCGATCTCCCGTCCTCGCGCACGTGCTCGATTCCTCCTCTTGCT
CTGTTGCAGGCGGCGCCTTTCTGCTCTGCCACGCCGCCGTCGTTTGCGCG
CCAATTTTTTCCAAAACAAATCTCCTTTCGACTTTTCCAATTCCTTTCCT
TCCCGATCCCCGTTCTTGCCTTGTATTTTGTTCTCGCGAGGTGGGTTCAG
CCGTCCCACCCCGCGTCGCTCCGTCCATCTTCCGTCTCCGGGGCGAATCT
GGTGCTTACTCACAGGCTCCTCTCCTTCCTCCCGCTTTCCGCGGCGGTGC
TCCACTGTACTGTACTGTACTGTACTGTACTGTACTGTACTGTACGCCAG
TGTTGATGCCATGGCCGTTGGTACGAACAGCCTGACTTGTGAATTCGACT
GGCAGTGCACCGCCGATGCCATTGGCTATGCCGTTATGATCACAGCACGC
CTGGACTCCTTACCGTCTCCTCAGTCACTTCTGCGGTTTGGGTCCACCCC
GGCCGGGAGGCAGCCGGGGCGTAGAAGTTATACAGTTGTATTATTAAGTT
GACTGCATCTGTGAACACAAGCGGCGAAATATCGTATTAATAGTCCATCG
ACAGCGATGGAGTGGATTTATTTTTTCGAAGCTCTTTGTGAGCGCGGGGT
GCTCTGCAATGATCTTTGATTGCGCCGCGAGGAATATCTCTATTTTCATA
TTATCTCGATGTTACAATATTTTTCAGATTCGTGCGGTAAGAACGCCGCG
GACCCCGCTCCATTCTTCTATAAGACTAGACTAAGTGTACAGTGTGAGGA
TGAGTTTCGCCCAGATCCAGTATTTTGCTATTGATAGTGTAAGTGTACAG
TGTGACGGTGGATTTCTCCCAGATACAGTATTTTGATGTTGATAGTGTAG
GTGTAACCGAAAGATTCATCATGTGTCATCACGTGCGGTGAAGCATGTCC
AGTACACTGCAGTAGACTTTTAAACTTAACAGCCGATATTCTCAACCAAA
ATACAGTGTCCCCGGACTAACGGTGTGGATAATCGGGAGGTTTGGATGCT
CGGAAGGTTCACATGCGTTCAGATTTTTTCTATGAACCATAGTAAATCAT
GGGCCGTTCTTTCATGCCTTCAAGGGCCGTTATTATGTTATTATGTGGAA
CACCCATATGGGGGGGGGGATCGAGTGTCATTTGCTTACTATACCCAAGC
GTTTCCTGCGGGGGCACCCGACTTCCTCAGTACGTTGTAACGCTGACCTA
AAAAAAGCGATACATGTATGCACTGTATCCCCGGCGTCATTACTCAGCAC
ATTTTCCGGCGTTTTTTTTTTTTTTCGGTAGGTACGTACTGCTGTCGCGG
TGATCGATGCTGCCGGTAGGGCCGTCACGGAAAGCCGGTACATAACGCAA
GCCTGGCAATACTAGTGGGCTATCAGCAATTTTCCCGTTCGTCCGCCGAT
ATATATATATATATATATTGTTGTAGGCGGTCGTCTCCCGGCGTTACCAG
CGAACCCGTGGCGATCATGATAAATGCTTTAGAAAAAATGTAGTCTGCAC
TATCAAGTTACGTCAGAAGTTACGCGAGCAAAACATTGTCAGCTGCATTT
AGTCGGCTTTTAGGTAAAGGATGTACGAGTACCTACCCTTTCCGTGGAGT
CTAACTCTGAGAGAAAAGTGCAGTACAGTAGTTGGGAGGGGTTTCCAGTA
TCTTCTGTTTTATTATTTTAGTATTTTAGTGGGAAACCCCACTCCTAACC
TGGATGCTCGACTATTATTAATATTAGTAATAGTAGTAATAGAGCGACTG
TTATTATTGATATTAATAGTAGTTATAGTACGGGGGTCTTGGCGTGCATC
