mRNA_F-serratus_M_contig13.2185.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig13.2185.1
Unique NamemRNA_F-serratus_M_contig13.2185.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig13.2185.1 vs. uniprot
Match: A0A6H5KA41_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KA41_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 2.030e-50
Identity = 120/287 (41.81%), Postives = 164/287 (57.14%), Query Frame = 1
Query:  505 GKTVVT-----KAIRAFGLALAWYFASSVAAFAVSGATG--LPYQPRPRRRIPIAPTIFLLYLMSDKKMKTRNRFAGVVPQDDQSRRRLADDAYDMALSWGKPAGRIALLAVDTFFFLIIFRFSGYDFSKLLAGRGMEQLRSLEFWIPYGAAATLGAAGVTRIIRRFGHGYLRSTIATLLAPIIRTVIIKPAKTVASLFGAGGDWDLGISDEERAVRRASSRQLRESLSTFQDVNFSDGDHDDG----SGSVAPPLGPGSSDGGNDSDEGEEGGGQDGDAPPSLKRT 1332
            GK VV      K I++ G+ALAWY ASS  A A + ATG     +P+PR R    P + + Y +S   +K R R  GVVP+D +S + LADDA D+A+SWGKPAG +A  +VD   F  + R+ G+ F +L++ + +  L++ +FW+    A   G A VT   RR G GYLRS  A+ L+P +  ++++PAK VAS+ G G  WDLG++DE+R  RR S  +LR SLSTF+D +F    H DG    SG  A P  P                G D  APP LKR+
Sbjct:   97 GKAVVAPGRAKKVIKSAGVALAWYLASSAVALAATAATGGAARARPQPRMRYTGLPILLMAYALSRGDLKERTRLEGVVPRDPESIKLLADDAEDLAMSWGKPAGLMAYTSVDCIVFFFLSRWVGFPFKELVSAQRIAHLQTPDFWVATTLAGAFGFAIVTWT-RRVGQGYLRSVCASALSPAMHRLLVRPAKAVASVAGMGDGWDLGLTDEQRKARRPSI-ELRRSLSTFKDPDF----HGDGGIGDSGGAAFPQAPSP----------PPAAGVDDGAPPDLKRS 367          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2185.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KA41_9PHAE2.030e-5041.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig13contigF-serratus_M_contig13:347202..358236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Hectar predicted targeting categorysignal peptide
Ec32 ortholog descriptionexpressed unknown protein
Ec32 orthologEc-19_003190.1
Exons7
Model size2358
Cds size1164
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929242.067414-UTR-F-serratus_M_contig13:347201..3482211622929242.067414-UTR-F-serratus_M_contig13:347201..348221Fucus serratus maleUTRF-serratus_M_contig13 347202..348221 -
1690962765.6450534-UTR-F-serratus_M_contig13:347201..3482211690962765.6450534-UTR-F-serratus_M_contig13:347201..348221Fucus serratus maleUTRF-serratus_M_contig13 347202..348221 -
1622929242.7328873-UTR-F-serratus_M_contig13:358062..3582361622929242.7328873-UTR-F-serratus_M_contig13:358062..358236Fucus serratus maleUTRF-serratus_M_contig13 358063..358236 -
