mRNA_F-serratus_M_contig1291.2153.1 (mRNA) Fucus serratus male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_F-serratus_M_contig1291.2153.1
Unique NamemRNA_F-serratus_M_contig1291.2153.1
TypemRNA
OrganismFucus serratus male (Fucus serratus male (Toothed wrack or serrated wrack))
Homology
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A438HUL4_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=3 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HUL4_VITVI)

HSP 1 Score: 211 bits (537), Expect = 2.570e-60
Identity = 131/351 (37.32%), Postives = 191/351 (54.42%), Query Frame = 1
Query:    1 KIGQDGNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQ--EFPGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNKKAK--IPLSKADE------PRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQ 1023
            K    GN+ +YK RLVA+GF Q EG+   ET+SP  S  S R+++A+ A  D EL   D + AFL   IDE IY+  PE F+  +    V RL ++IYGL +A R    KF   +T+  F++   D  ++ K   G   +++V++VDDIL  + D   +      L  K  +KD+G+A + +   I  +R    L   Q  Y+  ++ RF ++  A    P++K D+      P+N  EK+++ +FPY  AVG+LM     TRPDIA  V  + R+  N G  H K    +  YL  TK + +TY  +   L + AY+D DF G LD+RRS SG + MLA GA+SW S  Q
Sbjct:   60 KRDSKGNIVRYKARLVAKGFTQKEGIDYKETFSPVSSKDSFRIIMALVAHYDLELHQMDVKTAFLNGNIDETIYMVQPENFESNDSKQLVCRLKRSIYGLKQASRQWYRKFDQVITSFGFKENTVDQCIYLKF-SGSKFIILVLYVDDILLASSDVGLLHETMRFLSSKFDMKDLGNASFVLGIQIHRDRSRGILGLSQKAYIDKVLSRFGMSNYAPGDTPVAKGDKFSLHQCPKNELEKKDMERFPYASAVGSLMYAQVCTRPDIAYIVGMLGRYLSNPGMDHWKKAKRVMRYLQRTKDYMLTYR-RSSHLEIVAYSDSDFAGCLDSRRSTSGCIFMLAGGAVSWKSVKQ 408          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A2N9IUC8_FAGSY (Integrase catalytic domain-containing protein n=2 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9IUC8_FAGSY)

HSP 1 Score: 216 bits (551), Expect = 2.910e-60
Identity = 138/354 (38.98%), Postives = 192/354 (54.24%), Query Frame = 1
Query:    1 KIGQDGNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEF----QEFPGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNKKAK--------IPLSKADEPRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQE 1026
            K+G  G VE YK RLVA+G+ Q  G+   ET+SP     SIR+LL++ A  D E+   D + AFL   I EEIY++ P  F    QE    V +L K+IYGL +A R  N +F + + +  F Q   +P V++KV  G     ++++VDDIL    D   M      L     +KD+G+A Y +   +  +RK R L   Q  Y+  ++ RF +    K        + LSK   P+  EE+E++R  PY  AVG+LM     TRPDI  AV  V+R+  N GP H  AV +I  YL  TKH+ + +G +   L ++ YTD DF   +D R+SISG V  L KGAISW S  Q+
Sbjct:  368 KLGPTGKVETYKVRLVAKGYTQKAGIDYEETFSPVAMLKSIRILLSIAAHYDYEIWQMDVKTAFLNGNIREEIYMDQPVGFISHGQE--SKVCKLMKSIYGLKQASRSWNIRFDEAIKSFGFSQNIDEPCVYKKV-SGRIITFLILYVDDILLIGNDVGAMSSIKMWLSSHFAMKDLGEASYILGIKLFRDRKKRLLGLSQVNYIDKILARFSMQDSKKGFSPFRHGVHLSKNMCPKTQEEREKMRNCPYASAVGSLMYAMLCTRPDICYAVSIVSRYQSNPGPEHWTAVKHILKYLNRTKHYFLVFGSKD--LNIQGYTDSDFQSDIDDRKSISGFVFTLGKGAISWRSCKQD 716          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A6H5JQD0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQD0_9PHAE)

