mRNA_F-serratus_M_contig1294.2165.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: D7FV73_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV73_ECTSI) HSP 1 Score: 253 bits (646), Expect = 3.860e-79 Identity = 129/176 (73.30%), Postives = 148/176 (84.09%), Query Frame = 3
Query: 345 ARRDMSTTKGKDVASTI--PGMIKGFGLRQKAPNTGNTALGKGFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALLQLSETEE 866
+RR MS+ +G ++T PG IKGFG RQK + GNTALGKGFDLMEDD SRKK++I GYDP+GFQLGDG+DVRGSMIC PNSFVLW+PK+ DIT+ESL ++ELV PKID++IVGVG+RM RLDP LVK+LASK I VEQMDTVNACSTFNVLNAEDRRVAAALLQLS EE
Sbjct: 32 SRRGMSSARGGKGSNTAGPPGTIKGFGRRQKPVDAGNTALGKGFDLMEDDPDSRKKVVIGGYDPHGFQLGDGVDVRGSMICMPNSFVLWQPKRPSDITVESLRMVELVIPKIDLIIVGVGERMTARLDPVLVKHLASKGIRVEQMDTVNACSTFNVLNAEDRRVAAALLQLSPEEE 207
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: A0A7S1UI11_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UI11_9STRA) HSP 1 Score: 123 bits (309), Expect = 4.120e-29 Identity = 69/172 (40.12%), Postives = 106/172 (61.63%), Query Frame = 3
Query: 456 LGKGFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALLQLSETEE*A*RCSTYLAMGIIYLLARTFRSPSRLPDVDVIHA 971
+G+G D+M KI + G++ GF +G I+++ S++ PNSF LW+P+ +IT+ESL L L+TPKI+++I+G G+R VE L PEL++Y K I VE M T +A +T+NVL +EDR VAAALL + T+ + + +A + + P RLP D++ A
Sbjct: 43 IGRGHDIMSGVNEGTMKITVDGFEDEGFIIGS-INIKSSVLLLPNSFFLWKPRTVDEITVESLLLPTLITPKIEMLIIGKGERNVEPLAPELLRYFKEKGIVVEHMSTSHALATYNVLTSEDRNVAAALLTIVPTD----KENGAIAANMEEYMPEPDEDPFRLPLPDILDA 209
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: A0A1V9YKK9_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKK9_9STRA) HSP 1 Score: 120 bits (301), Expect = 6.660e-29 Identity = 57/127 (44.88%), Postives = 91/127 (71.65%), Query Frame = 3
Query: 465 GFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALL 845
G D+ ++ + K+ IA YD GF + D +++RGS+ P+ ++W+P ++IT+ESL++ + P I+I+++G GKR+ +LDP+LV+YL S I VE +D+ NAC+TFN+LNAEDR+VAAA+L
Sbjct: 23 GHDMHKEMMTGTSKVSIAEYDDGGFVVND-VNMRGSIALLPSIAMMWKPNTMEEITVESLNIFTVANPPIEILVLGCGKRIARQLDPKLVEYLKSHGIVVEYLDSFNACATFNILNAEDRKVAAAIL 148
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: A0A067CV35_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CV35_SAPPC) HSP 1 Score: 120 bits (301), Expect = 7.050e-29 Identity = 56/127 (44.09%), Postives = 91/127 (71.65%), Query Frame = 3
Query: 465 GFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALL 845
G D+ ++ + K+ I+ YD GF + D +++RGS+ PN ++W+P+ +IT+ESL++ + P I+I+++G GKR+ ++L+P LV+YL S I VE +D+ NAC+TFN+LNAEDR+VAAA+L
Sbjct: 25 GHDMHKEMMTGTSKVSISEYDDGGFVVND-VNMRGSVALLPNIAMMWKPRSLDEITIESLNVFTVANPPIEILVLGCGKRIAKQLEPSLVEYLKSNGIVVEYLDSFNACATFNILNAEDRKVAAAIL 150
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: A0A8K1C5C2_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5C2_PYTOL) HSP 1 Score: 117 bits (292), Expect = 1.970e-27 Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 3
Query: 465 GFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALL 845
G D+ ++ + KI + YD GF + D +++RG ++ FP +LW+PK+ ++IT ESL L P ++I+++G G R+ +LDPEL ++L I VE D+ NACSTFN+LNAEDR+VAAA+L
Sbjct: 36 GHDMHKEMLNGTAKISVTEYDDGGFVVND-VNLRGGVVLFPEIAMLWKPKRFEEITKESLELFTFANPPVEILVLGCGARLSRQLDPELAEFLKVNGIVVEYSDSANACSTFNILNAEDRKVAAAIL 161
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: K8Z3H4_NANGC (Nadh dehydrogenase (Fragment) n=4 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z3H4_NANGC) HSP 1 Score: 117 bits (293), Expect = 4.520e-27 Identity = 65/142 (45.77%), Postives = 97/142 (68.31%), Query Frame = 3
Query: 456 LGKGFDLM----EDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVER-LDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALLQLSETEE 866
LGKG D++ E++ G R++ + GYD GF++ D ++ RGS++ P + LW+PK+ ++IT ESL L +V P I+I+I+G G+ +V R L +K+LA+ ++VE MDT +ACSTFN+LN EDRRVAAALL + E