1690962765.7338145-UTR-F-serratus_M_contig13:358062..3582361690962765.7338145-UTR-F-serratus_M_contig13:358062..358236Fucus serratus maleUTRF-serratus_M_contig13 358063..358236 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929242.0818915-CDS-F-serratus_M_contig13:348221..3484971622929242.0818915-CDS-F-serratus_M_contig13:348221..348497Fucus serratus maleCDSF-serratus_M_contig13 348222..348497 -
1690962765.6561122-CDS-F-serratus_M_contig13:348221..3484971690962765.6561122-CDS-F-serratus_M_contig13:348221..348497Fucus serratus maleCDSF-serratus_M_contig13 348222..348497 -
1622929242.0961423-CDS-F-serratus_M_contig13:349363..3494481622929242.0961423-CDS-F-serratus_M_contig13:349363..349448Fucus serratus maleCDSF-serratus_M_contig13 349364..349448 -
1690962765.6664433-CDS-F-serratus_M_contig13:349363..3494481690962765.6664433-CDS-F-serratus_M_contig13:349363..349448Fucus serratus maleCDSF-serratus_M_contig13 349364..349448 -
1622929242.1090286-CDS-F-serratus_M_contig13:349921..3499781622929242.1090286-CDS-F-serratus_M_contig13:349921..349978Fucus serratus maleCDSF-serratus_M_contig13 349922..349978 -
1690962765.6766567-CDS-F-serratus_M_contig13:349921..3499781690962765.6766567-CDS-F-serratus_M_contig13:349921..349978Fucus serratus maleCDSF-serratus_M_contig13 349922..349978 -
1622929242.1192718-CDS-F-serratus_M_contig13:350322..3503941622929242.1192718-CDS-F-serratus_M_contig13:350322..350394Fucus serratus maleCDSF-serratus_M_contig13 350323..350394 -
1690962765.6865633-CDS-F-serratus_M_contig13:350322..3503941690962765.6865633-CDS-F-serratus_M_contig13:350322..350394Fucus serratus maleCDSF-serratus_M_contig13 350323..350394 -
1622929242.1310422-CDS-F-serratus_M_contig13:351110..3512541622929242.1310422-CDS-F-serratus_M_contig13:351110..351254Fucus serratus maleCDSF-serratus_M_contig13 351111..351254 -
1690962765.6995413-CDS-F-serratus_M_contig13:351110..3512541690962765.6995413-CDS-F-serratus_M_contig13:351110..351254Fucus serratus maleCDSF-serratus_M_contig13 351111..351254 -
1622929242.1422067-CDS-F-serratus_M_contig13:352003..3521821622929242.1422067-CDS-F-serratus_M_contig13:352003..352182Fucus serratus maleCDSF-serratus_M_contig13 352004..352182 -
1690962765.7089229-CDS-F-serratus_M_contig13:352003..3521821690962765.7089229-CDS-F-serratus_M_contig13:352003..352182Fucus serratus maleCDSF-serratus_M_contig13 352004..352182 -
1622929242.4400444-CDS-F-serratus_M_contig13:357711..3580621622929242.4400444-CDS-F-serratus_M_contig13:357711..358062Fucus serratus maleCDSF-serratus_M_contig13 357712..358062 -