ATTGTTACAGTAAAAACGCATTTTTCTAGTATGTTTCTACCTCACAGACG
ATGCTCCTTGCCACCGCGCGCACACTGAAAAATACGATCGCATTCGGAAG
AGACATCCTGGAGGTTGGCGTTGGAGGAAACCCCAAAGTGGGCGGCTTCA
GCAACTTGGGGTTCTATCGGCCGGGGCAACGTATAGGTGATCCAGCCATT
ATAGTAATCTGTAAAACGTATAGGTTTTCGAGCATTACTTTACAACGCCA
TGTACTCTCTACGAAACCAAGAGGGCGTTACGAGTTTTGCTCGTCAATCC
TTGACCCCCCCCTCTCGTGGGATGCAATGGAGACCCCCCCCCTAATCTTT
GCCTCGCTACTATTAATACTATAACACAGATCGTCTCGTACGTGCTGGGC
AGCGGTTGACTTTGCCCGACAGGAACAAGAAGCCTTGAAAGATGTCCGCC
GGCATCTTCAGCTCAGTATTGTCAACGATCACATGGCAGTAATTCGCGTA
GCGTAAAATATATATATACAGTAGAAATTCTCCACTTGTAGCCTCTTGAG
ATTCGACCACTCCGATCCGATGGGCACGGAAAATGCTAGGGAGCAAATGT
TCCACCATTGTTTCACCAATGTTTCGCTATCTGTATTGGTTCACCAATGT
TCACCAATGGTTCACCACTGTTTCACCAATGTAAACTTCCCCAATGTTTC
TCCAATGTTTCCCCAATGTTTTTCCAATGTTTCTCCAATGTTTCTCCAAT
ATTTCCCCAATGTTTCCCCAACGTTTCCCCAATGTTTCACCAATGTTTTT
CCAATGTTTCTCCAATGTTTCTCCAATATTTCCCCAATGTTTCCCCAACG
TTTCCCCAATGTTTCACCAATGTTTTTCCAATGTTTCTCCAATGTTTCTC
CAATATTTCCCCAATGTTTCCCCAATGTTTCACCAATGTTTCCCCACTAT
TTCCCCAATGTTTCACCAATGTTTTCCCAATATTTCCCCAGTTTTCTCCA
ATATTTCCCCACTATTTCCCCAATGTTTGCCCAATATTTCACCAATGTTT
TCCCAACATTTCACCAATATTTCACCAATGTTTCTCCAATATTTCACCAA
TGTTTCACCAATGTTTCCCCAATATTTCACCAATGTTTTCCCCGCGGCGG
CTCCAAGCTTTTGTTTCACTCCTGCGCGAGGACCTGTTACAATCATTTCA
GCTCTATTAAATATCTACTGTAGATGAGTGAGGTTGAGAATGTCGATTGC
CGCGGGTTCTTCCGACACACGACTACGCTTTGGAATGCTACCTTTCGACG
ACCGCGTCGACTTTTGTGTGTATCGCCCTTGTCTTGATCCGTGCCGACCT
ATTGACGTCTTGACATCTTAACGTCTTGACCGCAGTTGGCATCGATCCGT
CACTGTCGGAAAAGCCTTCCCTGAACCTTGAATTGGCCGAGAAGAAGGCG
AAGGCGAAGGGTTTGACGTTGCGCGGGGTCGGCGGAGTGGCGGAAGATCT
ACCCTTCGAGTCTGGATCGTTCGACGCAGTCGTCTCGACGCTGGTGTTTT
GCTCTGTCAGGGACCCTGCCGCTGCCCTGCGAGAGGTTTCTTGAAATGAA
ATTGTGTTGAAATTTGAGTAGGTGCTTGTGTTGTGTTGAACCTGCGAGAT
AAATATTCTACCCGTCCTGCTGTAATCCAACACTCAAAACACTCAAAAAA
GGTTCAAAAGACTTGTCTTCCCTTTGTGCTTTTCCGAGGAAGAAGCTGTG
CATGAGCTCTAGATA
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig13:597938..607102+

