mRNA_F-serratus_M_contig1292.2159.1 (mRNA) Fucus serratus male
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Overview
Homology
BLAST of mRNA_F-serratus_M_contig1292.2159.1 vs. uniprot
Match: D7G8Y0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8Y0_ECTSI) HSP 1 Score: 239 bits (610), Expect = 2.630e-63 Identity = 251/588 (42.69%), Postives = 296/588 (50.34%), Query Frame = 3
Query: 624 MMRRPPPRPGLGKKAASG--FKITYSVTQLLDRGKDSVSKEAGCPPLEGWEKYQYDKIGPLHQEDGNSRPAQAATKEYLSTLVMRPGSARDLHAEHLAALAAKQAQEPEHS-SLGPRGGGTR----------------GAGMXXXXXXXXXXRYGDRNKDRGLSRFDHDXXRRGDGGRRDRVRDAQQPSG----RAPSRWDALKPDRDRDRGYNNRSNRDSRDRDDGDELVGGGRQDARLVGGRDRDRDGRNARPA---------DGLRDGGLAAHDRALANERATAAGGXXXXXXXXXRLGXXXXXGGRXXXXXXXXXVNNDADIWDMPSSALPGGEGASKDPPRNSRAAGLKSAEREQREKDQKAEEVREFQAKKLMFEKELEKERAAYKQQGPPKGAAAAPNGDATDFPDMGGGFLEGNDGDGSGDGNNGLLGGALEENTSATPIRDNGNEDGSATRFEGEKPERDGKQKTRGSFLDGFLGGGG-----REDGTRVGGVISTAESEPRDGGSVAGAGGGAXXXXXXXFPGGGFFSFMAPGNSISTIDKITEVTRG-GAGKIFSPDSTAPGVVPSRLSPWEKTENK 2273
MMRRPP R GLG K ASG FKITYSV QLL GK+ + EAGCPP EGW+KY+YD IGPL E+ P+ KE + L M+PGSARDLH+EH+AAL AKQ +P+ S SLGPRGGG R X R+GDRNK XX P G RAPSRWDALKPDR+RDRGYN DGL DGGL AHDRA+A+E+A AAGG XXXXXXXX XXXXX XXXXXX ++ADIWDMP++ LPG GA+K+PP+N+RAAGL+SA+RE+RE+++K +E F+ ++L FE+E K QG G A NG +FPDMGGGFL G G GD GS ++ ++P+ Q S LD G G XXXXXXXFPGGG FSFMAPGNSISTIDK TE TRG G KIFSP G P+ +PW K + K
Sbjct: 1 MMRRPPTRAGLGGKKASGTGFKITYSVNQLLSMGKELMESEAGCPPPEGWDKYEYDTIGPLIDENNTRIPS----KEEAAALKMKPGSARDLHSEHIAALVAKQGADPDQSPSLGPRGGGDRPDRDRGXXXXXXXXXXXXXXXWGDRDRDWDRFGDRNKXXXXXXXXXXXXXXXXXXXXXXXXXXXGPGGAGGGRAPSRWDALKPDRERDRGYNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDGLHDGGLGAHDRAVAHEKAIAAGGAXXXXXXXXXXXXXXXX---XXXXXXRYGGTSEADIWDMPTT-LPGDGGATKEPPKNTRAAGLRSADRERREENRKKDEAAAFERERLEFERERAKVL-----QGRDGGKA---NGGPAEFPDMGGGFLGG----GIGDXXXXXXXXXXXXXXXXXXXXXXXXGSGSGSQ---DQPQLVKNQ----SVLDRVFGAGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFPGGGLFSFMAPGNSISTIDKFTEATRGKGNAKIFSP-----GTKPA-ATPWGKVDKK 555 The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1292.2159.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90) Total hits: 1
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_F-serratus_M_contig1292.2159.1 >prot_F-serratus_M_contig1292.2159.1 ID=prot_F-serratus_M_contig1292.2159.1|Name=mRNA_F-serratus_M_contig1292.2159.1|organism=Fucus serratus male|type=polypeptide|length=1196bp MMRRPPPRPGLGKKAASGFKITYSVTQLLDRGKDSVSKEAGCPPLEGWEKback to top mRNA from alignment at F-serratus_M_contig1292:137493..149351+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_F-serratus_M_contig1292.2159.1 ID=mRNA_F-serratus_M_contig1292.2159.1|Name=mRNA_F-serratus_M_contig1292.2159.1|organism=Fucus serratus male|type=mRNA|length=11859bp|location=Sequence derived from alignment at F-serratus_M_contig1292:137493..149351+ (Fucus serratus male)back to top Coding sequence (CDS) from alignment at F-serratus_M_contig1292:137493..149351+ >mRNA_F-serratus_M_contig1292.2159.1 ID=mRNA_F-serratus_M_contig1292.2159.1|Name=mRNA_F-serratus_M_contig1292.2159.1|organism=Fucus serratus male|type=CDS|length=7176bp|location=Sequence derived from alignment at F-serratus_M_contig1292:137493..149351+ (Fucus serratus male)back to top |