1690962765.7231605-CDS-F-serratus_M_contig13:357711..3580621690962765.7231605-CDS-F-serratus_M_contig13:357711..358062Fucus serratus maleCDSF-serratus_M_contig13 357712..358062 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig13.2185.1prot_F-serratus_M_contig13.2185.1Fucus serratus malepolypeptideF-serratus_M_contig13 348222..358062 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig13.2185.1

>prot_F-serratus_M_contig13.2185.1 ID=prot_F-serratus_M_contig13.2185.1|Name=mRNA_F-serratus_M_contig13.2185.1|organism=Fucus serratus male|type=polypeptide|length=388bp
MTMKAAALSLAVLVVAGTLGTTTSFTAKPSSCRARHTCLSVHSASSSAAP
AVWRWASRARHGSCEVIPPPPALEDGPSCLEFASRGRANAYAPHAALKIV
EGSIEPQSLLGKTVVTKAIRAFGLALAWYFASSVAAFAVSGATGLPYQPR
PRRRIPIAPTIFLLYLMSDKKMKTRNRFAGVVPQDDQSRRRLADDAYDMA
LSWGKPAGRIALLAVDTFFFLIIFRFSGYDFSKLLAGRGMEQLRSLEFWI
PYGAAATLGAAGVTRIIRRFGHGYLRSTIATLLAPIIRTVIIKPAKTVAS
LFGAGGDWDLGISDEERAVRRASSRQLRESLSTFQDVNFSDGDHDDGSGS
VAPPLGPGSSDGGNDSDEGEEGGGQDGDAPPSLKRTV*
back to top

mRNA from alignment at F-serratus_M_contig13:347202..358236-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig13.2185.1 ID=mRNA_F-serratus_M_contig13.2185.1|Name=mRNA_F-serratus_M_contig13.2185.1|organism=Fucus serratus male|type=mRNA|length=11035bp|location=Sequence derived from alignment at F-serratus_M_contig13:347202..358236- (Fucus serratus male)
GACAAAGTGAAGAGAGCCGGTTTCGCGAGCTCCACAGGCACCCTTTGGCT TCCCGACGGCCCAGCCATAAGCGATCACCGTAACTAGCCAGTGGAGGCGG AAAGAGAGAACAAATCCAGGAAGTGTAGCTCGATCAAAAACTAAAGCGGA GGACGGGAACAAGTGGTAGGAAACATGACGATGAAAGCAGCAGCTCTTTC GTTAGCTGTCCTCGTGGTTGCAGGGACGCTGGGCACGACGACCTCCTTCA CCGCGAAGCCTTCGTCGTGTCGGGCACGTCATACATGCCTGTCGGTGCAC TCTGCGTCTTCTTCAGCGGCGCCTGCTGTGTGGCGTTGGGCTTCCCGCGC GAGGCATGGGTCGTGCGAGGTTATTCCGCCGCCTCCGGCGCTGGAGGACG GTCCGTCGTGCCTGGAGTTTGCAAGCAGAGGCAGAGCTAACGCTTATGCT CCGCATGCCGCCCTCAAGATTGTAGAGGGTAGCATCGAGCCTCAATCTCT ACTGGGAAAAACGGTCGTAACGAAGGTACAGCATCGTCTGTTTGAAGAAA ATACAGAACGCACCTAGACCTTCTGAGCACGTCTGTTGTTTTTTCGTACA TTGAACGTTTATTTTCACTCCCTACCGATACTGTTGTAGTGCTTTTGTAC CTGCTCTCTCTTCAGCTCTAGTCTACAGCAGTAGGATAGTCTGGTACAAA CAGCGGTATCTGTGTTGAACTTTTGGTACTGCTGTAGACTATTGTTTGTA TTTATAGTCTAGTCATCACATACTCTGTATAGCAAGACTGCTGCTCTTCA ATTTTCAGGTGAATACTGCTTTTTCGACTCTCTGGATTGTGTTGAAGATA TCCGCTTCATGGTCCTCTTGCCCCTGTCTGCACTCTTAGCCAAATATCAT ACTTCACAGGAAATTATACTGTACCTTGTAGGTATCTATGACTACTACTA AAAACTGTTTTTTATCATACTACGCACCTATAAACTGTACACAATCATAA TGTAGAATTTGACCTCACCTAAATGTCGACGTACCCAAAGACCCAAGGGA GCTCTGACTTGTAATATATATCTCAGTACCTCTATCCCCCCGTATGACAC TGCTGGCCCTAGTTGTAATATCCTAAGGGCTATCCTGATTTTTCTTTAAA AGACTTCTAACTTTTCTTTAACCTAAAGTTCCCCGTCTCTTATATAGATA ACCCTGCATGATAAATAATGGAAAGTTAAAGTATACTAATATAGATGGCA ATTAAAGGTAGGACGAAGTATACGAATAAACCTCTCCCATTCATGTTCAT