HSP 1 Score: 207 bits (527), Expect = 3.400e-60
Identity = 119/340 (35.00%), Postives = 193/340 (56.76%), Query Frame = 1
Query:   10 QDGNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNKKAKIPLSKADEPRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYG-GQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQE 1026
            +   + K K RLVA+GF Q  GV   ET+SPT + AS R+++A+    + EL H+D EQAF+++ +D E+++++P       G V RLNK++YGL +A R    +   ++  I FEQ+ +DP V R ++      +V +HVDDIL +A   +  +   + LG     K +G+  +++ C  + +R+A  ++  Q  Y++S++ RF+V + + IP S  ++ R+  E E     P++E VG+LM  A  TRPDI+ AVRAVAR       +H KA   I +YLL T H  + +   +        Y D DF    + RRS+SGA++++A   + W S+ Q+
Sbjct:   39 ETAKIVKAKARLVAKGFKQKYGVDYLETFSPTANAASHRLVVALACKYNLELLHWDIEQAFVQSELDYEVFMKLPPGCGSMSGKVVRLNKSLYGLKQASRTFYKRLVSELKRIGFEQSMSDPCVLRFMMGDEVVGMVAIHVDDIL-YAGTTSLAEVVVAALGDFLPTKSLGEVRFFLGCAFVRDREAGTIEMSQESYIRSVLERFNVCRTSSIPASPTNDYRSVMEDEGAGDVPFREVVGSLMWIANQTRPDISNAVRAVARHSHEPKKSHWKAAQKILNYLLETAHLTLKFKPDKSVDASTLVYVDADFASKANDRRSVSGAIVLVASMPVVWISKTQK 377          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A060T044_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=3 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060T044_PYCCI)

HSP 1 Score: 213 bits (541), Expect = 7.340e-60
Identity = 131/350 (37.43%), Postives = 189/350 (54.00%), Query Frame = 1
Query:    1 KIGQDGNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQE-FPGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNK--------KAKIPLSKADEPRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQ 1023
            K   DG++E+YK RLVA+GF Q  G    ET++PTP  ASIR +LA+ A +D EL   D   A+L   + EE+Y++ PE F+E  P  V  L K++YGL +AGRC + K  + +T + F++   + SV+  + DG   +++ V VDDI   +K + ++ R   EL    +L+D+G   + +   I  +R  R L   Q  Y   ++ R+               + LS    P  P    E++  PY +AVG+L   A  TRPDIA  V  +ARF KN G AH KAV ++F Y+  T  + +TY          +YTD D  G  DT RS SG V+ +  GAISW SR+Q
Sbjct:  196 KRNADGSIERYKGRLVAKGFSQRPGFDYNETFAPTPKWASIRAILALAALEDLELESVDISSAYLNGELKEEVYMKQPEGFEEKSPDWVWHLLKSLYGLKQAGRCWHEKLHEVLTKLGFDRLVCEHSVWVYLRDG-VRIIISVFVDDITIASKSKDSIQRVKDELRAHFKLRDLGPTSWLLGVKIERDRAKRSLSISQRQYALDILERYGFANCDPVGTPMDPGLRLSADMGPSTPSAAREMQDVPYGQAVGSLFYLAVATRPDIARTVGNLARFSKNPGMAHWKAVKHLFRYIKGTLDYKLTYSPSSSDELFTSYTDADHAGCPDTGRSTSGYVIKMGTGAISWSSRLQ 544          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A6H5JLN0_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLN0_9PHAE)

HSP 1 Score: 206 bits (525), Expect = 1.790e-59
Identity = 116/314 (36.94%), Postives = 181/314 (57.64%), Query Frame = 1
Query:   88 ETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQEFPGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNKKAKIPLSKADEPRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYG-GQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQE 1026
            ETY+PT + +S+R+L AM   ++  LRHFD +QAF+++ +DE++++ +PE      G + +LNK++YGL +A R  +S     +  + F Q  AD  VFR + +G   + +VVHVDDI +  +++   D+F  +L     +K++GD  +Y  C    +  A  LK  Q  Y + +   F V    +IPL    +    ++ EE+  +P++E +G+LM  AT TRPDIA AVRAVAR+C +    H +A + I  Y++ T   GIT+  G   GL ME + D D+      RRS+SG ++M   G ISW SR Q+
Sbjct:   10 ETYAPTVAVSSVRLLAAMACEQNLSLRHFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWHSHLARCLICLGFIQCMADTCVFRLIEEGRVVVTLVVHVDDIFSIGEEERC-DQFGRDLNTMVPVKNLGDLRWYSGCFYERDWDAGTLKISQQTYAEELGMEFGVEYGKEIPLPVGLKLSEFDQDEEVVSWPFRELIGSLMWLATQTRPDIANAVRAVARYCASPKEIHWRAGLGILGYVVRTSDLGITFRRGSVAGLSMEVFVDADYASKAADRRSVSGGLVMCGGGCISWFSRTQK 322          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A1Y1IVX6_KLENI (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IVX6_KLENI)

