prot_F-serratus_M_contig13.2195.1 (polypeptide) Fucus serratus male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_F-serratus_M_contig13.2195.1
Unique Nameprot_F-serratus_M_contig13.2195.1
Typepolypeptide
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Sequence length197
Homology
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BLAST of mRNA_F-serratus_M_contig13.2195.1 vs. uniprot
Match: D7FYV4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV4_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 1.330e-15
Identity = 46/83 (55.42%), Postives = 55/83 (66.27%), Query Frame = 0 
Query:  117 LFSYMMPPLAAVVHQARQDTP-DLRVFELQESPCLQGAGIALAVEG--DASLLAKHGPLPSRSYVILVNPRRRRVGKHSAEGG 196
            LF ++  P      + R D     RV ELQE+PCLQG+GI +AVEG   ASLLAKHGPLP RSY+ LV PR RRVG  + +GG
Sbjct:   40 LFVHVASPGGCGASRPRPDAGRQARVLELQENPCLQGSGIVIAVEGPCSASLLAKHGPLPDRSYICLVRPRSRRVGSANEKGG 122
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2195.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FYV4_ECTSI1.330e-1555.42Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Fucus serratus MALE
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029006ADF-H/Gelsolin-like domain superfamilyGENE3D3.40.20.10coord: 14..141
e-value: 3.1E-8
score: 35.2
NoneNo IPR availableSUPERFAMILY55753Actin depolymerizing proteinscoord: 18..122

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:539160..540700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Fucus serratus MALE2022-09-29
Diamond blastp: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-16
OGS1.0 of Fucus serratus male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2195.1mRNA_F-serratus_M_contig13.2195.1Fucus serratus malemRNAF-serratus_M_contig13 539160..540700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_F-serratus_M_contig13.2195.1 ID=prot_F-serratus_M_contig13.2195.1|Name=mRNA_F-serratus_M_contig13.2195.1|organism=Fucus serratus male|type=polypeptide|length=197bp
MIAIATGDGAPALAQQLIEVEHGRLGVLYSTDAYLFHFRIQPTRSEGGGE
ERETWKEGEEFHLAYIWLGREAGAGARASVRAQGKRLLERLPRSTPPAPV
APLEVEQGSEPALFLGLFSYMMPPLAAVVHQARQDTPDLRVFELQESPCL
QGAGIALAVEGDASLLAKHGPLPSRSYVILVNPRRRRVGKHSAEGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029006ADF-H/Gelsolin-like_dom_sf