GTGAATACTGCTCTTTCTACTCTCTGGATTATGTTGAAGCCAAAAATCAT ACTTCACCTGCAATTATACTGTACCTCGTAGGTATCTACGACTACTACTA AAACTGTATTGCCTTTGATCATACTATGTACCTACTCCTTCCTCTTGAGT ATAAATTATATACAATAAATTATATACAATGACAATCATGTAGAAGGTGA CCTCACCTAAATGTCTATGTACCCAGAAGACCCAATGGTGCTCTGATTTG TAATATATACCTCAGTACCTCTATCCTCCTCTATGACACTGCTGGCCTTG GAGTAATATCCCAGGTGGTTGTTCTGAGTTGACTTTTCTTTAACCTAAAG TTCCCCGTCTCTTACATAGATAACCTTGCATGATAAACAAGGGAAAGGTA AAGTATACTAACATAGATGGCAATTATTGGTAGGACGCAGTACACTAATG AACCTCTCCCATTCTACTAGTATTGCTTGATTATTGATTGGTGAATAAGA TATGACCACTAATTACACCCACCCGAGCCTAGATAATTAAGTGTAACCTA AGCTCCCTGTCTACCCCAAACTGAAATGGTATATTCATCAAAAACCTTAT ATCCCTACGTCGAATGTACAAAATTACTATTAATAATACCATTTGGAGGT AGTACTACTCTGTCTCTGGTTTTTGTCTAATGCTTTTATGGTGTCCCTGC ATGGAGATTAATGTAAATGTACAGTATAACGGTGGGTTTCTCCCCGACAT TATATTGTTGACCCAATGTTATCTACATTGGGGAACCTGTTTAATACCAT GAAGAGGTTTTTGTCACTGCAGCCTTTGACCCCGCCTAAACGTTTTGACA TTTCCTCCCCCTACGGGGGATGCTCAAAAAGTCTAGGTGCTGTTTGGATT TTTCTTTAAAAAGAGTATGGATCAACCGTGCTCGTGGTCAACTCAACAGG GAAAATAATATTCCCCTGTCCCCGTGCGTGCCTGAGATTTTGGTCTCGCG AGACAGGTTCAGCTGTCCCGTCCCGTGTCAGCCTGCTCATCTCCATACTC AGGCTGAATCTGGTGCTTACTTACGGGATTCCTCCCGAGTTCCGCGGCGG CGTCCATTTATGAATGTCTACAAAGCACAAAAGTACCATCCGTGTTGAAC TTTTGAGGTGACCTACAAGTATTATTATCCAACGTGCAAGTACCGGTACG GATCGCCCAAGAGCTAATCGTATACATTCTAGAACAGAAAACTCCGTATC TGGCTTGTCATGCTTCATCTGTCGTCTGATGCCATAAGTTTGTAGTACAG TTGCTTACGTTTGTCGGCGGAGCGGAATAGACTAGATACCGGCAGTGGAT AACCTCGCAGCTCAAGGCGTAGCAGGATCAATTGCTTTACTCTGGTTTCC GTTTCCGTAGCGAAAAGCGCGAGAAGGTGAGGAGGTATGCAGCAGGGCAT GGATAAACCGGTATATGGTTGCCAAGCCTTCTCGTGGTCAAATGATCAGG GAAAATATTATTTCCCTGTTCCCCATACCCGCCTGAGAATGTGGCCTCGC GAGACGGGTTCGCCCGTCCCGTCCCGCGGCAGCCTGCTCATCTCCATACT CAGGCTGGATCTGGTCCTTACTCACGGGCTCTACTTACGGTTCTTGTTTT GCGACGGCGTCCATTCATACCGTCAACCGCCATCGGATCAGTCCCGCGTT TTTTGCGTGGCGCAATTGCGTACCGATGGCGTTTACCGCCGAGAGCCGCC GGCTCAAGGCCGGCAGTCCTCAAGGTACAGTAGCGTGAGGAACGGATGCA GCTTATTGATTAGGGAAACTCCATGGGCCAATATTCGTGGGCAACTGGTT TCCTACACCCACTTTGGTACAGTTTTTGTTCGTATTTCACTTATGGCCGA TGGGCCTCGACGTGCCAGGTTCCCAATCCCACCTACGCCGATACTTTCAA CACGCCCACTTCGTACCACTAGTGGGTGTGGGAGAAAGAGGCGCATATTA ATTGGTCCATAGTGACCTGCCAAGGCAGCGCTCGTTCGGAACCACCTTGA GGTTTACTGGCCCTGTGCCGGTGGACTCTCGGCAGTGAACGCCATCGGTA CGCAATTACGTGACCCGATAAACTCGGGACTCACCCGATGGTGTATGGCG GTTTCATAAATGGACGCCGCCGCGGAACTCAGGAGGAATTCCGTGAGCAC CAGATTCACCCTGAGTATGGAAATGAGCAGGCTGACGCGGGACGGGGCTG CCGAACCCGTCTCGCGAGACCAAATTCTCAGCGGGAACGGGTACAGAGAA ATATCATTTTTCCCTGTTCGGCTGACCACGAGCAGGATTGGCAACCTTAC CCGGTTGATCCATACGCTGCTATATGTGATGACCATACATACATAAATAC ACACATACATACTGCAAAGTTGCCATCCTGCCTGTGGTCAGTAAGGATAT TCCTACCTCCCCCCGGTCCTCGCCTTACGAATTTTTATCGCAATGCATGT