HSP 1 Score: 216 bits (549), Expect = 2.510e-59
Identity = 128/346 (36.99%), Postives = 200/346 (57.80%), Query Frame = 1
Query:    1 KIGQD--GNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQEF-PGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVN--KKAKIPLSKADEPRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQ 1023
            KI +D  GN+E++K RLVA+GF Q +GV   E Y+P     ++R LL + AA+D EL   D + AFL   ++EEIY++ P+ +++  P  V RL K IYGL +A R  + K   ++  IEF  +++D ++F  V+DG   + VVV VDDIL  AK +  + +  + L +K  ++D+G A Y++   +  +R+AR +K  Q    K ++ R+ +   K    PLS  ++ +   +  +  K+PY E VG+L+  +  TRPDIA AV A+AR+       H +A + +  YL  T   G+T+GG    L    Y D D+ G +D+RRS +G V ++  GA SW SR+Q
Sbjct:  612 KIKRDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPETVCRLKKTIYGLRQAPRAWHQKLKTELGEIEFRASESDAALFTGVIDG-ERVWVVVWVDDILIAAKGEQRLAKVKAHLSEKFDVRDLGPAEYFLGMELTRDRRARTIKLTQKKLTKELLGRYGLEAAKARSTPLSSGEKLQREGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMAGPTEEHWRAALGVARYLSGTAELGVTFGGSAEPLV--GYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQ 954          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A1Y1IQX0_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IQX0_KLENI)

HSP 1 Score: 216 bits (549), Expect = 3.840e-59
Identity = 128/346 (36.99%), Postives = 201/346 (58.09%), Query Frame = 1
Query:    1 KIGQD--GNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQEF-PGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVN--KKAKIPLSKADEPRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQ 1023
            KI QD  GN+E++K RLVA+GF Q +GV   E Y+P     ++R LL + AA+D EL   D + AFL   ++EEIY++ P+ +++  P  V RL K IYGL +A R  + +   ++  IEF+ +++D ++F  VVDG   + VVV VDDIL  A  +  + +  + L +K  ++D+G A Y++   +  +R+AR +K  Q    K ++ R+++   K    PLS  ++ +   +  +  K+PY E VG+L+  +  TRPDIA AV A+AR+       H +A + +  YL  T   G+T+GG    L    Y D D+ G +D+RRS +G V ++  GA SW SR+Q
Sbjct:  887 KIKQDAAGNIERFKSRLVAKGFLQRQGVDFEEVYAPVSKHTTLRALLGVVAARDLELHQLDVKTAFLNGELEEEIYMQQPQGYEQGGPKTVCRLKKTIYGLRQAPRAWHQRLKAELGEIEFQASESDAALFTGVVDG-ERVWVVVWVDDILIAAAGEKRLAKVKAHLSRKFDVRDLGPAEYFLGMELTRDRRARTVKLTQKKLTKELLGRYELEAAKARSTPLSSGEKLQKEGDPLDTGKYPYSELVGSLLYLSVCTRPDIAQAVGALARYMSGPTQEHWRAALGVVRYLSGTAELGVTFGGSAEPLV--GYADADYAGDVDSRRSTTGYVFLVYGGAASWSSRLQ 1229          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A438JMN5_VITVI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Vitis vinifera TaxID=29760 RepID=A0A438JMN5_VITVI)

HSP 1 Score: 207 bits (526), Expect = 7.370e-59
Identity = 128/346 (36.99%), Postives = 194/346 (56.07%), Query Frame = 1
Query:   16 GNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQEFPGA--VGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNKKAK--IPLSKADE------PRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQ 1023
            GN+E++K RLVA+GF Q EG+   +T+SP     S+R+++A+ A  D EL   D + AFL   +DE+IY+E PE F +      V +L K+IYGL +A R    KF + +T+  F++   D  ++ KV  G   + ++++VDDIL  + D   +      L +   + DMG+A Y ++  I  +R    L   Q  Y+  ++ RF++   +    P+ K D+      PRN  E+E+++K PY  AVG+LM   T TRPDI+ AV  + R+  + G  H KA   +  YL  TK + +TY  +   L +  Y+D D+GG LD+ +S SG V MLA GAISW S  Q
Sbjct:   52 GNIERFKARLVAKGFTQKEGIDYKDTFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLDEDIYMEQPEGFAKKGNEHLVCKLKKSIYGLKQASRQWYIKFNNTITSFGFKENILDQCIYLKV-SGSKFIFLILYVDDILLASSDLGLLRETKEYLSKNFHMVDMGEANYVISIEIFRDRSRGVLGLSQKGYIDRVLERFNMQSCSSGIAPILKGDKLSKMQCPRNNIEREQMKKIPYASAVGSLMYAQTCTRPDISFAVGMLGRYQSDPGFEHWKAAKKVMRYLQGTKDYMLTYK-RSEQLEVVGYSDSDYGGCLDSLKSTSGFVFMLANGAISWKSEKQ 395          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A2P6S2B9_ROSCH (Putative RNA-directed DNA polymerase n=2 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6S2B9_ROSCH)

