mRNA_F-serratus_M_contig1294.2167.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1294.2167.1 vs. uniprot
Match: D7FS02_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FS02_ECTSI) HSP 1 Score: 115 bits (288), Expect = 3.200e-23 Identity = 154/515 (29.90%), Postives = 230/515 (44.66%), Query Frame = 1
Query: 1024 KMQKQIIKDREVIRQELERGLSEEFRNRRRENEELRREREHHNQEMNWILKELMKAKAARYVRRTELEDERRMHLMTIRKQKKCEAMITKLKTRLTDAMSSKLSQPEHPRTSAYPGVLSAVAPPNVPHIMIQ--RSPQPAHDTGRGISGDGSHRAGSSGGTEMSDELAFGQCRGTSSGIGSSNNIYGNSNRSNGQAASVDRSKVTEPLMPAWSE-------GTNT--FDKGTASIVEHDSGNVSTYGGRKRRRSCADV---VEGDVICRGNDCNGVSFKIGTCGHMAKENSSSETATPGGKSGRGN-------------------------EEESEVPEVLP-RIASEVTSTDVWSQLDSYVNRRRSEVARAKRHVRVIDAMCKNLPKSTGHIGNTIKISHRRNTTIRHAGK---LVQVQG-RADCLKKKYDVAWGASQRRQTWRRANSNDSTLVNKFSFPVKERSIVSDSEETFSGSVLPSGTSSKPRTNLKPHPPRRVRRALQLDGSVSSLSQ 2436
K Q ++ +D E IR +LERGLSEEFR+ RRE E LRRE+ H + E+N I+++ + + + EL DERRMH TIR++K+ EA+I L+ +LT A++ +P +P +++ + P N P R H G DG+H T G G N + RS + + + + P P E G N+ G + +G V+ + S AD+ VE N NG S + T + A S T GG++ RG+ EE E+PE++ +E++S DVW LDSYV+RR SEVARAKRH+ VI+AM K+L KS GN + T + G+ V+V G C + + W AS+ +++W+ S+D++ N R+ + + T T +PR KP PP R +R D S +S+SQ
Sbjct: 5 KAQLRLARDAEKIRLDLERGLSEEFRSLRRETEVLRREKAHKDSEINRIMRKAAQIERDQRTAGVELADERRMHQTTIRRRKRAEAVINNLQAQLTVALAPASGRP-YPPSNSCASPHPSKKPWNSPRRPAAQGRGKNIVHQCDEGDGRDGAHGE-------------------TLPGAGPENGPGPGTGRSVSKVSML----LVPPRTPQEQEEGQEEIGGWNSERVATGFVAAAAAANGGVAQEAAARGSASRADLELPVE-------NGGNGNSERP-TYRNGASVGEKSGLVTSGGRAVRGHHECGRTESGSGGVRVGGGXXXXXXGEEGDEIPELIACGSGTEISSGDVWGMLDSYVHRR-SEVARAKRHLGVIEAMRKHLEKSNARRGNPTGSNCNSITARDNQGRGLRRVRVGGDETTCSGQVDEAVWKASRPKRSWQDRQSDDTSCTNG------RRARNNKAVYT---------TPRRPRVRFKPRPPPRCKR----DESETSVSQ 467 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1294.2167.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1294.2167.1 >prot_F-serratus_M_contig1294.2167.1 ID=prot_F-serratus_M_contig1294.2167.1|Name=mRNA_F-serratus_M_contig1294.2167.1|organism=Fucus serratus male|type=polypeptide|length=984bp MAARRTAGDSRRRRTRLKAPLQGFAPIPPPRRSRVGREEQTSRMGRRKGQback to top mRNA from alignment at F-serratus_M_contig1294:208031..221481- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1294.2167.1 ID=mRNA_F-serratus_M_contig1294.2167.1|Name=mRNA_F-serratus_M_contig1294.2167.1|organism=Fucus serratus male|type=mRNA|length=13451bp|location=Sequence derived from alignment at F-serratus_M_contig1294:208031..221481- (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1294:208031..221481- >mRNA_F-serratus_M_contig1294.2167.1 ID=mRNA_F-serratus_M_contig1294.2167.1|Name=mRNA_F-serratus_M_contig1294.2167.1|organism=Fucus serratus male|type=CDS|length=5904bp|location=Sequence derived from alignment at F-serratus_M_contig1294:208031..221481- (Fucus serratus male)back to top |