TCAGCACTCTTCCAAGTCGTCAACCGATGGTTGAATTTTACTTAAATCAC GTTCTCACGCTTTCCGCTACGGATGTCATAATAAAAATCCTGCTTTGACA AGAATCAAACTCACGACTTCCGCACTAGCAGGTGTGCGAGTTTACCTTTT AGACCACTTGGGCGACGACAATGTGCGATACAAGTAGCTTGTATCGGAGG CGTTATCGTTGGTTGACGAGGCGTAAGAGTGCTGAACTTGCATCGCGATG AAAAATCTGAGGCGAGAACCGGGGAGAGATGATAAAATTTTAAAGTGATC ACAGGCAGGACGGCAATTTCTCAGTATGTATGGTCATAGTCCTCACACAT ATTGCAAGAGTGAGGACCAACCGGGTAAGGTTGCCAATCCTGCTCGTGGT CAGCTGAACAGGGAAAAAATATATTTCTCTGTCCCCGTTCCCGCCTGAGA ATTTGGTCTTGTGAGACGGGTTCGGCAGTCCCGTCCCGTCAGCCTGCTCA TCCCCATACTCAGGCTGAATATGGTGTTTTTTTGTTTGTTTTTTTGTTTT TGTTTTTTTAAATCACACTTAAAGCCGATGGACCTCTAATTACCATCCTG CCTGTGGTCACAAAGGATCTTCCCATCTCTCCCCGGTTCACGCCTTACAA TTTTTATCGCGATGCAAGTTCAGCACTCTTACAACTCGTCAACCAATGGT TGAATTTTACTTACTCACGTTTCCACGCTTTCCGTTACGAAAGAAAGAAC ACAAATTCTGATTAAGCTAAGAATCGAACTCACGACTTCCGCACTAGCAG GTATGCAGGTTACCTACTAGACCACTCGGGCGACGAATGCTTACTTACGG GATTCCTCCTGAGTTCCGCGGCGGCGTCCATTTATTTATATAAAACCGTC ATACGCCATGGGGTCAGTCCCGTGTTTATCGGGTCACGCAATTGCGTATC GATGGCGTTCACTGCCGAGAGTCCGCTGACACAGGACCAATACACCTCGA GGTAGTTCTAAACGGGTGCTGCCTTGGCAGGTCACCATTGACCAATTAAT ATGCGCCTCTCTTTCCCACACCCACTATTGGTATGAAGTGGGCATGTTGG GAGTACCGACGGTAGGTGAAGTTGGTAGCCTAGCACGTTGAGGCATGTCG TCGGTAATCGAGATACAAAAAACTAAATTATGTTAAGAGTACTGTATGTA GGATCCACCAACCTCTCCCCGGTACATTCCATCTCCAGTATCTCCTATAG TGCTCGTACTTTTTTTTTAGGAGGGATCCAAAAATAAAATGCCCCAAACA TCGTAAATGTTTCACTGTCGTTTTTGTCTCCCATAAAGGTTGGCCTAAGA GGTGGCAACACTCGGTGACGCAATATTTCTGAAAATACAAGAGCTGGTTC CGGTATCAACTATTACGAATAGTACAGAAGGTACTGCGGTATTTAAGTAC TGTACTATGTACTTCTCCAGCTCTTGGAATTGACACCGTTCGTGTTCCAA GCTCAGGTATGCTTGACCTCATTTGGGGGAATAGGCCTTGTATTTTTCTA TATTTAAATCAAGTAGTTTGTGATCAAGAGGCGCCATACCCGGAGTGTTT CGCTCATAATGACGGGAAAATGACGCCGCCTTGTATATTTGATATTTTTC ACTATCGAGCACCTCCCCCCCCCCCACCCCAAAAAGAAATAATAATTTTG CGCTAGTTTTACTCGTATTTAGAGAAAGCGCAAGGCATGTCCTGCCTCCC TTTCAAGGCCAAATAGTTTTACTCGTAACGAAACCCAAACTTTTTGGTCA CTAAGAGTGGTCCTGCTGGGGCTTTTTGCAACACAGGACAGGTCAAGACT TGGCCTCTGCGGCCAGCGTTTGACACCCGAACGGCCCGAAACTCGGCGAG AAATCGCGTCATACTAGGCGGTAGCACATGCTGCTTGCATCGACATGGTG CAGGAGGACCCCTTCGTACCTACCATATATGATTGCCGAAATCGTCTCGC GAGACCAAATTCTCAGGCACGAACGCGGACAGGGGAATATTATTTCCCTG TTCAGCTGACCACGAGCAGGATTGGGTACCTTACCCGGTTAATCTATACT CTTGCTATACGTGTGCCCATACATGTCAACAAACAATCAACACCCTTCCC ACGGAAAACGACGCAACAGCTACTGCTGAAAGTAATCCGTAAGCCTCACA CGGCGCCTCTTCAAGCAGTATCCGTATATTGTCGCGCATTCGCTGGATCC CCAGGCAATAAGGGCTTTCGGGCTAGCGCTGGCGTGGTACTTCGCTTCGT CGGTGGCCGCTTTCGCTGTCTCCGGCGCTACTGGGCTACCTTACCAGCCT CGTCCTCGGCGACGGATACCGATCGCACCCACCATTTTTCTCCTGTACCT GATGAGCGACAAGAAGATGAAAACGAGGAACAGGTGAGATGATCCATCGT