HSP 1 Score: 207 bits (527), Expect = 8.500e-59
Identity = 126/351 (35.90%), Postives = 193/351 (54.99%), Query Frame = 1
Query:    1 KIGQDGNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEFQEF--PGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNKKAK--IPLSKADE------PRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQ 1023
            K   +GN+E+YK RLVA+GF Q EG+   ET+SP     S+R+++A+ A  D EL   D + AFL   ++EE+++  PE F        V +L K+IYGL +A R    KF D + +  F++   D  ++ KV  G   + ++++VDDIL  + D   +    + L +K  +KDMG+A Y +   I  +R    L   Q  Y++ ++ RF + K +    P+ K D+      P+N  E++ + + PY  AVG+L+   T TRPDI+ AV  + R+  N G  H KA   +  YL  TK + +TY  +   L +  Y+D D GG LDT +S SG + +LA GA+SW S  Q
Sbjct:   70 KRDSNGNIERYKARLVAKGFTQKEGIDYKETFSPVSKKDSLRIIMALVAHFDLELHQMDVKTAFLNGNLEEEVFMNQPEGFSSKGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVVSFGFKENIVDRCIYLKV-SGSKFIFLILYVDDILLASSDLGLLHETKNFLSKKFEMKDMGEASYVIGIEIFRDRSRGLLGLSQKAYIERVLERFGMEKCSPSIAPIQKGDKFSLKQCPQNELERKGMERIPYASAVGSLVYAQTCTRPDISFAVGMLGRYQSNPGMDHWKATKKVMRYLQGTKEYMLTYR-RSDNLEVVGYSDSDLGGCLDTGKSTSGYLFLLAGGAVSWRSAKQ 418          
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Match: A0A4V1T029_9SPHI (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4V1T029_9SPHI)

