mRNA_F-serratus_M_contig13.2197.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: D7FYV5_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV5_ECTSI) HSP 1 Score: 460 bits (1183), Expect = 4.350e-160 Identity = 212/276 (76.81%), Postives = 229/276 (82.97%), Query Frame = 1
Query: 247 YLTLPLLWSHRAVHGNAGCTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCSNATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQSALAK 1074
+L L W V GNAGC+LFNWCNGHGTCNT T TCTC EGWGADTD+TLYRAADCSARVCP+GK+WGDVP+G ++AHQEQECS RGLCDRD+G+C CFDGF+GAACERS CP+DCSDHGRCVNMKALA TSDALPLSNVTTY+GE DDTVTWDE+MI+GCVCDS WEVGLG GQTQEPEWFGPDCSLRHCPSGDDP+T D DETDC N TS S Y G GR GNLC VDCSNRG CDY TGLC+CFTGYYG NCG QS LAK
Sbjct: 7 FLLLVSSWIFTTVQGNAGCSLFNWCNGHGTCNTGTRTCTCYEGWGADTDLTLYRAADCSARVCPAGKAWGDVPTGSLSAHQEQECSGRGLCDRDSGECECFDGFTGAACERSGCPDDCSDHGRCVNMKALAVTSDALPLSNVTTYSGE------------DDTVTWDEEMIFGCVCDSKWEVGLGAGQTQEPEWFGPDCSLRHCPSGDDPST-DVDETDCFNVTSSSVYLGTAGRAGNLCHVDCSNRGTCDYATGLCECFTGYYGFNCGQQSVLAK 269
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: A0A8J2X5G2_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X5G2_9STRA) HSP 1 Score: 320 bits (821), Expect = 2.790e-105 Identity = 152/258 (58.91%), Postives = 176/258 (68.22%), Query Frame = 1
Query: 301 CTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCSNATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQSALAK 1074
C N+CNGHG C AT TC C EGWGA TD+ LY+ DCS R CPSG +W DV S TAH ECS +G C++ TG C C GFSG AC+R C DCS HG+CV+MK +AT +ALPLS TYTG E + + WD+D IYGCVCDSSW VGLG GQ QEPEWFGP CSLRHCPSGDDP TT DET+C+ T+ Y +G +GNLCQVDC+NRG CD ETG C C+TG YGH+C L SALA+
Sbjct: 18 CIDMNFCNGHGHCEPATDTCDCYEGWGAKTDVALYKLHDCSGRTCPSGPAWADVASDSKTAHAPAECSGKGTCNKATGTCKCVSGFSGDACQRFGCLYDCSGHGQCVSMKKMATMPNALPLSKPATYTGLETTER------------WDQDRIYGCVCDSSWPVGLGPGQRQEPEWFGPWCSLRHCPSGDDPYTTHVDETNCTGVTAAGGYG--VGEKGNLCQVDCANRGKCDTETGECSCWTGSYGHDCTLLSALAR 261
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: A0A8K1CPX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPX8_PYTOL) HSP 1 Score: 303 bits (775), Expect = 1.270e-98 Identity = 138/244 (56.56%), Postives = 172/244 (70.49%), Query Frame = 1
Query: 319 CNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCSNATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNC 1050
CNGHG CNTAT TCTC EG+GA TD+ +Y+A DCS RVCP+G SWG +P+ AH ECS+ G+CDR +GQC C+ G+ G+AC+RS C N CS HGRCV+M+ +AT + A PLS TY G E DT TWD++ I+GC+CDSSW VGLG+GQ Q+ EWFGPDCSL CP+GDDP T DETDC+ T+ + S +G+ GN C VDC+NRG CDY +G C CF+G+YG NC
Sbjct: 5 CNGHGRCNTATKTCTCFEGYGAATDVAVYKAPDCSQRVCPAGPSWGGIPTDETVAHALAECSDMGVCDRSSGQCKCYRGYEGSACQRSTCLNGCSGHGRCVSMREMATITSAFPLSPAATYEGAE------------DTTTWDQNRIFGCLCDSSWAVGLGSGQRQQSEWFGPDCSLLRCPTGDDPLTA-VDETDCNGKTATDSTS--VGQPGNRCHVDCANRGICDYTSGTCMCFSGFYGSNC 233