TCTTGTGTGTGGCTGTGCCTTGTGTCTTGTGTCTGATGCCTGTGTCTGTG CCTTGTGTCTTGTCTTGTGTCTGTGTCTGTGTCTGTGCACCCGCGCCGTT GCTGGCATATGATCGTTCATCGTTAAGATACAGCGAGCGCAAGGTTGTGG CTGAGAAGCATTTTCCCTCTTCGCTTTCAGTGGTACAATCGAAAGATGCC GATGCCGGTGTAACACGCAAGGTTGGGGAATACTATCGGTACGTCACCCG CCGGCAGGGGCGTCCATGAACCCCCCCCCCCCCCCCCCGAAGCTCCCTGC CAAACGCAAGCGAGCAGTCGAGTTCGACAGTGTCCCCAAGGGGAATATAA TGTTCTCGAGCCACCGAATTTAGTTCGCGTCGGGCGCAGACCACAAAAAG CTCGGTGAGCTATTAATGTCTGCTAGTCTGGCAAGGGTATCGCCTTCGCG GCGGGATCCTTCGCCCCGCCCCTTCAGCTGCCTTCCGCGCTTGTCTGGTT TTGGTGCCAAACGATTAATTAAAAGAGTACAGTACAGTACATTCTCTCCT GAAACCCTTCCACGCGGTGTCCATGGACATCCTGGATACAAGCACACCAA CTCTTGTGAGTGCGACGGGTCAAACCGCGCGGAGTCTCTTGCTACCCATC CTACACGTACACGCGTTGCCGACCATCGCAGCGCGGTTTCTTGCGCGCGT ACCGTGCACTTATTTTTTACCGCCGCGTGCAGGTTCGCCGGCGTGGTGCC ACAAGACGACCAGTCGCGACGGCGGCTGGCGGACGACGCGTACGACATGG CCCTCTCCTGGGGAAAGCCCGCGGGCAGGATCGCGCTCCTCGCCGTGGAC ACATTCTTTTTCCTAATCATTTTCAGGTGAGAACGACGGAGGTCTCCGTT AAGTGAGAAAGGTACTTCTATTCATTATTATCTTGCCACTTGCGACAGAG GAGCGAAAAAGGATATCGCCAATACCCTCCGGAGGCGTAGTAAAATATCC TCTTTTTCGCGTTTTTTTTTCGCCGTCCGAGCAAGAACAGCGAGGGAATT CGGTTCGGCTTCATCCATGGTTGGGTGCGAATGTGAGATTCGTTCAACGG ATGGGGGGAGGGGGATTTGAAGATCTCGTCCCTGGAAATGTCACCGAAAC ACCCCTTTCCGGGGATGGGACTGCATGATCCCCTATATGATAGGCAAGAT TGCCCCGAACTGAACTCATCACTCGATGGGTTTGGTAATATCTGACTCCG GGAGGGGCTTTTTCCGTAGCGTCCCTCCTGAACTCGGGGACATTGTTGTT GTCCCCCCCCCCCATTTCAATTTCTCGTGGGGTTTGTTTTGCTACACAAT GTTGTCGCCGGCTGCTTAGGTGAGAGCAGTGCCACAACACATATGGGGGG GGGATCATAAAATTAGCCACTCGACTGATAATTTCATTCCGGTATGACCA CCTGTTGCTGTTCCCTTAAACATCCCAGCTTACGCGCGAAATAGTATCCA AATCATGCCTACGAATGGGCTGTTGTTGCACGCGCCCAAACAATATTTGC GTTTCGTTGACGTTCGACGAAATCGTTTGCCCTCGGGAAAAGGTTCTCGG GATACGACTTCTCGAAGCTTTTGGCGGGGCGGGGAATGGAGCAGCTCAGG TCCCTCGAGTTCTGGTGAGTCCCTCTCGATGAGAACCATTACTGGAACCA TGCACGCACACGATTTGTTCGCAATTGGCTGTGATTGGTGCCCGCTAGCG TGTGCGGAAGGCGCTTCACGGTTTCACCCATTGTACAGTATCTTTCTCCA CGAAAAAAGCCTGATGTTTAAACGTTTCAACACCATGTTTGTACAGCCAT GAAGATGCCTCCCGCTACCCCTCGCTCCGTACATGATCAAGCCGCGCGCT TGGAGCCAGCCATTCATCGATTTCGCGTTTGACCTGATGCGTATAGTATA AACTATGAAAAAGCTCTCTTTTGTCAAAGGGGATTCTCATTTTATTTTTC ATGTGCAGGATACCATATGGCGCGGCGGCCACGCTTGGGGCAGCAGGGGT CACCAGGATCATTCGGTGCGTGCCCGCACTAAAAGCCTTCTTTATGCATT ATATTGTGTGTATGTATGTATGTGTTTCAAGTGGCCTTTCCAAGGGTTGT GCCTCGCCATGGGCAGGGAGGAGGCAGACGCGGGAGGCGGGCGTTCCGAA GTATTTGCCGGTGGTTTTAGAAAAGAAAAAGAAGGGAAAAAGATTGAGAG AGTCTCACTAATGATTGGATTCGATTTTGATCGACTGACGTTGCGGGAGG TCGTCGACGCTGGGCCGATTTTCAACTGTAATGGTTTTGTGTTGTTTTGA TCACAGTGCATGCTTCTTGAGGATCTTCCCTGCTTGTTTTGTTCAACCTA TGCATGGCGCTCGAGTATGATGTTTTTGGGAAAATGTCTTCCTCTGCCGT ACGCCCTCATCTGCTTGTGGGTTTCCTCCCGTGGGCGTGGATGCGCTGAC