HSP 1 Score: 203 bits (516), Expect = 1.160e-58
Identity = 124/351 (35.33%), Postives = 195/351 (55.56%), Query Frame = 1
Query:    1 KIGQDGNVEKYKCRLVAQGFWQVEGVHSTETYSPTPSTASIRMLLAMTAAKDAELRHFDAEQAFLKAGIDEEIYIEIPEEF--QEFPGAVGRLNKAIYGLVRAGRC*NSKFCDDMTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFASELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNKKAK--IPLSKADE------PRNPEEKEEIRKFPYQEAVGALM*TATMTRPDIACAVRAVARFCKNLGPAHKKAVMNIFHYLLHTKHWGITYGGQGCGLCMEAYTDWDFGGYLDTRRSISGAVLMLAKGAISWHSRMQ 1023
            K+  +GN+E++K RLVA+GF Q +GV   ET+SP     S+R+++AM A  D EL   D + AFL   +DEE++++ PE F        V +L K+IYGL +A R    KF D +T+  F++   D  ++ K+  G   +++V++VDDIL    D   + +    L +   +KDMG+A Y +   I  +R    L   Q  Y+  ++ RF ++K +   +P+ K D+      P+N  E++++ + PY   VG+LM   T TRP I+ AV  + R+  N G  H KA   +  YL  TK   +TY  +   L +  Y+D D+ G +D+R+S  G + +LA+GAISW S  Q
Sbjct:   17 KLDSNGNIERHKARLVAKGFTQKDGVDYKETFSPVSKKDSLRIVMAMVAHYDLELHQMDVKTAFLNGNLDEEVFMDQPEGFVVDGKEHMVCKLKKSIYGLKQASRQWYLKFNDTVTSFGFKENIVDRCIYLKI-SGSKFIILVLYVDDILLATNDLGLLRQTKEFLSKNFEMKDMGEASYVIGIEISRDRSQGWLGLSQKAYINKVLERFKMDKCSAGIVPIQKGDKFSLNQCPKNELERKQMEQIPYASIVGSLMYAQTCTRPGISFAVGMLGRYQSNPGIDHWKAAKKVLRYLQGTKDRMLTYK-RSDHLEVIGYSDSDYAGCVDSRKSTFGYMFLLAEGAISWKSAKQ 365          
The following BLAST results are available for this feature:
BLAST of mRNA_F-serratus_M_contig1291.2153.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A438HUL4_VITVI2.570e-6037.32Retrovirus-related Pol polyprotein from transposon... [more]
A0A2N9IUC8_FAGSY2.910e-6038.98Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5JQD0_9PHAE3.400e-6035.00Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A060T044_PYCCI7.340e-6037.43Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JLN0_9PHAE1.790e-5936.94Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1Y1IVX6_KLENI2.510e-5936.99Integrase catalytic domain-containing protein (Fra... [more]
A0A1Y1IQX0_KLENI3.840e-5936.99Uncharacterized protein n=1 Tax=Klebsormidium nite... [more]
A0A438JMN5_VITVI7.370e-5936.99Retrovirus-related Pol polyprotein from transposon... [more]
A0A2P6S2B9_ROSCH8.500e-5935.90Putative RNA-directed DNA polymerase n=2 Tax=Rosa ... [more]
A0A4V1T029_9SPHI1.160e-5835.33Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
F-serratus_M_contig1291contigF-serratus_M_contig1291:183953..184978 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Fucus serratus MALE vs UniRef902022-09-19
OGS1.0 of Fucus serratus male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score72.0
Seed ortholog evalue2.4e-10
Seed eggNOG ortholog5217.XP_007000714.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3NUZ7@4751,3UY7N@5204,3VGMM@5234,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelTremellales
Best eggNOG OGNA|NA|NA
Exons1
Model size1026
Cds size405
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_F-serratus_M_contig1291.2153.1prot_F-serratus_M_contig1291.2153.1Fucus serratus malepolypeptideF-serratus_M_contig1291 184289..184693 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929234.515716-UTR-F-serratus_M_contig1291:183952..1842881622929234.515716-UTR-F-serratus_M_contig1291:183952..184288Fucus serratus maleUTRF-serratus_M_contig1291 183953..184288 +
1690962762.4430842-UTR-F-serratus_M_contig1291:183952..1842881690962762.4430842-UTR-F-serratus_M_contig1291:183952..184288Fucus serratus maleUTRF-serratus_M_contig1291 183953..184288 +
1622929234.5446196-UTR-F-serratus_M_contig1291:184693..1849781622929234.5446196-UTR-F-serratus_M_contig1291:184693..184978Fucus serratus maleUTRF-serratus_M_contig1291 184694..184978 +
1690962762.4643316-UTR-F-serratus_M_contig1291:184693..1849781690962762.4643316-UTR-F-serratus_M_contig1291:184693..184978Fucus serratus maleUTRF-serratus_M_contig1291 184694..184978 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929234.5318842-CDS-F-serratus_M_contig1291:184288..1846931622929234.5318842-CDS-F-serratus_M_contig1291:184288..184693Fucus serratus maleCDSF-serratus_M_contig1291 184289..184693 +
1690962762.4542148-CDS-F-serratus_M_contig1291:184288..1846931690962762.4542148-CDS-F-serratus_M_contig1291:184288..184693Fucus serratus maleCDSF-serratus_M_contig1291 184289..184693 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_F-serratus_M_contig1291.2153.1