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: W4H3P7_9STRA (EGF-like domain-containing protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H3P7_9STRA) HSP 1 Score: 303 bits (775), Expect = 3.780e-98 Identity = 143/267 (53.56%), Postives = 176/267 (65.92%), Query Frame = 1
Query: 265 LWSHRAVHGNAGCTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCSNATSLSAYSG-NLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQS 1062
+WS+ V G+ C N C+GHG CNT T CTC GWG+ +DI+ +AADCS RVCPSG SW +P+ P TAH ECS+ G+CD +G+C CF GF GAAC+R+ CP DCS HG C++M+ALA S ALPLS TTY G+ T TWD+D ++GCVCDS W VGL +GQ Q WFG DCSL+HCP GDDP T DE +C T ++A G +G GN+C ++CSNRG CDY TGLC CF G+YG NCG S
Sbjct: 21 VWSYNPVGGDL-CNALNDCSGHGKCNTLTKVCTCSNGWGSPSDISHNKAADCSRRVCPSGASWNSIPTLPTTAHTAAECSDMGVCDTTSGECKCFPGFVGAACDRTSCPKDCSGHGICMSMRALAGVSAALPLSAPTTYGGQPS------------TTTWDQDRLFGCVCDSPWAVGLASGQVQASGWFGADCSLQHCPYGDDPVTIGTDELNC---TGVAAPGGMGVGASGNVCFIECSNRGVCDYITGLCTCFEGFYGSNCGTMS 271
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: A0A7S1CQ07_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQ07_9STRA) HSP 1 Score: 302 bits (774), Expect = 7.490e-98 Identity = 146/258 (56.59%), Postives = 176/258 (68.22%), Query Frame = 1
Query: 319 CNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPL---SNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDC----SNATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQSALA 1071
CNGHGTCNTAT+ C C +GWG+ +D+T YRA DCS RVCPSG +W D + TAH ECSN G+CDR TG+C CF G+ G AC+RS CPN+CS HG+CV++ +A+ ++A P+ S TY G E A TWDED I+GCVCDSSW V L +G TQEPEWFG DCSLRHC SGDDP TT DETDC N +++ +G G GNLC VDC+NRG C+Y TG+CDCF G+YG C LQS LA
Sbjct: 36 CNGHGTCNTATTQCACYDGWGSSSDVTTYRAPDCSKRVCPSGNAWADAATATNTAHALAECSNAGICDRTTGKCRCFTGYDGEACQRSACPNECSGHGKCVSIAQMASENNAQPVDIESPAFTYGGSEAVA------------TWDEDKIFGCVCDSSWTVSLASGATQEPEWFGADCSLRHCASGDDPMTT-ADETDCVGKVRNGQTVAGRTG--GVAGNLCHVDCANRGICNYNTGICDCFDGFYGVACTLQSELA 278
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: A0A485KUX1_9STRA (Aste57867_11942 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUX1_9STRA) HSP 1 Score: 300 bits (768), Expect = 4.610e-97 Identity = 148/284 (52.11%), Postives = 183/284 (64.44%), Query Frame = 1
Query: 214 QRQLSPSSLIPYLTLPLLWSHRAVHGNAGCTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDS-SWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCSNATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQS 1062
+R+LS + L LP + V G+ C CNGHG CNTAT CTC GWG+ TDI++ + ADCS+RVCPSG SW +P+ TAH ECS+ GLC+ TG+C CF GF GAACER+ CPNDCS HG CV+M+ +A S+A+PLS TTY G T TWD+D ++GCVCD+ SW VGL +GQ Q ++FG DCSL HCPSG+DP TT DE DCSN + + G GN+C V+CSNRG CD+ TGLC CF G+YG NCG S