GCGGAAACTTGAATGTTTCGAAACGCCCCGAGCTGCAGGAGGTTCGGTCA CGGCTACCTTCGAAGCACAATCGCGACGCTGCTGGCCCCAATAATTCGGA CCGTTATCATTAAGCCTGCCAAGGTGAGAGAACTCCTGCTTCATGCAGAT TTATCTTATTTTGCTTGACAAGTTCTATAATACAAAGCATTGGACAGGAA TAAATTTTAGCCCTTCTGAGCAAAGGAGCCCATTTTTTTTATCACAGCGA CCAACTGTATTCGACTTAAAGTGGAAATTGAATTACTGCACATCAAGCAC GCAGCAGTACGCCATAAGCGCGACGCAACAGAGTGGCTTGAATAGCGTTC GCGCACCCCGCCAGCATTTTGAGGAGCATGGGGCAGGACGTCGGTTGAGC GGCAGCGGCTCTGTTGGCACACCCTCTCCGGCGAATCGAAGCAATCAGGG ACCTGGCCCATTACCTGTAGCAGTAGGGCGGAAGTGCTGTACAAAGGAGT GCGTAGTTCTTCGATTTAAGTTGTTTCGCGCACTTGAGGGTATCGTGGGT ACCTTAGAGGTCTTGCCGATACAGTAGTACTGCATAGATCTATAGCAGTG TAAGGCGGCCAATTCCGCCTGTGAGGACACGCGCACGTGATAGCCGACGC CTAAAACAGCTGACACGGACTTGTCTCGTTCGAACTGGTCATTTCTCTCA CCACCAGCACGCTCTATAGCCCCAAGCAGCGCTGTCGACGCGCGGTATCT CTATAATAGATCACACCACAACCTCTTTTTTGCGCCTTTCTTGCACTGTC GACGACCGCCGACGTCGAAAAAATGGCACAAAAAGAGAGAAAGACAACTG AAAGTGCGTTACGCCTCTGGTGCTTACTTCACCTCACGTCACGTCGTATC ACCGTTCCCATCCGCGCGCTCCGGGCAATGGCGCGTGTGATGACCACTGG AATTTCCGATTTTTAACTGGGCGTCGGACATTTTCCTAGACGGTCGCGTC CCTCTTCGGTGCCGGCGGCGACTGGGATCTCGGGATTTCGGACGAAGAGC GCGCGGTCAGGCGAGCTTCATCGCGGCAGCTACGGGAGAGCCTGTCGACG TTCCAGGACGTAAACTTCAGCGATGGGGATCATGACGACGGCAGCGGCAG CGTGGCGCCTCCGTTGGGACCGGGCAGCAGCGACGGCGGCAACGACAGCG ATGAGGGGGAGGAAGGGGGAGGGCAAGATGGTGACGCCCCGCCCAGCTTG AAGCGAACCGTTTAATGAAGAGAGTATGAGTACTTTTCTGTATTTTTACC GTTAGTAGGTGCGATTGTTACCGAAACTGGAATGGCGAGAACTATGTATG TACAGAGTTAAAAGGCCCACACGGCAAGTCTTCGATGCCAAGGCTTTCGC ACGGGTCTTCGACGTTGCTGTGTCGGGGATGGGAGAGCTGGGAAGCGACG GGGGAGCAGCTGGAGAAACGTTTAGCGTGTGCCTTGAGGCCGGTCGAAAT CGTCTTTCGCCGCAAGGGGCAAGCGACCCGCAAATCGATTCGCGCTTTGG AAGCAACTAACAAGTTACCGCCTGAGCGTCGAGCTGAAGCGCGTCCGGCT TCTATCCTGCTCCGAGGACAAGCCGTCAAAAGCTGAGAGGCAGTGGCGAC GCGCTTGGAAAGAAAGTACCTGGAATGCAACGTGCCGAAGTTTTCTGCAC GCGAGGCTTTCATTTCACTACGAGCTCCATCTTATCGTGTGGAATATTGT TCACACATACTGCAGTGCATGCTACTGTCAGTACCAGCAGAGCGATGTCT TGAAGCGATAAATAAGCCCAGAGCGTGCGGCGTCTTGGGCTGTTGTGGGG CACCGCAAGCGGCTGGGCAGCGATTTCGCACCGTTTGGCGACGCCCCCTA CGGTCGCTGCTGTGGCATTCTCCGGTTCGATTCGATTCGACTAACTTCGC GGCGCTCAACGTCGTCCCATGCTGTACGATCAGCCTTGTGTGTTTCTACC GAGAATTTCACATGGCTGGATCTCGAATGAGATGGGAAGCCGGGTTACAA AGGGAAAGTCAACCGCACGAGGCTCGGAAATTATTATCCTCTTTATACCC TGCGACTGGAGTTCATAAGCCTGCGCTCGCCTCGGGACAGGCATCGTCCA TGTGTTTTTTTTGCTGCCCAAGACACAACGACGTATGTAACGCGCGGCCA TGCAATGAGTGCGTGAAGTTGAGGGGTCGCGACACATGCGCAAGTAAAGT AACCGAAAGAGCAATTTTGGTGCCTTTTTTTTTTG
back to top

Coding sequence (CDS) from alignment at F-serratus_M_contig13:347202..358236-