>prot_F-serratus_M_contig1291.2153.1 ID=prot_F-serratus_M_contig1291.2153.1|Name=mRNA_F-serratus_M_contig1291.2153.1|organism=Fucus serratus male|type=polypeptide|length=135bp
MTAIEFEQTKADPSVFRKVVDGGAEMVVVVHVDDILAHAKDQATMDRFAS
ELGQKSRLKDMGDAGYYMACHIIMNRKARKLKFDQHLYVKSMVRRFDVNK
KAKIPLSKADEPRNPEEKEEIRKFPYQEAVGALM*
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mRNA from alignment at F-serratus_M_contig1291:183953..184978+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_F-serratus_M_contig1291.2153.1 ID=mRNA_F-serratus_M_contig1291.2153.1|Name=mRNA_F-serratus_M_contig1291.2153.1|organism=Fucus serratus male|type=mRNA|length=1026bp|location=Sequence derived from alignment at F-serratus_M_contig1291:183953..184978+ (Fucus serratus male)
AAAATCGGACAGGACGGCAATGTCGAGAAGTACAAGTGTCGACTTGTCGC TCAAGGGTTTTGGCAGGTGGAAGGTGTGCACTCCACGGAAACGTACTCGC CCACGCCATCCACCGCGTCAATCCGGATGCTTTTAGCGATGACAGCGGCT AAGGACGCAGAGCTGCGCCATTTCGACGCAGAGCAGGCATTTTTGAAGGC GGGTATTGACGAAGAAATATACATTGAGATCCCTGAGGAATTCCAGGAGT TTCCGGGGGCAGTGGGACGGCTAAACAAGGCCATTTACGGGCTCGTGCGG GCGGGGAGGTGCTGAAACAGTAAGTTTTGTGACGACATGACGGCGATTGA ATTCGAGCAGACAAAGGCGGACCCGTCCGTGTTCCGCAAGGTCGTTGACG GTGGGGCGGAGATGGTGGTGGTGGTACACGTAGACGACATCCTTGCCCAC GCCAAAGACCAAGCGACGATGGATAGATTCGCGTCTGAGCTTGGGCAGAA GTCCAGATTGAAGGACATGGGCGACGCCGGGTACTACATGGCCTGTCACA TAATAATGAACCGCAAGGCGCGCAAGTTGAAGTTCGACCAACACTTGTAC GTGAAGTCAATGGTAAGAAGATTTGACGTCAATAAGAAAGCTAAGATACC GCTCTCAAAGGCGGATGAACCGCGGAACCCAGAGGAGAAGGAGGAAATAA GGAAGTTCCCGTACCAAGAGGCAGTGGGGGCGCTCATGTAGACGGCGACG ATGACACGGCCGGATATTGCGTGCGCCGTACGCGCTGTGGCCAGGTTCTG CAAAAACCTTGGGCCGGCGCATAAGAAGGCAGTGATGAATATCTTCCACT ATCTCCTTCACACGAAACATTGGGGGATTACCTACGGTGGACAGGGCTGT GGACTTTGCATGGAAGCGTATACGGACTGGGATTTCGGAGGCTACCTGGA CACAAGACGGTCGATTTCGGGTGCGGTGTTGATGTTGGCGAAGGGAGCGA TCAGCTGGCACTCAAGGATGCAAGAA
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Coding sequence (CDS) from alignment at F-serratus_M_contig1291:183953..184978+

>mRNA_F-serratus_M_contig1291.2153.1 ID=mRNA_F-serratus_M_contig1291.2153.1|Name=mRNA_F-serratus_M_contig1291.2153.1|organism=Fucus serratus male|type=CDS|length=810bp|location=Sequence derived from alignment at F-serratus_M_contig1291:183953..184978+ (Fucus serratus male)
ATGACGGCGATTGAATTCGAGCAGACAAAGGCGGACCCGTCCGTGTTCCG
CAAGGTCGTTGACGGTGGGGCGGAGATGGTGGTGGTGGTACACGTAGACG
ACATCCTTGCCCACGCCAAAGACCAAGCGACGATGGATAGATTCGCGTCT
GAGCTTGGGCAGAAGTCCAGATTGAAGGACATGGGCGACGCCGGGTACTA
CATGGCCTGTCACATAATAATGAACCGCAAGGCGCGCAAGTTGAAGTTCG
ACCAACACTTGTACGTGAAGTCAATGGTAAGAAGATTTGACGTCAATAAG
AAAGCTAAGATACCGCTCTCAAAGGCGGATGAACCGCGGAACCCAGAGGA
GAAGGAGGAAATAAGGAAGTTCCCGTACCAAGAGGCAGTGGGGGCGCTCA
TGTAGATGACGGCGATTGAATTCGAGCAGACAAAGGCGGACCCGTCCGTG
TTCCGCAAGGTCGTTGACGGTGGGGCGGAGATGGTGGTGGTGGTACACGT
AGACGACATCCTTGCCCACGCCAAAGACCAAGCGACGATGGATAGATTCG
CGTCTGAGCTTGGGCAGAAGTCCAGATTGAAGGACATGGGCGACGCCGGG
TACTACATGGCCTGTCACATAATAATGAACCGCAAGGCGCGCAAGTTGAA
GTTCGACCAACACTTGTACGTGAAGTCAATGGTAAGAAGATTTGACGTCA
ATAAGAAAGCTAAGATACCGCTCTCAAAGGCGGATGAACCGCGGAACCCA
GAGGAGAAGGAGGAAATAAGGAAGTTCCCGTACCAAGAGGCAGTGGGGGC
GCTCATGTAG
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