Sbjct: 6 RRRLSARLVSLLLVLPAARGYNPVGGDL-CNSLGDCNGHGFCNTATKVCTCQNGWGSATDISINKLADCSSRVCPSGPSWSSIPTASDTAHTVTECSDSGLCNTATGECKCFPGFGGAACERATCPNDCSGHGICVSMRNMAMMSNAMPLSPPTTYQGFAL------------TTTWDQDRLFGCVCDAPSWTVGLASGQVQAAQYFGADCSLMHCPSGNDPMTT-ADELDCSNVAAPGGFG--TGASGNICFVECSNRGVCDFTTGLCTCFDGFYGANCGTMS 273
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: A0A835YN50_9STRA (EGF-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YN50_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.660e-95 Identity = 148/270 (54.81%), Postives = 171/270 (63.33%), Query Frame = 1
Query: 298 GCTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLS-NVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDP-----TTTDEDET-----DCSN-ATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQSALA 1071
GC N CNGHG C+ + C C EGWGAD+DI+LY+A DCSARVCPSG +WGDVP+ TAH ECS GLCDRD+G C CF GF G AC+R CPN+CS HGRC+++K + +ALPLS N Y G+E + TWDED I+GCVCDSSW VGL +TQ EWFGPDCSLRHCPSG+DP T E +C AT + G EGNLC VDCS RG CDY TG+C CF GYYG NCG LA
Sbjct: 38 GCDQHNNCNGHGVCSQQDAVCLCYEGWGADSDISLYKAQDCSARVCPSGPAWGDVPTAKYTAHAALECSGMGLCDRDSGVCRCFTGFEGDACQRMACPNNCSGHGRCMSLKNMVNEPNALPLSSNAHEYGGDELAT------------TWDEDRIFGCVCDSSWAVGLKATETQAVEWFGPDCSLRHCPSGNDPAQLQLTPAHPAEKPILTINCEGVATPGVVEKDSEGAEGNLCHVDCSGRGVCDYATGVCQCFNGYYGQNCGTVDVLA 295
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: G5A2N6_PHYSP (EGF-like domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=G5A2N6_PHYSP) HSP 1 Score: 295 bits (754), Expect = 6.200e-95 Identity = 138/271 (50.92%), Postives = 172/271 (63.47%), Query Frame = 1
Query: 259 PLLWSHRAVHGNAGCTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCSNATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQSALA 1071
PL + V C + CN HG C+ T TC C+EG+GA TDIT YR+ DCS R CP+G SWG +P+ T+H + ECS+ G+CDR TG C C+ G+ G+AC+RS CPN CS HG+C++M+ LAT + A PLS TTY G+ + TWD+D I GC+CDS W VGLG G++Q +WFGPDCS HCPSGDDP T EDETDC + G GNLC VDC+NRG CDY +G+C CF G+YG NC S LA
Sbjct: 21 PLARAQLGVPTGNLCAALSNCNAHGRCDALTKTCECNEGYGASTDITNYRSPDCSLRTCPAGPSWGGIPTSATTSHAKAECSDAGVCDRSTGTCMCYYGYEGSACQRSTCPNGCSGHGQCLSMRELATETSAFPLSPATTYGGDVTAT------------TWDQDRIQGCLCDSYWPVGLGAGESQLSQWFGPDCSRMHCPSGDDPMTA-EDETDCEGVVAAGGVG--PGAAGNLCHVDCANRGICDYSSGVCSCFPGFYGSNCASLSPLA 276
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: A0A5D6XZL0_9STRA (EGF-like domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZL0_9STRA) HSP 1 Score: 293 bits (750), Expect = 1.720e-94 Identity = 145/281 (51.60%), Postives = 179/281 (63.70%), Query Frame = 1
Query: 208 MTQRQLSPSSLIPYLTLPLLWSHRAVHGNAGCTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCSNATSLSAYSGNLGREGNLCQVDCSNRGACDYETGLCDCFTGYYGHNC 1050