>mRNA_F-serratus_M_contig13.2185.1 ID=mRNA_F-serratus_M_contig13.2185.1|Name=mRNA_F-serratus_M_contig13.2185.1|organism=Fucus serratus male|type=CDS|length=2328bp|location=Sequence derived from alignment at F-serratus_M_contig13:347202..358236- (Fucus serratus male)
ATGACGATGAAAGCAGCAGCTCTTTCGTTAGCTGTCCTCGTGGTTGCAGG
GACGCTGGGCACGACGACCTCCTTCACCGCGAAGCCTTCGTCGTGTCGGG
CACGTCATACATGCCTGTCGGTGCACTCTGCGTCTTCTTCAGCGGCGCCT
GCTGTGTGGCGTTGGGCTTCCCGCGCGAGGCATGGGTCGTGCGAGGTTAT
TCCGCCGCCTCCGGCGCTGGAGGACGGTCCGTCGTGCCTGGAGTTTGCAA
GCAGAGGCAGAGCTAACGCTTATGCTCCGCATGCCGCCCTCAAGATTGTA
GAGGGTAGCATCGAGCCTCAATCTCTACTGGGAAAAACGGTCGTAACGAA
GATGACGATGAAAGCAGCAGCTCTTTCGTTAGCTGTCCTCGTGGTTGCAG
GGACGCTGGGCACGACGACCTCCTTCACCGCGAAGCCTTCGTCGTGTCGG
GCACGTCATACATGCCTGTCGGTGCACTCTGCGTCTTCTTCAGCGGCGCC
TGCTGTGTGGCGTTGGGCTTCCCGCGCGAGGCATGGGTCGTGCGAGGTTA
TTCCGCCGCCTCCGGCGCTGGAGGACGGTCCGTCGTGCCTGGAGTTTGCA
AGCAGAGGCAGAGCTAACGCTTATGCTCCGCATGCCGCCCTCAAGATTGT
AGAGGGTAGCATCGAGCCTCAATCTCTACTGGGAAAAACGGTCGTAACGA
AGGCAATAAGGGCTTTCGGGCTAGCGCTGGCGTGGTACTTCGCTTCGTCG
GTGGCCGCTTTCGCTGTCTCCGGCGCTACTGGGCTACCTTACCAGCCTCG
TCCTCGGCGACGGATACCGATCGCACCCACCATTTTTCTCCTGTACCTGA
TGAGCGACAAGAAGATGAAAACGAGGAACAGGCAATAAGGGCTTTCGGGC
TAGCGCTGGCGTGGTACTTCGCTTCGTCGGTGGCCGCTTTCGCTGTCTCC
GGCGCTACTGGGCTACCTTACCAGCCTCGTCCTCGGCGACGGATACCGAT
CGCACCCACCATTTTTCTCCTGTACCTGATGAGCGACAAGAAGATGAAAA
CGAGGAACAGGTTCGCCGGCGTGGTGCCACAAGACGACCAGTCGCGACGG
CGGCTGGCGGACGACGCGTACGACATGGCCCTCTCCTGGGGAAAGCCCGC
GGGCAGGATCGCGCTCCTCGCCGTGGACACATTCTTTTTCCTAATCATTT
TCAGGTTCGCCGGCGTGGTGCCACAAGACGACCAGTCGCGACGGCGGCTG
GCGGACGACGCGTACGACATGGCCCTCTCCTGGGGAAAGCCCGCGGGCAG
GATCGCGCTCCTCGCCGTGGACACATTCTTTTTCCTAATCATTTTCAGGT
TCTCGGGATACGACTTCTCGAAGCTTTTGGCGGGGCGGGGAATGGAGCAG
CTCAGGTCCCTCGAGTTCTGGTTCTCGGGATACGACTTCTCGAAGCTTTT
GGCGGGGCGGGGAATGGAGCAGCTCAGGTCCCTCGAGTTCTGGATACCAT
ATGGCGCGGCGGCCACGCTTGGGGCAGCAGGGGTCACCAGGATCATTCGG
ATACCATATGGCGCGGCGGCCACGCTTGGGGCAGCAGGGGTCACCAGGAT
CATTCGGAGGTTCGGTCACGGCTACCTTCGAAGCACAATCGCGACGCTGC
TGGCCCCAATAATTCGGACCGTTATCATTAAGCCTGCCAAGGAGGTTCGG
TCACGGCTACCTTCGAAGCACAATCGCGACGCTGCTGGCCCCAATAATTC
GGACCGTTATCATTAAGCCTGCCAAGACGGTCGCGTCCCTCTTCGGTGCC
GGCGGCGACTGGGATCTCGGGATTTCGGACGAAGAGCGCGCGGTCAGGCG
AGCTTCATCGCGGCAGCTACGGGAGAGCCTGTCGACGTTCCAGGACGTAA
ACTTCAGCGATGGGGATCATGACGACGGCAGCGGCAGCGTGGCGCCTCCG
TTGGGACCGGGCAGCAGCGACGGCGGCAACGACAGCGATGAGGGGGAGGA
AGGGGGAGGGCAAGATGGTGACGCCCCGCCCAGCTTGAAGCGAACCGTTT
AAACGGTCGCGTCCCTCTTCGGTGCCGGCGGCGACTGGGATCTCGGGATT
TCGGACGAAGAGCGCGCGGTCAGGCGAGCTTCATCGCGGCAGCTACGGGA
GAGCCTGTCGACGTTCCAGGACGTAAACTTCAGCGATGGGGATCATGACG
ACGGCAGCGGCAGCGTGGCGCCTCCGTTGGGACCGGGCAGCAGCGACGGC
GGCAACGACAGCGATGAGGGGGAGGAAGGGGGAGGGCAAGATGGTGACGC
CCCGCCCAGCTTGAAGCGAACCGTTTAA
back to top