Sbjct: 68 LGKGIDVLAVGNEEEAG-RERTFLLGYDGQGFEVRD-VNYRGSILALPTACFLWKPKKIEEITPESLAPLLIVKPAIEILIIGTGEEVVGRALALTTLKFLAANGVAVEHMDTTSACSTFNILNQEDRRVAAALLAVDAAAE 207
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: A0A485LLY5_9STRA (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LLY5_9STRA) HSP 1 Score: 114 bits (284), Expect = 1.830e-26 Identity = 59/148 (39.86%), Postives = 93/148 (62.84%), Query Frame = 3
Query: 402 MIKGFGLRQKAPNTGNTALGKGFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALL 845
M++ RQ G + G D+ ++ + K+ I YD GF + + +++RG++ FP +LW+P+ +IT ESL + + P ++I+++G GKR+ LDP LV+YL S I VE +D+ NAC+TFN+LNAEDR+VAAA+L
Sbjct: 1 MLQRVVRRQLTRPAGVRWINYGHDMHKEMMTGTMKVAITEYDDGGFVVNE-VNLRGAIALFPEIAMLWKPRTMDEITKESLAVFTVANPPVEILVLGCGKRIPRLLDPSLVEYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAIL 147
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: A0A5D6XPN1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPN1_9STRA) HSP 1 Score: 114 bits (284), Expect = 2.170e-26 Identity = 55/131 (41.98%), Postives = 88/131 (67.18%), Query Frame = 3
Query: 453 ALGKGFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALL 845
A+ G DL ++ + K+ + YD GF + D +++RG + +P +LW+PK+ ++IT ESL + + P I+I+++G G R+ LDPE+ ++L I VE +D+VNAC+TFN+LNAEDR+VAAA+L
Sbjct: 21 AINYGHDLHKEMLNGTAKLSVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESLTVFTVANPPIEILVLGCGPRIQHHLDPEIKQFLKVNGIVVEYLDSVNACATFNILNAEDRKVAAAIL 150
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: A0A6G0XVP0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVP0_9STRA) HSP 1 Score: 113 bits (283), Expect = 2.470e-26 Identity = 56/127 (44.09%), Postives = 85/127 (66.93%), Query Frame = 3
Query: 465 GFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALL 845
G D+ ++ + K+ I YD GF + + +++RG++ FP +LW+PK +IT ESL + + P ++I+++G GKR+ LDP LV YL S I VE +D+ NAC+TFN+LNAEDR+VAAA+L
Sbjct: 22 GHDMHQEMMMDSPKVAITEYDDGGFVVNE-VNMRGAIALFPEIAMLWKPKTMDEITKESLTVFTVANPPVEILVLGCGKRIPRLLDPSLVDYLKSHGIVVEYVDSFNACATFNILNAEDRKVAAAIL 147
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Match: K3X683_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X683_GLOUD) HSP 1 Score: 111 bits (278), Expect = 1.590e-25 Identity = 53/127 (41.73%), Postives = 86/127 (67.72%), Query Frame = 3
Query: 465 GFDLMEDDVGSRKKILIAGYDPNGFQLGDGIDVRGSMICFPNSFVLWEPKQAKDITLESLHLLELVTPKIDIVIVGVGKRMVERLDPELVKYLASKRISVEQMDTVNACSTFNVLNAEDRRVAAALL 845
G D+ ++ + KI + YD GF + D +++RG + +P +LW+PK+ ++IT ES+ + + P I+I+++G G R+ LDPE+ ++L I VE +D+VNAC+TFN+LNAEDR+VAAA+L
Sbjct: 26 GHDMHKEMLNGTAKISVTDYDEGGFVVND-VNMRGGVALYPEIAMLWKPKRFEEITKESMTVFTVANPPIEILVLGCGARIQFNLDPEIKQFLKENGIVVEYLDSVNACATFNILNAEDRKVAAAIL 151 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1294.2165.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1294.2165.1 >prot_F-serratus_M_contig1294.2165.1 ID=prot_F-serratus_M_contig1294.2165.1|Name=mRNA_F-serratus_M_contig1294.2165.1|organism=Fucus serratus male|type=polypeptide|length=258bp MEKFPGTVLLVARPYARASRVWAAGIDGSGTNPRRDLSSSATTTFVERTSback to top mRNA from alignment at F-serratus_M_contig1294:173328..177422+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1294.2165.1 ID=mRNA_F-serratus_M_contig1294.2165.1|Name=mRNA_F-serratus_M_contig1294.2165.1|organism=Fucus serratus male|type=mRNA|length=4095bp|location=Sequence derived from alignment at F-serratus_M_contig1294:173328..177422+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1294:173328..177422+ >mRNA_F-serratus_M_contig1294.2165.1 ID=mRNA_F-serratus_M_contig1294.2165.1|Name=mRNA_F-serratus_M_contig1294.2165.1|organism=Fucus serratus male|type=CDS|length=1548bp|location=Sequence derived from alignment at F-serratus_M_contig1294:173328..177422+ (Fucus serratus male)back to top |