>mRNA_F-serratus_M_contig13.2199.1 ID=mRNA_F-serratus_M_contig13.2199.1|Name=mRNA_F-serratus_M_contig13.2199.1|organism=Fucus serratus male|type=CDS|length=1578bp|location=Sequence derived from alignment at F-serratus_M_contig13:597938..607102+ (Fucus serratus male)
ATGAGCAACGCGTGCATGCTTCGATCATCGTTAGTGCTTGCCTTATTATT
GATGCAGCGCGATAAAAATGGGGGGGCAACGGCTACATTTCTTGCGACCA
GCAGAACGCCGTGGACTGGTATGTCATGTCTACGTCTTCCGAATTTTCAG
AAAACAGTTGTCTCCACAGTCTCCCGCGCTGGTAAACAACATCGTCGTCT
GTCCCCGTGGATGTTCATGCATGGTCGTCGGGACCGGTCAACGATCGTTG
GCCCGCTGGCCATGAGTGGACCCATGGATGGAGACCCTCACAAGCAATAT
CCTGAAACTGGCACGGCAAGGGACAGCATGTCGACTAGTAGCGTAGGAGG
CATTTCTCGGGAGTACTTCATCGTCGGTGGATCGTTGGGGCTACTCGGGC
TTGGCTACATGCGAGGATTGCAGGATGAACGTGCGTATCGCATTCGGAAG
CGGAACTTGTTTAAGACCATCGCCGGAGACGGGAATGATTTCAGATGAGC
AACGCGTGCATGCTTCGATCATCGTTAGTGCTTGCCTTATTATTGATGCA
GCGCGATAAAAATGGGGGGGCAACGGCTACATTTCTTGCGACCAGCAGAA
CGCCGTGGACTGGTATGTCATGTCTACGTCTTCCGAATTTTCAGAAAACA
GTTGTCTCCACAGTCTCCCGCGCTGGTAAACAACATCGTCGTCTGTCCCC
GTGGATGTTCATGCATGGTCGTCGGGACCGGTCAACGATCGTTGGCCCGC
TGGCCATGAGTGGACCCATGGATGGAGACCCTCACAAGCAATATCCTGAA
ACTGGCACGGCAAGGGACAGCATGTCGACTAGTAGCGTAGGAGGCATTTC
TCGGGAGTACTTCATCGTCGGTGGATCGTTGGGGCTACTCGGGCTTGGCT
ACATGCGAGGATTGCAGGATGAACGTGCGTATCGCATTCGGAAGCGGAAC
TTGTTTAAGACCATCGCCGGAGACGGGAATGATTTCAGAGACATCCTGGA
GGTTGGCGTTGGAGGAAACCCCAAAGTGGGCGGCTTCAGCAACTTGGGGT
TCTATCGGCCGGGGCAACGTATAGAGACATCCTGGAGGTTGGCGTTGGAG
GAAACCCCAAAGTGGGCGGCTTCAGCAACTTGGGGTTCTATCGGCCGGGG
CAACGTATAGTTGGCATCGATCCGTCACTGTCGGAAAAGCCTTCCCTGAA
CCTTGAATTGGCCGAGAAGAAGGCGAAGGCGAAGGGTTTGACGTTGCGCG
GGGTCGGCGGAGTGGCGGAAGATCTACCCTTCGAGTCTGGATCGTTCGAC
GCAGTCGTCTCGACGCTGGTGTTTTGCTCTGTCAGGGACCCTGCCGCTGC
CCTGCGAGAGGTTTCTTGATTGGCATCGATCCGTCACTGTCGGAAAAGCC
TTCCCTGAACCTTGAATTGGCCGAGAAGAAGGCGAAGGCGAAGGGTTTGA
CGTTGCGCGGGGTCGGCGGAGTGGCGGAAGATCTACCCTTCGAGTCTGGA
TCGTTCGACGCAGTCGTCTCGACGCTGGTGTTTTGCTCTGTCAGGGACCC
TGCCGCTGCCCTGCGAGAGGTTTCTTGA
back to top