+++R L P+S L +P GN C+ + CNGHG C TA+ TC C EG+GA +DIT Y++ DCS RVCPSG SW +P+ +AH ECS+ G CDR +GQC CF G+ GAAC+R CPN CS HG+CV+M+A+A ++A PLS TTY G E T TWD++ I+GCVCDSSW+VGL GQ Q +WFG DCSL CPSGDDP TT DETDC L+ G GN C +DCSNRG CDY TG C CF+G+YG NC
Sbjct: 2 LSRRLLRPASAEASLGVP--------SGNL-CSALSNCNGHGRCVTASKTCICFEGYGATSDITSYKSPDCSKRVCPSGPSWAGIPTAANSAHPRTECSDAGYCDRSSGQCRCFAGYDGAACQRYACPNGCSGHGQCVSMQAMAELTNAAPLSAATTYAGAEA------------TTTWDQNRIFGCVCDSSWDVGLAAGQRQSSQWFGADCSLMRCPSGDDPMTT-VDETDCGGK--LAPGGVGTGETGNKCHIDCSNRGKCDYTTGTCACFSGFYGSNC 258
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Match: A0A5A8D842_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D842_CAFRO) HSP 1 Score: 293 bits (749), Expect = 6.410e-94 Identity = 143/284 (50.35%), Postives = 174/284 (61.27%), Query Frame = 1
Query: 295 AGCTLFNWCNGHGTCNTATSTCTCDEGWGADTDITLYRAADCSARVCPSGKSWGDVPSGPMTAHQEQECSNRGLCDRDTGQCSCFDGFSGAACERSPCPNDCSDHGRCVNMKALATTSDALPLSNVTTYTGEEQSAKDTHIRREDDTVTWDEDMIYGCVCDSSWEVGLGTGQTQEPEWFGPDCSLRHCPSGDDPTTTDEDETDCS--------------------NATSLSAYSGNLGRE----GNLCQVDCSNRGACDYETGLCDCFTGYYGHNCGLQSALAK 1074
+ C N CN HGTC+ C C +G+G+++D+ +Y+A DCS RVCP+ K+W D+P+G TAH ECSN G+CDR TG+C CF GF G AC+RS CPN CS HG+CV+M +A ++A P+ TTY G E TVTWDE+ I+GCVCDS W VG G GQTQ WFG DCS R CPSGDD +T DETDCS A + +G LG + GN C VDCSNRG CD +GLC CF GYYG NCGL+SALAK
Sbjct: 20 SACAHLNNCNSHGTCDETNRVCRCFDGFGSESDLAVYKAPDCSQRVCPADKAWVDIPTGATTAHNNAECSNAGICDRGTGRCRCFAGFEGDACQRSSCPNGCSGHGKCVSMSQMAGEANAFPVGPATTYGGFES------------TVTWDENKIFGCVCDSIWTVGFGAGQTQATSWFGADCSQRRCPSGDDASTELRDETDCSYYTDNGETWHGAVLSDGTPDRANPGTGVTGTLGVDFGAVGNKCHVDCSNRGICDRTSGLCKCFRGYYGQNCGLRSALAK 291 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2197.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig13.2197.1 >prot_F-serratus_M_contig13.2197.1 ID=prot_F-serratus_M_contig13.2197.1|Name=mRNA_F-serratus_M_contig13.2197.1|organism=Fucus serratus male|type=polypeptide|length=290bp MTQRQLSPSSLIPYLTLPLLWSHRAVHGNAGCTLFNWCNGHGTCNTATSTback to top mRNA from alignment at F-serratus_M_contig13:549598..553350- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig13.2197.1 ID=mRNA_F-serratus_M_contig13.2197.1|Name=mRNA_F-serratus_M_contig13.2197.1|organism=Fucus serratus male|type=mRNA|length=3753bp|location=Sequence derived from alignment at F-serratus_M_contig13:549598..553350- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig13:549598..553350- >mRNA_F-serratus_M_contig13.2197.1 ID=mRNA_F-serratus_M_contig13.2197.1|Name=mRNA_F-serratus_M_contig13.2197.1|organism=Fucus serratus male|type=CDS|length=1740bp|location=Sequence derived from alignment at F-serratus_M_contig13:549598..553350- (Fucus serratus male)back to top |