mRNA_F-serratus_M_contig13.2190.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig13.2190.1 vs. uniprot
Match: D7FYV6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV6_ECTSI) HSP 1 Score: 85.9 bits (211), Expect = 1.720e-14 Identity = 108/352 (30.68%), Postives = 157/352 (44.60%), Query Frame = 1
Query: 49 STRVSNMYNPIDPDELARIKSKKDAYRRELEAQIAEHKKKIENDYYDHHGSKEDAKVILVREAMAEGKMQNGVARGSEVDSLGDAVTNPGNYPST-RGGLISAKSEVGSPAPASSSRLLAT----PADVLVDSSFPKEDDKK-----------------GGAMVGTIYG-------GGGLME----NSDRERMREKEGASLQADALKKQVDDKKHTNTPPVKVRREKNEALLEQARQNNIITLDMEREQLHTSRHQEEGPVAKAIEPEQLSFLKEVDEARRAAVARREAEAKIEREQKELEKKYAEERAAEKPLGIGSTEQGEVYLD---AQKLDPARETGPAKWPKKVCIS 996
ST+ S M+NP+DP+ELARI++KK++YRR+LEAQ+AEH K + GSKE A+V +++AM E +N +A G E+ LG V NY +T RG AK +PA + L A+ P+ V S P+ + GGA V G G GL E ++ ER REK + +QA+ALKKQV+D N + D+++ ++AR +EREQKELE+KYA ERAAE+PL S+ + + +K R P K P+++ ++
Sbjct: 568 STKASTMHNPVDPEELARIQAKKESYRRDLEAQMAEHTKLQDQRKQGVPGSKE-AEVFHLQKAMEERSERNKMAPGYEIGPLGVPVIKD-NYSTTGRGQRSPAKMRAVAPAATGNQGLSASSAIDPSSGPVGESTPQTSSELFGSGHDGTSSSLLAPSGGGADVSDAEGVGAPSRRGSGLRELLGIETNAERDREK--SRVQAEALKKQVED--------------------------NKVRRDIQKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDAR------------VEREQKELERKYARERAAEEPLVQASSNPANLPVSEFPTKKGGGTRSPRPIKSPRELEVN 877
BLAST of mRNA_F-serratus_M_contig13.2190.1 vs. uniprot
Match: A0A6H5KLL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLL2_9PHAE) HSP 1 Score: 78.2 bits (191), Expect = 5.900e-12 Identity = 77/206 (37.38%), Postives = 108/206 (52.43%), Query Frame = 1
Query: 49 STRVSNMYNPIDPDELARIKSKKDAYRRELEAQIAEHKKKIENDYYDHHGSKEDAKVILVREAMAEGKMQNGVARGSEVDSLGDAVTNPGNYPST-RGGLISAKSEVGSPAPASSSRLLATPADVL----VDSSFPKEDD-----------------KKGGAMVGT-IYGGGGLME--NSDRERMREKEGASLQADALKKQVDDKK 591
ST+ S M+NP+DP ELA+I++KK++YRR+LEAQ+AE K H SKE A+V +++AM E +N +A G E+ LG V NY +T RG AK +PA + L A+ A L V S P+ + +GGA VG G GL E + R++E + +QA+ALKKQV+D K
Sbjct: 571 STKASKMHNPVDPVELAKIQAKKESYRRDLEAQMAERTKLQNQRKQGMHRSKE-AEVFYLQQAMEERNERNKMAPGYEIGPLGVPVIKD-NYSTTGRGQRSPAKMRAVAPAATVNRGLAASSAIGLSSTPVGESVPQTNSDLFGSGHDGTSSSLLPPSEGGAGVGAPSRRGSGLRELLGIETRAERDREKSRVQAEALKKQVEDNK 774 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig13.2190.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig13.2190.1 >prot_F-serratus_M_contig13.2190.1 ID=prot_F-serratus_M_contig13.2190.1|Name=mRNA_F-serratus_M_contig13.2190.1|organism=Fucus serratus male|type=polypeptide|length=359bp GSRVVPSNASSLYNRMSTRVSNMYNPIDPDELARIKSKKDAYRRELEAQIback to top mRNA from alignment at F-serratus_M_contig13:423331..432075+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig13.2190.1 ID=mRNA_F-serratus_M_contig13.2190.1|Name=mRNA_F-serratus_M_contig13.2190.1|organism=Fucus serratus male|type=mRNA|length=8745bp|location=Sequence derived from alignment at F-serratus_M_contig13:423331..432075+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig13:423331..432075+ >mRNA_F-serratus_M_contig13.2190.1 ID=mRNA_F-serratus_M_contig13.2190.1|Name=mRNA_F-serratus_M_contig13.2190.1|organism=Fucus serratus male|type=CDS|length=2154bp|location=Sequence derived from alignment at F-serratus_M_contig13:423331..432075+ (Fucus serratus male)back to top |